RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 CCDC181Q5TID7 509 aa12.45□□□□□ -0.42
TOP3A-201ENST00000321105 C2CD5Q86YS7 1000 aa12.45□□□□□ -0.42
TOP3A-201ENST00000321105 MB21D2Q8IYB1 491 aaPredicted RBP12.45□□□□□ -0.42
TOP3A-201ENST00000321105 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.45□□□□□ -0.42
TOP3A-201ENST00000321105 GOLPH3LQ9H4A5 285 aa12.45□□□□□ -0.42
TOP3A-201ENST00000321105 RAD17O75943 681 aa12.45□□□□□ -0.42
TOP3A-201ENST00000321105 SCG2P13521 617 aa12.45□□□□□ -0.42
TOP3A-201ENST00000321105 SNAP25P60880 206 aa12.45□□□□□ -0.42
TOP3A-201ENST00000321105 ATL3Q6DD88 541 aa12.45□□□□□ -0.42
TOP3A-201ENST00000321105 KCTD1Q719H9 257 aa12.45□□□□□ -0.42
TOP3A-201ENST00000321105 PPP1R9BQ96SB3 815 aa12.45□□□□□ -0.42
TOP3A-201ENST00000321105 XDHP47989 1333 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 SPATA31A1Q5TZJ5 1347 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 KIF28PB7ZC32 967 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 DDX39AO00148 427 aaKnown RBP12.44□□□□□ -0.42
TOP3A-201ENST00000321105 CSF1RP07333 972 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 SLC39A14Q15043 492 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 C3orf67Q6ZVT6 689 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 ZNF34Q8IZ26 560 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 MXD3Q9BW11 206 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 CENPHQ9H3R5 247 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 ARPP21Q9UBL0 812 aaPredicted RBP12.44□□□□□ -0.42
TOP3A-201ENST00000321105 FAM205CA6NFA0 338 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 POLR3GO15318 223 aaPredicted RBP12.44□□□□□ -0.42
TOP3A-201ENST00000321105 AKR1B10O60218 316 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 GDF11O95390 407 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 CFBP00751 764 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 AMPD3Q01432 767 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 PDE4DQ08499 809 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 HSP90B2PQ58FF3 399 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 JDP2Q8WYK2 163 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 COA7Q96BR5 231 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 DESI2Q9BSY9 194 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 RTEL1Q9NZ71 1219 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 RPAP1Q9BWH6 1393 aaPredicted RBP12.44□□□□□ -0.42
TOP3A-201ENST00000321105 BMP15O95972 392 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 CMA1P23946 247 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 SPA17Q15506 151 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 TXNRD3Q86VQ6 643 aa12.44□□□□□ -0.42
TOP3A-201ENST00000321105 SYMPKQ92797 1274 aaKnown RBP12.44□□□□□ -0.42
TOP3A-201ENST00000321105 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.44□□□□□ -0.426e-9■■■■■ 134.6
TOP3A-201ENST00000321105 ERICH4A6NGS2 130 aa12.43□□□□□ -0.42
TOP3A-201ENST00000321105 NEURL4Q96JN8 1562 aa12.43□□□□□ -0.42
TOP3A-201ENST00000321105 RIOK3O14730 519 aaKnown RBP12.43□□□□□ -0.42
TOP3A-201ENST00000321105 NLRP12P59046 1061 aa12.43□□□□□ -0.42
TOP3A-201ENST00000321105 INTS5Q6P9B9 1019 aaKnown RBP12.43□□□□□ -0.42
TOP3A-201ENST00000321105 CLEC4GQ6UXB4 293 aa12.43□□□□□ -0.42
TOP3A-201ENST00000321105 ENAHQ8N8S7 591 aaPredicted RBP12.43□□□□□ -0.42
TOP3A-201ENST00000321105 TEKT1Q969V4 418 aa12.43□□□□□ -0.42
TOP3A-201ENST00000321105 GUCA1BQ9UMX6 200 aa12.43□□□□□ -0.42
TOP3A-201ENST00000321105 ITSN1Q15811 1721 aa12.43□□□□□ -0.42
TOP3A-201ENST00000321105 SHPRHQ149N8 1683 aa12.43□□□□□ -0.42
TOP3A-201ENST00000321105 UTYO14607 1347 aa12.43□□□□□ -0.42
TOP3A-201ENST00000321105 ANTXR2P58335 489 aa12.43□□□□□ -0.42
TOP3A-201ENST00000321105 UBXN2AP68543 259 aa12.43□□□□□ -0.42
TOP3A-201ENST00000321105 CCDC174Q6PII3 467 aa12.43□□□□□ -0.42
TOP3A-201ENST00000321105 NELFCDQ8IXH7 590 aa12.43□□□□□ -0.42
TOP3A-201ENST00000321105 BLIDQ8IZY5 108 aa12.43□□□□□ -0.42
TOP3A-201ENST00000321105 IGSF22Q8N9C0 903 aa12.43□□□□□ -0.42
TOP3A-201ENST00000321105 ZNF397Q8NF99 534 aaPredicted RBP12.43□□□□□ -0.42
TOP3A-201ENST00000321105 POLD4Q9HCU8 107 aa12.43□□□□□ -0.42
TOP3A-201ENST00000321105 PUF60Q9UHX1 559 aaKnown RBP12.43□□□□□ -0.42
TOP3A-201ENST00000321105 FOXN1O15353 648 aa12.42□□□□□ -0.42
TOP3A-201ENST00000321105 HSPA1LP34931 641 aa12.42□□□□□ -0.42
TOP3A-201ENST00000321105 GPS2Q13227 327 aa12.42□□□□□ -0.42
TOP3A-201ENST00000321105 REXO1Q8N1G1 1221 aaKnown RBP12.42□□□□□ -0.42
TOP3A-201ENST00000321105 CCDC150Q8NCX0 1101 aa12.42□□□□□ -0.42
TOP3A-201ENST00000321105 GJD4Q96KN9 370 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-201ENST00000321105 TSG101Q99816 390 aa12.42□□□□□ -0.42
TOP3A-201ENST00000321105 EPB41L4AQ9HCS5 686 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-201ENST00000321105 STK32BQ9NY57 414 aa12.42□□□□□ -0.42
TOP3A-201ENST00000321105 ADGRB2O60241 1585 aa12.42□□□□□ -0.42
TOP3A-201ENST00000321105 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-201ENST00000321105 USP42Q9H9J4 1324 aaKnown RBP12.42□□□□□ -0.42
TOP3A-201ENST00000321105 SORBS3O60504 671 aa12.42□□□□□ -0.42
TOP3A-201ENST00000321105 NEMFO60524 1076 aa12.42□□□□□ -0.42
TOP3A-201ENST00000321105 IFNAR1P17181 557 aa12.42□□□□□ -0.42
TOP3A-201ENST00000321105 CACTINQ8WUQ7 758 aaKnown RBP12.42□□□□□ -0.42
TOP3A-201ENST00000321105 LY9Q9HBG7 655 aa12.42□□□□□ -0.42
TOP3A-201ENST00000321105 DCP1AQ9NPI6 582 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-201ENST00000321105 ATP8A2Q9NTI2 1148 aa12.42□□□□□ -0.42
TOP3A-201ENST00000321105 CTDNEP1O95476 244 aa12.42□□□□□ -0.42
TOP3A-201ENST00000321105 MYCNP04198 464 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-201ENST00000321105 EXOSC10Q01780 885 aaKnown RBP12.42□□□□□ -0.42
TOP3A-201ENST00000321105 NONOQ15233 471 aaKnown RBP eCLIP12.42□□□□□ -0.42
TOP3A-201ENST00000321105 KRBA2Q6ZNG9 492 aa12.42□□□□□ -0.42
TOP3A-201ENST00000321105 SYCP3Q8IZU3 236 aa12.42□□□□□ -0.42
TOP3A-201ENST00000321105 JADE2Q9NQC1 790 aa12.42□□□□□ -0.42
TOP3A-201ENST00000321105 LRWD1Q9UFC0 647 aa12.42□□□□□ -0.42
TOP3A-201ENST00000321105 CASP7P55210 303 aa12.42□□□□□ -0.42
TOP3A-201ENST00000321105 SYCP1Q15431 976 aa12.42□□□□□ -0.42
TOP3A-201ENST00000321105 TAF3Q5VWG9 929 aa12.42□□□□□ -0.42
TOP3A-201ENST00000321105 SNX29Q8TEQ0 813 aa12.42□□□□□ -0.42
TOP3A-201ENST00000321105 HDAC9Q9UKV0 1011 aa12.42□□□□□ -0.42
TOP3A-201ENST00000321105 THRAP3Q9Y2W1 955 aaKnown RBP12.42□□□□□ -0.42
TOP3A-201ENST00000321105 CDHR2Q9BYE9 1310 aa12.41□□□□□ -0.42
TOP3A-201ENST00000321105 ATP2B4P23634 1241 aa12.41□□□□□ -0.42
TOP3A-201ENST00000321105 GRAPQ13588 217 aa12.41□□□□□ -0.42
TOP3A-201ENST00000321105 NKX1-1Q15270 411 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-201ENST00000321105 HS1BP3Q53T59 392 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms