RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 CCDC155Q8N6L0 562 aa13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 SMC1BQ8NDV3 1235 aa13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 ARHGEF12Q9NZN5 1544 aa13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 GOLGA8HP0CJ92 632 aa13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 SDSP20132 328 aa13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 YY1P25490 414 aa13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 LIG4P49917 911 aa13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 METTL23Q86XA0 190 aa13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 ELMOD1Q8N336 334 aa13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 SEPT9Q9UHD8 586 aaPredicted RBP13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 USTQ9Y2C2 406 aa13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 SASH1O94885 1247 aa13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 SLFN13Q68D06 897 aa13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 FBXO11Q86XK2 927 aa13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 TRERF1Q96PN7 1200 aa13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 CKAP4Q07065 602 aaKnown RBP13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 KIAA1524Q8TCG1 905 aa13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 SNX29Q8TEQ0 813 aa13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 MARK3P27448 753 aa13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 STX1AQ16623 288 aa13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 G2E3Q7L622 706 aa13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 FBF1Q8TES7 1133 aa13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 MRPL44Q9H9J2 332 aaKnown RBP13.74□□□□□ -0.21
CACNA1F-201ENST00000323022 SDR42E1Q8WUS8 393 aa13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 LEO1Q8WVC0 666 aaPredicted RBP13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 FAM49AQ9H0Q0 323 aaPredicted RBP13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 INPP5FQ9Y2H2 1132 aa13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 DYMQ7RTS9 669 aa13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 WRNIP1Q96S55 665 aa13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 MTIF3Q9H2K0 278 aaKnown RBP13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 TRMT1Q9NXH9 659 aaKnown RBP13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 USP17L12C9JPN9 530 aa13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 USP17L21D6R901 530 aa13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 TNPO2O14787 897 aaKnown RBP13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 CALUO43852 315 aaPredicted RBP13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 BBOX1O75936 387 aa13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 CALCRLQ16602 461 aa13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 CCDC157Q569K6 752 aa13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 SUCLG2Q96I99 432 aa13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 HACL1Q9UJ83 578 aa13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 STK10O94804 968 aaKnown RBP13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 PPFIA1Q13136 1202 aa13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 CARD14Q9BXL6 1004 aa13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 DDX19AQ9NUU7 478 aaKnown RBP13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 ZNF215Q9UL58 517 aaPredicted RBP13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 TXNRD1Q16881 649 aa13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 SND1Q7KZF4 910 aaKnown RBP eCLIP13.73□□□□□ -0.21
CACNA1F-201ENST00000323022 MYO5CQ9NQX4 1742 aa13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 KCNJ6P48051 423 aa13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 GSDMDP57764 484 aa13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 TIGD1Q96MW7 591 aa13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 GTPBP4Q9BZE4 634 aaKnown RBP13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 CACYBPQ9HB71 228 aaKnown RBP13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 ARPP21Q9UBL0 812 aaPredicted RBP13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 CCDC85CA6NKD9 419 aa13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 TLR3O15455 904 aaKnown RBP13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 TNNC2P02585 160 aa13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 PDE1AP54750 535 aa13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 CEP57Q86XR8 500 aa13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 EHBP1Q8NDI1 1231 aa13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 EXOC3O60645 756 aa13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 UAP1Q16222 522 aaPredicted RBP13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 BRINP3Q76B58 766 aa13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 FASTKD5Q7L8L6 764 aaKnown RBP13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 RASAL2Q9UJF2 1139 aa13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 ZFYVE9O95405 1425 aa13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 BICDL2A1A5D9 508 aa13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 RSRC2Q7L4I2 434 aaKnown RBP13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 HELLSQ9NRZ9 838 aa13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 ZHX2Q9Y6X8 837 aa13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 ATP2A1O14983 1001 aa13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 POLR3GO15318 223 aaPredicted RBP13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 PLCB4Q15147 1175 aa13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 SKAP1Q86WV1 359 aa13.72□□□□□ -0.21
CACNA1F-201ENST00000323022 KBTBD13C9JR72 458 aa13.71□□□□□ -0.21
CACNA1F-201ENST00000323022 FAM107BQ9H098 131 aa13.71□□□□□ -0.21
CACNA1F-201ENST00000323022 PCDHA1Q9Y5I3 950 aa13.71□□□□□ -0.21
CACNA1F-201ENST00000323022 CELF2O95319 508 aaKnown RBP13.71□□□□□ -0.21
CACNA1F-201ENST00000323022 LRMPQ12912 555 aa13.71□□□□□ -0.21
CACNA1F-201ENST00000323022 NONOQ15233 471 aaKnown RBP eCLIP13.71□□□□□ -0.21
CACNA1F-201ENST00000323022 DCUN1D2Q6PH85 259 aa13.71□□□□□ -0.21
CACNA1F-201ENST00000323022 TBC1D31Q96DN5 1066 aa13.71□□□□□ -0.21
CACNA1F-201ENST00000323022 PSTPIP2Q9H939 334 aa13.71□□□□□ -0.21
CACNA1F-201ENST00000323022 NEMFO60524 1076 aa13.71□□□□□ -0.21
CACNA1F-201ENST00000323022 TAF1CQ15572 869 aaPredicted RBP13.71□□□□□ -0.21
CACNA1F-201ENST00000323022 POLR3AO14802 1390 aaPredicted RBP13.71□□□□□ -0.21
CACNA1F-201ENST00000323022 PALLDQ8WX93 1383 aa13.71□□□□□ -0.21
CACNA1F-201ENST00000323022 COL17A1Q9UMD9 1497 aaPredicted RBP13.71□□□□□ -0.21
CACNA1F-201ENST00000323022 KCNQ3O43525 872 aa13.71□□□□□ -0.22
CACNA1F-201ENST00000323022 HSF2BPO75031 334 aa13.71□□□□□ -0.22
CACNA1F-201ENST00000323022 NKX1-1Q15270 411 aaPredicted RBP13.71□□□□□ -0.22
CACNA1F-201ENST00000323022 FAM117BQ6P1L5 589 aa13.71□□□□□ -0.22
CACNA1F-201ENST00000323022 SCYL2Q6P3W7 929 aa13.71□□□□□ -0.22
CACNA1F-201ENST00000323022 YAF2Q8IY57 180 aa13.71□□□□□ -0.22
CACNA1F-201ENST00000323022 MAP3K15Q6ZN16 1313 aa13.7□□□□□ -0.22
CACNA1F-201ENST00000323022 DENND3A2RUS2 1198 aa13.7□□□□□ -0.22
CACNA1F-201ENST00000323022 GIGYF1O75420 1035 aaPredicted RBP13.7□□□□□ -0.22
CACNA1F-201ENST00000323022 ARID4AP29374 1257 aaPredicted RBP13.7□□□□□ -0.22
CACNA1F-201ENST00000323022 CHRNA5P30532 468 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms