RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 SSC5DA1L4H1 1573 aa17.92■□□□□ 0.46
PRPF3-201ENST00000324862 CCDC69A6NI79 296 aa17.92■□□□□ 0.46
PRPF3-201ENST00000324862 EVCP57679 992 aa17.92■□□□□ 0.46
PRPF3-201ENST00000324862 ATP2B2Q01814 1243 aa17.92■□□□□ 0.46
PRPF3-201ENST00000324862 NUP133Q8WUM0 1156 aa17.92■□□□□ 0.46
PRPF3-201ENST00000324862 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.92■□□□□ 0.46
PRPF3-201ENST00000324862 SLC12A7Q9Y666 1083 aa17.92■□□□□ 0.46
PRPF3-201ENST00000324862 WDR90Q96KV7 1748 aa17.92■□□□□ 0.46
PRPF3-201ENST00000324862 PHF20L1A8MW92 1017 aa17.91■□□□□ 0.46
PRPF3-201ENST00000324862 ABCB5Q2M3G0 1257 aa17.91■□□□□ 0.46
PRPF3-201ENST00000324862 CMTR1Q8N1G2 835 aaKnown RBP17.91■□□□□ 0.46
PRPF3-201ENST00000324862 TMEM47Q9BQJ4 181 aa17.91■□□□□ 0.46
PRPF3-201ENST00000324862 MTMR4Q9NYA4 1195 aa17.91■□□□□ 0.46
PRPF3-201ENST00000324862 PITPNM2Q9BZ72 1349 aa17.91■□□□□ 0.46
PRPF3-201ENST00000324862 IGKV6D-41A0A0C4DH26 115 aa17.91■□□□□ 0.46
PRPF3-201ENST00000324862 CDC27P30260 824 aa17.91■□□□□ 0.46
PRPF3-201ENST00000324862 INPP5BP32019 993 aa17.91■□□□□ 0.46
PRPF3-201ENST00000324862 ADD1P35611 737 aaKnown RBP17.91■□□□□ 0.46
PRPF3-201ENST00000324862 CUL4AQ13619 759 aa17.91■□□□□ 0.46
PRPF3-201ENST00000324862 ZNF654Q8IZM8 581 aa17.91■□□□□ 0.46
PRPF3-201ENST00000324862 LRRC47Q8N1G4 583 aaKnown RBP17.91■□□□□ 0.46
PRPF3-201ENST00000324862 GTF3C6Q969F1 213 aa17.91■□□□□ 0.46
PRPF3-201ENST00000324862 VEGFAP15692 232 aaPredicted RBP17.9■□□□□ 0.46
PRPF3-201ENST00000324862 MAP3K10Q02779 954 aa17.9■□□□□ 0.46
PRPF3-201ENST00000324862 SIAH1Q8IUQ4 282 aa17.9■□□□□ 0.46
PRPF3-201ENST00000324862 TCP11L1Q9NUJ3 509 aa17.9■□□□□ 0.46
PRPF3-201ENST00000324862 TRAF5O00463 557 aa17.9■□□□□ 0.46
PRPF3-201ENST00000324862 TBC1D12O60347 775 aa17.9■□□□□ 0.46
PRPF3-201ENST00000324862 JAK2O60674 1132 aa17.9■□□□□ 0.46
PRPF3-201ENST00000324862 PFKFB2O60825 505 aa17.9■□□□□ 0.46
PRPF3-201ENST00000324862 ZNF274Q96GC6 653 aaPredicted RBP17.9■□□□□ 0.46
PRPF3-201ENST00000324862 ZSCAN31Q96LW9 406 aaPredicted RBP17.9■□□□□ 0.46
PRPF3-201ENST00000324862 CLIP2Q9UDT6 1046 aa17.9■□□□□ 0.46
PRPF3-201ENST00000324862 ZBTB43O43298 467 aa17.89■□□□□ 0.45
PRPF3-201ENST00000324862 CTDNEP1O95476 244 aa17.89■□□□□ 0.45
PRPF3-201ENST00000324862 MOB2Q70IA6 237 aa17.89■□□□□ 0.45
PRPF3-201ENST00000324862 PNMA8AQ86V59 439 aaPredicted RBP17.89■□□□□ 0.45
PRPF3-201ENST00000324862 ZKSCAN4Q969J2 545 aaPredicted RBP17.89■□□□□ 0.45
PRPF3-201ENST00000324862 SH2B1Q9NRF2 756 aaPredicted RBP17.89■□□□□ 0.45
PRPF3-201ENST00000324862 FAM217BQ9NTX9 383 aaPredicted RBP17.89■□□□□ 0.45
PRPF3-201ENST00000324862 SCN4AP35499 1836 aa17.89■□□□□ 0.45
PRPF3-201ENST00000324862 PLIN4Q96Q06 1357 aa17.89■□□□□ 0.45
PRPF3-201ENST00000324862 TROAPQ12815 778 aa17.89■□□□□ 0.45
PRPF3-201ENST00000324862 DGKHQ86XP1 1220 aa17.89■□□□□ 0.45
PRPF3-201ENST00000324862 CCDC82Q8N4S0 544 aa17.89■□□□□ 0.45
PRPF3-201ENST00000324862 PNMA1Q8ND90 353 aa17.89■□□□□ 0.45
PRPF3-201ENST00000324862 ZC3H15Q8WU90 426 aaKnown RBP17.89■□□□□ 0.45
PRPF3-201ENST00000324862 CCDC17Q96LX7 622 aa17.89■□□□□ 0.45
PRPF3-201ENST00000324862 UBE2Q2LH0YL09 131 aa17.88■□□□□ 0.45
PRPF3-201ENST00000324862 EEF2P13639 858 aaKnown RBP17.88■□□□□ 0.45
PRPF3-201ENST00000324862 CAP2P40123 477 aa17.88■□□□□ 0.45
PRPF3-201ENST00000324862 METAP2P50579 478 aaKnown RBP eCLIP17.88■□□□□ 0.45
PRPF3-201ENST00000324862 KAT14Q9H8E8 782 aa17.88■□□□□ 0.45
PRPF3-201ENST00000324862 ZBTB21Q9ULJ3 1066 aa17.88■□□□□ 0.45
PRPF3-201ENST00000324862 ECE1P42892 770 aa17.88■□□□□ 0.45
PRPF3-201ENST00000324862 CDCA5Q96FF9 252 aa17.88■□□□□ 0.45
PRPF3-201ENST00000324862 WRNIP1Q96S55 665 aa17.88■□□□□ 0.45
PRPF3-201ENST00000324862 MTA3Q9BTC8 594 aa17.88■□□□□ 0.45
PRPF3-201ENST00000324862 TAOK2Q9UL54 1235 aa17.88■□□□□ 0.45
PRPF3-201ENST00000324862 A0A1W2PRG0 241 aa17.87■□□□□ 0.45
PRPF3-201ENST00000324862 GOLGA8AA7E2F4 631 aa17.87■□□□□ 0.45
PRPF3-201ENST00000324862 TMEM179Q6ZVK1 233 aa17.87■□□□□ 0.45
PRPF3-201ENST00000324862 DDX11Q96FC9 970 aa17.87■□□□□ 0.45
PRPF3-201ENST00000324862 MYH8P13535 1937 aa17.87■□□□□ 0.45
PRPF3-201ENST00000324862 RAD21O60216 631 aa17.87■□□□□ 0.45
PRPF3-201ENST00000324862 GOLGA8HP0CJ92 632 aa17.87■□□□□ 0.45
PRPF3-201ENST00000324862 NOVP48745 357 aa17.87■□□□□ 0.45
PRPF3-201ENST00000324862 ICA1Q05084 483 aa17.87■□□□□ 0.45
PRPF3-201ENST00000324862 ACER1Q8TDN7 264 aa17.87■□□□□ 0.45
PRPF3-201ENST00000324862 PPP2R3BQ9Y5P8 575 aa17.87■□□□□ 0.45
PRPF3-201ENST00000324862 TTLL1O95922 423 aa17.86■□□□□ 0.45
PRPF3-201ENST00000324862 CATIPQ7Z7H3 387 aa17.86■□□□□ 0.45
PRPF3-201ENST00000324862 TMTC2Q8N394 836 aa17.86■□□□□ 0.45
PRPF3-201ENST00000324862 ANKS1AQ92625 1134 aa17.86■□□□□ 0.45
PRPF3-201ENST00000324862 CPVLQ9H3G5 476 aa17.86■□□□□ 0.45
PRPF3-201ENST00000324862 USP2O75604 605 aaPredicted RBP17.86■□□□□ 0.45
PRPF3-201ENST00000324862 DGKZQ13574 1117 aa17.86■□□□□ 0.45
PRPF3-201ENST00000324862 PKP1Q13835 747 aa17.86■□□□□ 0.45
PRPF3-201ENST00000324862 CDC37L1Q7L3B6 337 aa17.86■□□□□ 0.45
PRPF3-201ENST00000324862 STAG2Q8N3U4 1231 aa17.86■□□□□ 0.45
PRPF3-201ENST00000324862 FANCBQ8NB91 859 aa17.86■□□□□ 0.45
PRPF3-201ENST00000324862 PHKBQ93100 1093 aa17.86■□□□□ 0.45
PRPF3-201ENST00000324862 ZNF408Q9H9D4 720 aa17.86■□□□□ 0.45
PRPF3-201ENST00000324862 CABP5Q9NP86 173 aa17.86■□□□□ 0.45
PRPF3-201ENST00000324862 PLEKHA8P1O95397 391 aa17.85■□□□□ 0.45
PRPF3-201ENST00000324862 SYNE3Q6ZMZ3 975 aa17.85■□□□□ 0.45
PRPF3-201ENST00000324862 NSUN7Q8NE18 718 aaKnown RBP17.85■□□□□ 0.45
PRPF3-201ENST00000324862 IL27Q8NEV9 243 aa17.85■□□□□ 0.45
PRPF3-201ENST00000324862 KLRG1Q96E93 195 aa17.85■□□□□ 0.45
PRPF3-201ENST00000324862 KANSL2Q9H9L4 492 aa17.85■□□□□ 0.45
PRPF3-201ENST00000324862 ZYXQ15942 572 aaKnown RBP17.84■□□□□ 0.45
PRPF3-201ENST00000324862 SUPT20HL1Q3ZLR7 823 aa17.84■□□□□ 0.45
PRPF3-201ENST00000324862 USP17L2Q6R6M4 530 aa17.84■□□□□ 0.45
PRPF3-201ENST00000324862 NBPF11Q86T75 865 aa17.84■□□□□ 0.45
PRPF3-201ENST00000324862 ZNF341Q9BYN7 854 aa17.84■□□□□ 0.45
PRPF3-201ENST00000324862 USP17L5A8MUK1 530 aa17.84■□□□□ 0.45
PRPF3-201ENST00000324862 TOP1P11387 765 aaKnown RBP17.84■□□□□ 0.45
PRPF3-201ENST00000324862 GJB2P29033 226 aa17.84■□□□□ 0.45
PRPF3-201ENST00000324862 RTN1Q16799 776 aa17.84■□□□□ 0.45
PRPF3-201ENST00000324862 DCAF15Q66K64 600 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms