RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 KRT2P35908 639 aa12.19□□□□□ -0.46
CUL4A-201ENST00000326335 SNAP25P60880 206 aa12.19□□□□□ -0.46
CUL4A-201ENST00000326335 INF2Q27J81 1249 aa12.19□□□□□ -0.46
CUL4A-201ENST00000326335 SGMS1Q86VZ5 419 aa12.19□□□□□ -0.46
CUL4A-201ENST00000326335 SYMPKQ92797 1274 aaKnown RBP12.19□□□□□ -0.46
CUL4A-201ENST00000326335 SFPQP23246 707 aaKnown RBP eCLIP12.18□□□□□ -0.46
CUL4A-201ENST00000326335 JAKMIP3Q5VZ66 844 aa12.18□□□□□ -0.46
CUL4A-201ENST00000326335 KIAA0825Q8IV33 1275 aa12.18□□□□□ -0.46
CUL4A-201ENST00000326335 AMOTL1Q8IY63 956 aa12.18□□□□□ -0.46
CUL4A-201ENST00000326335 WASF1Q92558 559 aa12.18□□□□□ -0.46
CUL4A-201ENST00000326335 ZSWIM4Q9H7M6 989 aa12.18□□□□□ -0.46
CUL4A-201ENST00000326335 NFE2L3Q9Y4A8 694 aa12.18□□□□□ -0.46
CUL4A-201ENST00000326335 LAMB4A4D0S4 1761 aa12.18□□□□□ -0.46
CUL4A-201ENST00000326335 SPEF2Q9C093 1822 aa12.18□□□□□ -0.46
CUL4A-201ENST00000326335 PTPAQ15257 358 aa12.18□□□□□ -0.46
CUL4A-201ENST00000326335 LRRC8AQ8IWT6 810 aa12.18□□□□□ -0.46
CUL4A-201ENST00000326335 SMARCE1Q969G3 411 aa12.18□□□□□ -0.46
CUL4A-201ENST00000326335 NUP188Q5SRE5 1749 aa12.18□□□□□ -0.46
CUL4A-201ENST00000326335 PDIA4P13667 645 aaKnown RBP12.18□□□□□ -0.46
CUL4A-201ENST00000326335 TAL1P17542 331 aaPredicted RBP12.18□□□□□ -0.46
CUL4A-201ENST00000326335 SLC16A2P36021 539 aa12.18□□□□□ -0.46
CUL4A-201ENST00000326335 VPS72Q15906 364 aa12.18□□□□□ -0.46
CUL4A-201ENST00000326335 SHROOM1Q2M3G4 852 aaPredicted RBP12.18□□□□□ -0.46
CUL4A-201ENST00000326335 BARGINQ6ZT62 677 aa12.18□□□□□ -0.46
CUL4A-201ENST00000326335 DESI2Q9BSY9 194 aa12.18□□□□□ -0.46
CUL4A-201ENST00000326335 BRMS1Q9HCU9 246 aa12.18□□□□□ -0.46
CUL4A-201ENST00000326335 AKAP11Q9UKA4 1901 aa12.17□□□□□ -0.46
CUL4A-201ENST00000326335 A0A087X0B3 334 aa12.17□□□□□ -0.46
CUL4A-201ENST00000326335 CBX1P83916 185 aa12.17□□□□□ -0.46
CUL4A-201ENST00000326335 FMR1Q06787 632 aaKnown RBP eCLIP12.17□□□□□ -0.46
CUL4A-201ENST00000326335 IKQ13123 557 aaPredicted RBP12.17□□□□□ -0.46
CUL4A-201ENST00000326335 KARSQ15046 597 aaKnown RBP12.17□□□□□ -0.46
CUL4A-201ENST00000326335 LETM2Q2VYF4 491 aa12.17□□□□□ -0.46
CUL4A-201ENST00000326335 KRBA2Q6ZNG9 492 aa12.17□□□□□ -0.46
CUL4A-201ENST00000326335 PLA2G4DQ86XP0 818 aa12.17□□□□□ -0.46
CUL4A-201ENST00000326335 MAP3K14Q99558 947 aa12.17□□□□□ -0.46
CUL4A-201ENST00000326335 SHANK3Q9BYB0 1731 aa12.17□□□□□ -0.46
CUL4A-201ENST00000326335 EVCP57679 992 aa12.17□□□□□ -0.46
CUL4A-201ENST00000326335 POSTNQ15063 836 aa12.17□□□□□ -0.46
CUL4A-201ENST00000326335 FBXO33Q7Z6M2 555 aa12.17□□□□□ -0.46
CUL4A-201ENST00000326335 ZNF512BQ96KM6 892 aaPredicted RBP12.17□□□□□ -0.46
CUL4A-201ENST00000326335 GGA1Q9UJY5 639 aa12.17□□□□□ -0.46
CUL4A-201ENST00000326335 NLRP12P59046 1061 aa12.16□□□□□ -0.46
CUL4A-201ENST00000326335 ZFP91Q96JP5 570 aaPredicted RBP12.16□□□□□ -0.46
CUL4A-201ENST00000326335 POLD4Q9HCU8 107 aa12.16□□□□□ -0.46
CUL4A-201ENST00000326335 TPM2P07951 284 aa12.16□□□□□ -0.46
CUL4A-201ENST00000326335 TROAPQ12815 778 aa12.16□□□□□ -0.46
CUL4A-201ENST00000326335 PKN1Q16512 942 aa12.16□□□□□ -0.46
CUL4A-201ENST00000326335 TTC38Q5R3I4 469 aa12.16□□□□□ -0.46
CUL4A-201ENST00000326335 ANKRD2Q9GZV1 360 aa12.16□□□□□ -0.46
CUL4A-201ENST00000326335 NWD2Q9ULI1 1742 aa12.16□□□□□ -0.46
CUL4A-201ENST00000326335 CCDC194A0A1B0GVG4 234 aa12.16□□□□□ -0.46
CUL4A-201ENST00000326335 SSBP05455 408 aaKnown RBP eCLIP12.16□□□□□ -0.46
CUL4A-201ENST00000326335 BMP6P22004 513 aa12.16□□□□□ -0.46
CUL4A-201ENST00000326335 ST5P78524 1137 aa12.16□□□□□ -0.46
CUL4A-201ENST00000326335 RAD51AP2Q09MP3 1159 aa12.16□□□□□ -0.46
CUL4A-201ENST00000326335 SEC23AQ15436 765 aa12.16□□□□□ -0.46
CUL4A-201ENST00000326335 PTPN14Q15678 1187 aa12.16□□□□□ -0.46
CUL4A-201ENST00000326335 SYT10Q6XYQ8 523 aa12.16□□□□□ -0.46
CUL4A-201ENST00000326335 ZNF804AQ7Z570 1209 aa12.16□□□□□ -0.46
CUL4A-201ENST00000326335 BIN2Q9UBW5 565 aaPredicted RBP12.16□□□□□ -0.46
CUL4A-201ENST00000326335 POLLQ9UGP5 575 aa12.16□□□□□ -0.46
CUL4A-201ENST00000326335 MARCH6O60337 910 aa12.15□□□□□ -0.46
CUL4A-201ENST00000326335 APBA3O96018 575 aa12.15□□□□□ -0.46
CUL4A-201ENST00000326335 ALX1Q15699 326 aa12.15□□□□□ -0.46
CUL4A-201ENST00000326335 TOP1P11387 765 aaKnown RBP12.15□□□□□ -0.46
CUL4A-201ENST00000326335 TM4SF1P30408 202 aa12.15□□□□□ -0.46
CUL4A-201ENST00000326335 TYW1BQ6NUM6 668 aa12.15□□□□□ -0.46
CUL4A-201ENST00000326335 TMTC2Q8N394 836 aa12.15□□□□□ -0.46
CUL4A-201ENST00000326335 COA7Q96BR5 231 aa12.15□□□□□ -0.46
CUL4A-201ENST00000326335 CD209Q9NNX6 404 aa12.15□□□□□ -0.46
CUL4A-201ENST00000326335 PNPLA7Q6ZV29 1317 aa12.15□□□□□ -0.46
CUL4A-201ENST00000326335 LRP6O75581 1613 aa12.15□□□□□ -0.46
CUL4A-201ENST00000326335 A0A1W2PQ27 194 aa12.15□□□□□ -0.46
CUL4A-201ENST00000326335 A0A1W2PQ64 194 aa12.15□□□□□ -0.46
CUL4A-201ENST00000326335 A0A1W2PQD8 194 aa12.15□□□□□ -0.46
CUL4A-201ENST00000326335 BAG3O95817 575 aa12.15□□□□□ -0.46
CUL4A-201ENST00000326335 NAPAP54920 295 aa12.15□□□□□ -0.46
CUL4A-201ENST00000326335 GRAPQ13588 217 aa12.15□□□□□ -0.46
CUL4A-201ENST00000326335 CCDC96Q2M329 555 aa12.15□□□□□ -0.46
CUL4A-201ENST00000326335 RILPL1Q5EBL4 403 aa12.15□□□□□ -0.46
CUL4A-201ENST00000326335 GRAPLQ8TC17 118 aaPredicted RBP12.15□□□□□ -0.46
CUL4A-201ENST00000326335 HPS3Q969F9 1004 aa12.15□□□□□ -0.46
CUL4A-201ENST00000326335 EYA3Q99504 573 aa12.15□□□□□ -0.46
CUL4A-201ENST00000326335 IL17RBQ9NRM6 502 aa12.15□□□□□ -0.46
CUL4A-201ENST00000326335 TTF2Q9UNY4 1162 aaKnown RBP12.15□□□□□ -0.46
CUL4A-201ENST00000326335 CUTAO60888 179 aa12.14□□□□□ -0.47
CUL4A-201ENST00000326335 GYS1P13807 737 aa12.14□□□□□ -0.47
CUL4A-201ENST00000326335 CEP135Q66GS9 1140 aa12.14□□□□□ -0.47
CUL4A-201ENST00000326335 ZC3H12CQ9C0D7 883 aaKnown RBP12.14□□□□□ -0.47
CUL4A-201ENST00000326335 VPS16Q9H269 839 aa12.14□□□□□ -0.47
CUL4A-201ENST00000326335 MAN1B1Q9UKM7 699 aa12.14□□□□□ -0.47
CUL4A-201ENST00000326335 UBR2Q8IWV8 1755 aa12.14□□□□□ -0.47
CUL4A-201ENST00000326335 U2AF2P26368 475 aaKnown RBP eCLIP12.14□□□□□ -0.479e-8■■■■□ 22.4
CUL4A-201ENST00000326335 MYL5Q02045 173 aa12.14□□□□□ -0.47
CUL4A-201ENST00000326335 AEBP2Q6ZN18 517 aaPredicted RBP12.14□□□□□ -0.47
CUL4A-201ENST00000326335 CCDC112Q8NEF3 446 aa12.14□□□□□ -0.47
CUL4A-201ENST00000326335 FBXO2Q9UK22 296 aaPredicted RBP12.14□□□□□ -0.47
CUL4A-201ENST00000326335 CTNND2Q9UQB3 1225 aa12.14□□□□□ -0.47
CUL4A-201ENST00000326335 FAM205AQ6ZU69 1335 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms