RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 CDC5LQ99459 802 aaKnown RBP22.7■■□□□ 1.22
SOX2-201ENST00000325404 BAG1Q99933 345 aaPredicted RBP22.7■■□□□ 1.22
SOX2-201ENST00000325404 ERCC6LQ2NKX8 1250 aa22.69■■□□□ 1.22
SOX2-201ENST00000325404 SETDB2Q96T68 719 aa22.69■■□□□ 1.22
SOX2-201ENST00000325404 NYXQ9GZU5 481 aa22.69■■□□□ 1.22
SOX2-201ENST00000325404 PPP2R2CQ9Y2T4 447 aa22.69■■□□□ 1.22
SOX2-201ENST00000325404 BCAMP50895 628 aa22.69■■□□□ 1.22
SOX2-201ENST00000325404 BMS1Q14692 1282 aaKnown RBP22.69■■□□□ 1.22
SOX2-201ENST00000325404 LRP2BPQ9P2M1 347 aa22.69■■□□□ 1.22
SOX2-201ENST00000325404 GRIN1Q05586 938 aa22.68■■□□□ 1.22
SOX2-201ENST00000325404 FMR1Q06787 632 aaKnown RBP eCLIP22.68■■□□□ 1.22
SOX2-201ENST00000325404 SF3B3Q15393 1217 aaKnown RBP22.68■■□□□ 1.22
SOX2-201ENST00000325404 ARHGEF1Q92888 912 aaKnown RBP22.68■■□□□ 1.22
SOX2-201ENST00000325404 TOMM22Q9NS69 142 aa22.68■■□□□ 1.22
SOX2-201ENST00000325404 ZNF804BA4D1E1 1349 aa22.68■■□□□ 1.22
SOX2-201ENST00000325404 TAF1LQ8IZX4 1826 aa22.68■■□□□ 1.22
SOX2-201ENST00000325404 CDK11BP21127 795 aaKnown RBP22.68■■□□□ 1.22
SOX2-201ENST00000325404 CREBRFQ8IUR6 639 aa22.68■■□□□ 1.22
SOX2-201ENST00000325404 TC2NQ8N9U0 490 aa22.68■■□□□ 1.22
SOX2-201ENST00000325404 VWA3AA6NCI4 1184 aa22.67■■□□□ 1.22
SOX2-201ENST00000325404 TRIM75PA6NK02 468 aa22.67■■□□□ 1.22
SOX2-201ENST00000325404 EFCAB8A8MWE9 144 aa22.67■■□□□ 1.22
SOX2-201ENST00000325404 PRPF3O43395 683 aaKnown RBP22.67■■□□□ 1.22
SOX2-201ENST00000325404 NR5A1Q13285 461 aa22.67■■□□□ 1.22
SOX2-201ENST00000325404 NR1I3Q14994 352 aa22.67■■□□□ 1.22
SOX2-201ENST00000325404 SPECC1Q5M775 1068 aa22.67■■□□□ 1.22
SOX2-201ENST00000325404 FAM196AQ6ZSG2 479 aa22.67■■□□□ 1.22
SOX2-201ENST00000325404 FERMT2Q96AC1 680 aa22.67■■□□□ 1.22
SOX2-201ENST00000325404 ZKSCAN3Q9BRR0 538 aa22.67■■□□□ 1.22
SOX2-201ENST00000325404 RBM28Q9NW13 759 aaKnown RBP22.67■■□□□ 1.22
SOX2-201ENST00000325404 PRR29P0C7W0 189 aa22.67■■□□□ 1.22
SOX2-201ENST00000325404 AKAP17AQ02040 695 aaKnown RBP22.67■■□□□ 1.22
SOX2-201ENST00000325404 SLC10A5Q5PT55 438 aa22.67■■□□□ 1.22
SOX2-201ENST00000325404 SH3RF1Q7Z6J0 888 aa22.67■■□□□ 1.22
SOX2-201ENST00000325404 PHF20Q9BVI0 1012 aa22.67■■□□□ 1.22
SOX2-201ENST00000325404 A0A1B0GTH6 734 aa22.66■■□□□ 1.22
SOX2-201ENST00000325404 FGRP09769 529 aa22.66■■□□□ 1.22
SOX2-201ENST00000325404 KRT27Q7Z3Y8 459 aa22.66■■□□□ 1.22
SOX2-201ENST00000325404 AMIGO3Q86WK7 504 aa22.66■■□□□ 1.22
SOX2-201ENST00000325404 NBPF5PQ86XG9 351 aaPredicted RBP22.66■■□□□ 1.22
SOX2-201ENST00000325404 CSRNP2Q9H175 543 aa22.66■■□□□ 1.22
SOX2-201ENST00000325404 ZNF446Q9NWS9 450 aa22.66■■□□□ 1.22
SOX2-201ENST00000325404 SEMA3EO15041 775 aa22.66■■□□□ 1.22
SOX2-201ENST00000325404 CALM1P0DP23 149 aa22.66■■□□□ 1.22
SOX2-201ENST00000325404 CALM2P0DP24 149 aa22.66■■□□□ 1.22
SOX2-201ENST00000325404 CALM3P0DP25 149 aa22.66■■□□□ 1.22
SOX2-201ENST00000325404 CYP7A1P22680 504 aa22.66■■□□□ 1.22
SOX2-201ENST00000325404 UBXN4Q92575 508 aa22.66■■□□□ 1.22
SOX2-201ENST00000325404 CABP5Q9NP86 173 aa22.66■■□□□ 1.22
SOX2-201ENST00000325404 ARGLU1Q9NWB6 273 aaPredicted RBP22.66■■□□□ 1.22
SOX2-201ENST00000325404 RAI14Q9P0K7 980 aa22.66■■□□□ 1.22
SOX2-201ENST00000325404 PARP3Q9Y6F1 533 aa22.66■■□□□ 1.22
SOX2-201ENST00000325404 TNKSO95271 1327 aa22.65■■□□□ 1.22
SOX2-201ENST00000325404 TADA3O75528 432 aa22.65■■□□□ 1.22
SOX2-201ENST00000325404 SLFN14P0C7P3 912 aa22.65■■□□□ 1.22
SOX2-201ENST00000325404 RFC4P35249 363 aa22.65■■□□□ 1.22
SOX2-201ENST00000325404 FUT2Q10981 343 aa22.65■■□□□ 1.22
SOX2-201ENST00000325404 TRAPPC3LQ5T215 181 aa22.65■■□□□ 1.22
SOX2-201ENST00000325404 C3orf67Q6ZVT6 689 aa22.65■■□□□ 1.22
SOX2-201ENST00000325404 OXER1Q8TDS5 423 aa22.65■■□□□ 1.22
SOX2-201ENST00000325404 MAGEB6P1A0A0J9YX57 407 aa22.65■■□□□ 1.22
SOX2-201ENST00000325404 KRT2P35908 639 aa22.65■■□□□ 1.22
SOX2-201ENST00000325404 CHRNDQ07001 517 aa22.65■■□□□ 1.22
SOX2-201ENST00000325404 TMED8Q6PL24 325 aaPredicted RBP22.65■■□□□ 1.22
SOX2-201ENST00000325404 ANKRD18AQ8IVF6 992 aa22.65■■□□□ 1.22
SOX2-201ENST00000325404 NUP133Q8WUM0 1156 aa22.65■■□□□ 1.22
SOX2-201ENST00000325404 PANX2Q96RD6 677 aa22.65■■□□□ 1.22
SOX2-201ENST00000325404 BRIP1Q9BX63 1249 aa22.65■■□□□ 1.22
SOX2-201ENST00000325404 GNL3LQ9NVN8 582 aaKnown RBP22.65■■□□□ 1.22
SOX2-201ENST00000325404 SNAP23O00161 211 aa22.64■■□□□ 1.22
SOX2-201ENST00000325404 PKN1Q16512 942 aa22.64■■□□□ 1.22
SOX2-201ENST00000325404 ARHGAP29Q52LW3 1261 aa22.64■■□□□ 1.22
SOX2-201ENST00000325404 SPATA1Q5VX52 437 aa22.64■■□□□ 1.22
SOX2-201ENST00000325404 MNS1Q8NEH6 495 aa22.64■■□□□ 1.22
SOX2-201ENST00000325404 MED15Q96RN5 788 aa22.64■■□□□ 1.22
SOX2-201ENST00000325404 ZSCAN10Q96SZ4 725 aaPredicted RBP22.64■■□□□ 1.22
SOX2-201ENST00000325404 ATP8B1O43520 1251 aa22.64■■□□□ 1.21
SOX2-201ENST00000325404 NAA15Q9BXJ9 866 aaKnown RBP22.64■■□□□ 1.21
SOX2-201ENST00000325404 LRRC4BQ9NT99 713 aa22.64■■□□□ 1.21
SOX2-201ENST00000325404 TPTE2Q6XPS3 522 aa22.63■■□□□ 1.21
SOX2-201ENST00000325404 MIGA1Q8NAN2 632 aa22.63■■□□□ 1.21
SOX2-201ENST00000325404 GSDMAQ96QA5 445 aa22.63■■□□□ 1.21
SOX2-201ENST00000325404 RIOK1Q9BRS2 568 aaKnown RBP22.63■■□□□ 1.21
SOX2-201ENST00000325404 CLCN6P51797 869 aa22.63■■□□□ 1.21
SOX2-201ENST00000325404 MAP3K9P80192 1104 aa22.63■■□□□ 1.21
SOX2-201ENST00000325404 TERF2Q15554 542 aa22.63■■□□□ 1.21
SOX2-201ENST00000325404 CATIPQ7Z7H3 387 aa22.63■■□□□ 1.21
SOX2-201ENST00000325404 LRRN4CLQ8ND94 238 aa22.63■■□□□ 1.21
SOX2-201ENST00000325404 CTAGE1Q96RT6 745 aa22.63■■□□□ 1.21
SOX2-201ENST00000325404 TAOK2Q9UL54 1235 aa22.63■■□□□ 1.21
SOX2-201ENST00000325404 FANCGO15287 622 aa22.62■■□□□ 1.21
SOX2-201ENST00000325404 URI1O94763 535 aaPredicted RBP22.62■■□□□ 1.21
SOX2-201ENST00000325404 BRMS1Q9HCU9 246 aa22.62■■□□□ 1.21
SOX2-201ENST00000325404 COL24A1Q17RW2 1714 aa22.62■■□□□ 1.21
SOX2-201ENST00000325404 DDAH1O94760 285 aa22.62■■□□□ 1.21
SOX2-201ENST00000325404 CASQ1P31415 396 aa22.62■■□□□ 1.21
SOX2-201ENST00000325404 UBE4AQ14139 1066 aa22.62■■□□□ 1.21
SOX2-201ENST00000325404 ENAHQ8N8S7 591 aaPredicted RBP22.62■■□□□ 1.21
SOX2-201ENST00000325404 NLRP3Q96P20 1036 aa22.62■■□□□ 1.21
SOX2-201ENST00000325404 PYM1Q9BRP8 204 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms