RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 FAM13AO94988 1023 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 PODNQ7Z5L7 613 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 GEMIN8Q9NWZ8 242 aaKnown RBP10.73□□□□□ -0.69
COL12A1-201ENST00000322507 TLK1Q9UKI8 766 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 C6orf229H3BNL8 230 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 TMEM87BQ96K49 555 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 IBTKQ9P2D0 1353 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-201ENST00000322507 STX10O60499 249 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 KRT6AP02538 564 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 KRT6BP04259 564 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 KRT6CP48668 564 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 MTMR3Q13615 1198 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 NLRP3Q96P20 1036 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 GPATCH8Q9UKJ3 1502 aaKnown RBP10.73□□□□□ -0.69
COL12A1-201ENST00000322507 SMIM23A6NLE4 172 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 MCF2LO15068 1137 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 C4BPBP20851 252 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 AKAP4Q5JQC9 854 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 GTF3C6Q969F1 213 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 MRPL46Q9H2W6 279 aaKnown RBP10.73□□□□□ -0.69
COL12A1-201ENST00000322507 SPINK5Q9NQ38 1064 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-201ENST00000322507 BAIAP2L1Q9UHR4 511 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 KIF24Q5T7B8 1368 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 MRPS15P82914 257 aaKnown RBP10.72□□□□□ -0.69
COL12A1-201ENST00000322507 OCA2Q04671 838 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 PPP1R7Q15435 360 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 CCDC186Q7Z3E2 898 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 CCDC125Q86Z20 511 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 LINS1Q8NG48 757 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 LZICQ8WZA0 190 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 NOX5Q96PH1 765 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 EMC3Q9P0I2 261 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 S100A9P06702 114 aaKnown RBP10.72□□□□□ -0.69
COL12A1-201ENST00000322507 UBXN1Q04323 297 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 CYP26C1Q6V0L0 522 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 PFDN4Q9NQP4 134 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 EPS15L1Q9UBC2 864 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 BIN1O00499 593 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 ATP8B2P98198 1209 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 SSH2Q76I76 1423 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 MAST3O60307 1309 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 AKR1B15C9JRZ8 316 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-201ENST00000322507 GNA14O95837 355 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 MRPS26Q9BYN8 205 aaKnown RBP10.72□□□□□ -0.69
COL12A1-201ENST00000322507 SERPINB10P48595 397 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 KRR1Q13601 381 aaKnown RBP10.72□□□□□ -0.69
COL12A1-201ENST00000322507 MAIP1Q8WWC4 291 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 LETM2Q2VYF4 491 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 SETDB2Q96T68 719 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 TTLL12Q14166 644 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-201ENST00000322507 SHROOM2Q13796 1616 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 ECE1P42892 770 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 QKIQ96PU8 341 aaKnown RBP eCLIP10.72□□□□□ -0.69
COL12A1-201ENST00000322507 TUBA8Q9NY65 449 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-201ENST00000322507 KIAA0556O60303 1618 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.72□□□□□ -0.69
COL12A1-201ENST00000322507 CCDC80Q76M96 950 aa10.72□□□□□ -0.69
COL12A1-201ENST00000322507 NBPF9Q3BBW0 867 aa10.71□□□□□ -0.69
COL12A1-201ENST00000322507 CDCA7Q9BWT1 371 aaPredicted RBP10.71□□□□□ -0.69
COL12A1-201ENST00000322507 CALUO43852 315 aaPredicted RBP10.71□□□□□ -0.69
COL12A1-201ENST00000322507 SMARCA5O60264 1052 aaPredicted RBP10.71□□□□□ -0.69
COL12A1-201ENST00000322507 MYL5Q02045 173 aa10.71□□□□□ -0.69
COL12A1-201ENST00000322507 WDR44Q5JSH3 913 aa10.71□□□□□ -0.69
COL12A1-201ENST00000322507 TMCO4Q5TGY1 634 aa10.71□□□□□ -0.69
COL12A1-201ENST00000322507 EYA3Q99504 573 aa10.71□□□□□ -0.69
COL12A1-201ENST00000322507 USP48Q86UV5 1035 aa10.71□□□□□ -0.69
COL12A1-201ENST00000322507 A2MP01023 1474 aa10.71□□□□□ -0.69
COL12A1-201ENST00000322507 MAP3K5Q99683 1374 aa10.71□□□□□ -0.69
COL12A1-201ENST00000322507 TNNI2P48788 182 aa10.71□□□□□ -0.69
COL12A1-201ENST00000322507 LIN9Q5TKA1 542 aa10.71□□□□□ -0.69
COL12A1-201ENST00000322507 MCF2L2Q86YR7 1114 aa10.71□□□□□ -0.69
COL12A1-201ENST00000322507 BRDTQ58F21 947 aaPredicted RBP10.71□□□□□ -0.7
COL12A1-201ENST00000322507 CTAGE3PQ8IX95 158 aa10.71□□□□□ -0.7
COL12A1-201ENST00000322507 SYCP2Q9BX26 1530 aa10.71□□□□□ -0.7
COL12A1-201ENST00000322507 BRF1Q92994 677 aa10.71□□□□□ -0.7
COL12A1-201ENST00000322507 RBM8AQ9Y5S9 174 aaKnown RBP10.71□□□□□ -0.7
COL12A1-201ENST00000322507 TNRQ92752 1358 aa10.71□□□□□ -0.7
COL12A1-201ENST00000322507 DNA2P51530 1060 aa10.71□□□□□ -0.7
COL12A1-201ENST00000322507 UBE2Q1Q7Z7E8 422 aa10.71□□□□□ -0.7
COL12A1-201ENST00000322507 RGS22Q8NE09 1264 aa10.71□□□□□ -0.7
COL12A1-201ENST00000322507 ARHGAP10A1A4S6 786 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 MX2P20592 715 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 VSIG1Q86XK7 387 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 Q6ZUG5 572 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 GIPC1O14908 333 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 RAB14P61106 215 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 GUCY1B3Q02153 619 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 DCTPP1Q9H773 170 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 FAM169AQ9Y6X4 670 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 MAGEB6P1A0A0J9YX57 407 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 SUFUQ9UMX1 484 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 AMOTL2Q9Y2J4 779 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 RNASELQ05823 741 aaKnown RBP10.7□□□□□ -0.7
COL12A1-201ENST00000322507 PHKBQ93100 1093 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 ANGPTL2Q9UKU9 493 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 KDM5DQ9BY66 1539 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 GOLGA6BA6NDN3 693 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 TSPAN9O75954 239 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 APOA1P02647 267 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 KRT3P12035 628 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms