RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 TFRCP02786 760 aaKnown RBP15.27■□□□□ 0.04
SKA3-202ENST00000314759 UQCRFS1P1P0C7P4 283 aa15.27■□□□□ 0.04
SKA3-202ENST00000314759 WTAPQ15007 396 aa15.27■□□□□ 0.04
SKA3-202ENST00000314759 RASGRP2Q7LDG7 609 aa15.27■□□□□ 0.04
SKA3-202ENST00000314759 TOMM22Q9NS69 142 aa15.27■□□□□ 0.04
SKA3-202ENST00000314759 ACTN2P35609 894 aa15.27■□□□□ 0.03
SKA3-202ENST00000314759 NOP2P46087 812 aaKnown RBP15.27■□□□□ 0.03
SKA3-202ENST00000314759 ZNF569Q5MCW4 686 aa15.27■□□□□ 0.03
SKA3-202ENST00000314759 BEND6Q5SZJ8 279 aaPredicted RBP15.27■□□□□ 0.03
SKA3-202ENST00000314759 CDKAL1Q5VV42 579 aa15.27■□□□□ 0.03
SKA3-202ENST00000314759 GIGYF2Q6Y7W6 1299 aaKnown RBP15.27■□□□□ 0.03
SKA3-202ENST00000314759 DNAJC10Q8IXB1 793 aa15.27■□□□□ 0.03
SKA3-202ENST00000314759 HELBQ8NG08 1087 aaPredicted RBP15.27■□□□□ 0.03
SKA3-202ENST00000314759 HNRNPLLQ8WVV9 542 aaKnown RBP15.27■□□□□ 0.03
SKA3-202ENST00000314759 SHISA4Q96DD7 197 aa15.27■□□□□ 0.03
SKA3-202ENST00000314759 PNKPQ96T60 521 aa15.27■□□□□ 0.03
SKA3-202ENST00000314759 PSD3Q9NYI0 1048 aa15.27■□□□□ 0.03
SKA3-202ENST00000314759 TNS3Q68CZ2 1445 aa15.27■□□□□ 0.03
SKA3-202ENST00000314759 PAPPAQ13219 1627 aa15.27■□□□□ 0.03
SKA3-202ENST00000314759 FAM205CA6NFA0 338 aa15.27■□□□□ 0.03
SKA3-202ENST00000314759 MFAP3LO75121 409 aa15.27■□□□□ 0.03
SKA3-202ENST00000314759 CASP14P31944 242 aa15.27■□□□□ 0.03
SKA3-202ENST00000314759 SMYD4Q8IYR2 804 aaPredicted RBP15.27■□□□□ 0.03
SKA3-202ENST00000314759 SPATA5Q8NB90 893 aa15.27■□□□□ 0.03
SKA3-202ENST00000314759 WDR17Q8IZU2 1322 aa15.26■□□□□ 0.03
SKA3-202ENST00000314759 SYNRGQ9UMZ2 1314 aa15.26■□□□□ 0.03
SKA3-202ENST00000314759 SH3RF1Q7Z6J0 888 aa15.26■□□□□ 0.03
SKA3-202ENST00000314759 CEP112Q8N8E3 955 aa15.26■□□□□ 0.03
SKA3-202ENST00000314759 FANCBQ8NB91 859 aa15.26■□□□□ 0.03
SKA3-202ENST00000314759 NUP133Q8WUM0 1156 aa15.26■□□□□ 0.03
SKA3-202ENST00000314759 PAGE5Q96GU1 130 aa15.26■□□□□ 0.03
SKA3-202ENST00000314759 AATFQ9NY61 560 aaKnown RBP eCLIP15.26■□□□□ 0.03
SKA3-202ENST00000314759 CWC15Q9P013 229 aaKnown RBP15.26■□□□□ 0.03
SKA3-202ENST00000314759 RAB21Q9UL25 225 aa15.26■□□□□ 0.03
SKA3-202ENST00000314759 IRS4O14654 1257 aaPredicted RBP15.26■□□□□ 0.03
SKA3-202ENST00000314759 FXR1P51114 621 aaKnown RBP eCLIP15.26■□□□□ 0.03
SKA3-202ENST00000314759 CT47A1Q5JQC4 288 aaPredicted RBP15.26■□□□□ 0.03
SKA3-202ENST00000314759 STAG1Q8WVM7 1258 aa15.26■□□□□ 0.03
SKA3-202ENST00000314759 SPATA31A3Q5VYP0 1347 aa15.26■□□□□ 0.03
SKA3-202ENST00000314759 CCDC196A0A1B0GTZ2 297 aa15.25■□□□□ 0.03
SKA3-202ENST00000314759 ABL1P00519 1130 aa15.25■□□□□ 0.03
SKA3-202ENST00000314759 GYPCP04921 128 aa15.25■□□□□ 0.03
SKA3-202ENST00000314759 USP5P45974 858 aa15.25■□□□□ 0.03
SKA3-202ENST00000314759 SART3Q15020 963 aaKnown RBP15.25■□□□□ 0.03
SKA3-202ENST00000314759 EARS2Q5JPH6 523 aaKnown RBP15.25■□□□□ 0.03
SKA3-202ENST00000314759 PPP1R3GB7ZBB8 358 aa15.25■□□□□ 0.03
SKA3-202ENST00000314759 FGFR2P21802 821 aa15.25■□□□□ 0.03
SKA3-202ENST00000314759 MAP3K12Q12852 859 aa15.25■□□□□ 0.03
SKA3-202ENST00000314759 RASGRF1Q13972 1273 aa15.25■□□□□ 0.03
SKA3-202ENST00000314759 PUM3Q15397 648 aaKnown RBP15.25■□□□□ 0.03
SKA3-202ENST00000314759 KIF4BQ2VIQ3 1234 aa15.25■□□□□ 0.03
SKA3-202ENST00000314759 MSANTD4Q8NCY6 345 aa15.25■□□□□ 0.03
SKA3-202ENST00000314759 LPIN2Q92539 896 aa15.25■□□□□ 0.03
SKA3-202ENST00000314759 TRIM75PA6NK02 468 aa15.24■□□□□ 0.03
SKA3-202ENST00000314759 SNAP23O00161 211 aa15.24■□□□□ 0.03
SKA3-202ENST00000314759 TDO2P48775 406 aa15.24■□□□□ 0.03
SKA3-202ENST00000314759 DPYDQ12882 1025 aa15.24■□□□□ 0.03
SKA3-202ENST00000314759 ZNF654Q8IZM8 581 aa15.24■□□□□ 0.03
SKA3-202ENST00000314759 LCORLQ8N3X6 602 aa15.24■□□□□ 0.03
SKA3-202ENST00000314759 ACRBPQ8NEB7 543 aa15.24■□□□□ 0.03
SKA3-202ENST00000314759 SYMPKQ92797 1274 aaKnown RBP15.24■□□□□ 0.03
SKA3-202ENST00000314759 CTAGE1Q96RT6 745 aa15.24■□□□□ 0.03
SKA3-202ENST00000314759 CDC5LQ99459 802 aaKnown RBP15.24■□□□□ 0.03
SKA3-202ENST00000314759 ASAP1Q9ULH1 1129 aa15.24■□□□□ 0.03
SKA3-202ENST00000314759 ERICH2A1L162 156 aa15.24■□□□□ 0.03
SKA3-202ENST00000314759 CTAGE9A4FU28 777 aa15.24■□□□□ 0.03
SKA3-202ENST00000314759 SLC35F6Q8N357 371 aa15.24■□□□□ 0.03
SKA3-202ENST00000314759 L1RE1Q9UN81 338 aa15.24■□□□□ 0.03
SKA3-202ENST00000314759 FAN1Q9Y2M0 1017 aa15.24■□□□□ 0.03
SKA3-202ENST00000314759 COBLO75128 1261 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 IL2RBP14784 551 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 FECHP22830 423 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 FILIP1LQ4L180 1135 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 HDXQ7Z353 690 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 CNGA4Q8IV77 575 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 TMTC2Q8N394 836 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 IQUBQ8NA54 791 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 GSDMAQ96QA5 445 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 EFCC1Q9HA90 598 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 ABCB6Q9NP58 842 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 VPS54Q9P1Q0 977 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 SLC4A4Q9Y6R1 1079 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 ANKRD65E5RJM6 399 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 WNT7AO00755 349 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 TMOD3Q9NYL9 352 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 TRMT112Q9UI30 125 aaKnown RBP15.23■□□□□ 0.03
SKA3-202ENST00000314759 CHD4Q14839 1912 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 POTEB2H3BUK9 544 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 RNF225M0QZC1 329 aaPredicted RBP15.23■□□□□ 0.03
SKA3-202ENST00000314759 SEMA3EO15041 775 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 ERVK-24P63145 666 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 TUBB2AQ13885 445 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 TUBB2BQ9BVA1 445 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 PRDM11Q9NQV5 511 aa15.23■□□□□ 0.03
SKA3-202ENST00000314759 TTF2Q9UNY4 1162 aaKnown RBP15.23■□□□□ 0.03
SKA3-202ENST00000314759 PHACTR2O75167 634 aa15.22■□□□□ 0.03
SKA3-202ENST00000314759 RHOXF2BP0C7M4 288 aa15.22■□□□□ 0.03
SKA3-202ENST00000314759 CCT6AP40227 531 aaKnown RBP15.22■□□□□ 0.03
SKA3-202ENST00000314759 PKN1Q16512 942 aa15.22■□□□□ 0.03
SKA3-202ENST00000314759 CCDC51Q96ER9 411 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms