RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 RMND1Q9NWS8 449 aa13.71□□□□□ -0.22
EBF1-201ENST00000313708 BIN2Q9UBW5 565 aaPredicted RBP13.71□□□□□ -0.22
EBF1-201ENST00000313708 HMGB1P1B2RPK0 211 aaPredicted RBP13.7□□□□□ -0.22
EBF1-201ENST00000313708 CTNND1O60716 968 aaKnown RBP13.7□□□□□ -0.22
EBF1-201ENST00000313708 ARMC9Q7Z3E5 817 aa13.7□□□□□ -0.22
EBF1-201ENST00000313708 ARHGEF2Q92974 986 aaKnown RBP13.7□□□□□ -0.22
EBF1-201ENST00000313708 HOOK2Q96ED9 719 aa13.7□□□□□ -0.22
EBF1-201ENST00000313708 SCOCQ9UIL1 159 aa13.7□□□□□ -0.22
EBF1-201ENST00000313708 hCG_2014768A0A024R1R8 64 aa13.7□□□□□ -0.22
EBF1-201ENST00000313708 TTC36A6NLP5 189 aa13.7□□□□□ -0.22
EBF1-201ENST00000313708 HEXIM1O94992 359 aaKnown RBP13.7□□□□□ -0.22
EBF1-201ENST00000313708 DESP17661 470 aa13.7□□□□□ -0.22
EBF1-201ENST00000313708 PLCD1P51178 756 aa13.7□□□□□ -0.22
EBF1-201ENST00000313708 MMS19Q96T76 1030 aa13.7□□□□□ -0.22
EBF1-201ENST00000313708 IL25Q9H293 177 aa13.7□□□□□ -0.22
EBF1-201ENST00000313708 NFU1Q9UMS0 254 aa13.7□□□□□ -0.22
EBF1-201ENST00000313708 CD109Q6YHK3 1445 aa13.7□□□□□ -0.22
EBF1-201ENST00000313708 MFAP3LO75121 409 aa13.7□□□□□ -0.22
EBF1-201ENST00000313708 HOOK3Q86VS8 718 aa13.7□□□□□ -0.22
EBF1-201ENST00000313708 NUP153P49790 1475 aaKnown RBP13.7□□□□□ -0.22
EBF1-201ENST00000313708 ERVK-7P63135 1459 aa13.7□□□□□ -0.22
EBF1-201ENST00000313708 IFIT1P09914 478 aaKnown RBP13.7□□□□□ -0.22
EBF1-201ENST00000313708 MAP7Q14244 749 aa13.7□□□□□ -0.22
EBF1-201ENST00000313708 CUL5Q93034 780 aa13.7□□□□□ -0.22
EBF1-201ENST00000313708 IFIH1Q9BYX4 1025 aaKnown RBP13.7□□□□□ -0.22
EBF1-201ENST00000313708 KCND1Q9NSA2 647 aa13.7□□□□□ -0.22
EBF1-201ENST00000313708 CD2APQ9Y5K6 639 aa13.7□□□□□ -0.22
EBF1-201ENST00000313708 C6orf163Q5TEZ5 329 aa13.7□□□□□ -0.22
EBF1-201ENST00000313708 TRPC6Q9Y210 931 aa13.7□□□□□ -0.22
EBF1-201ENST00000313708 MAP3K2Q9Y2U5 619 aa13.7□□□□□ -0.22
EBF1-201ENST00000313708 IFNAR2P48551 515 aa13.69□□□□□ -0.22
EBF1-201ENST00000313708 ARID5AQ03989 594 aa13.69□□□□□ -0.22
EBF1-201ENST00000313708 DYNC1I2Q13409 638 aaKnown RBP13.69□□□□□ -0.22
EBF1-201ENST00000313708 NECTIN1Q15223 517 aa13.69□□□□□ -0.22
EBF1-201ENST00000313708 DIXDC1Q155Q3 683 aa13.69□□□□□ -0.22
EBF1-201ENST00000313708 PHAXQ9H814 394 aaKnown RBP13.69□□□□□ -0.22
EBF1-201ENST00000313708 CDC25CP30307 473 aa13.69□□□□□ -0.22
EBF1-201ENST00000313708 SLC8A3P57103 927 aa13.69□□□□□ -0.22
EBF1-201ENST00000313708 MTMR3Q13615 1198 aa13.69□□□□□ -0.22
EBF1-201ENST00000313708 TOB2Q14106 344 aaPredicted RBP13.69□□□□□ -0.22
EBF1-201ENST00000313708 PLCB4Q15147 1175 aa13.69□□□□□ -0.22
EBF1-201ENST00000313708 TTF1Q15361 905 aaPredicted RBP13.69□□□□□ -0.22
EBF1-201ENST00000313708 KIAA0753Q2KHM9 967 aa13.69□□□□□ -0.22
EBF1-201ENST00000313708 CCDC57Q2TAC2 916 aa13.69□□□□□ -0.22
EBF1-201ENST00000313708 USHBP1Q8N6Y0 703 aa13.69□□□□□ -0.22
EBF1-201ENST00000313708 NFATC2IPQ8NCF5 419 aa13.69□□□□□ -0.22
EBF1-201ENST00000313708 NOX5Q96PH1 765 aa13.69□□□□□ -0.22
EBF1-201ENST00000313708 NOVA2Q9UNW9 492 aaKnown RBP13.69□□□□□ -0.22
EBF1-201ENST00000313708 A0A1W2PRG0 241 aa13.69□□□□□ -0.22
EBF1-201ENST00000313708 GNAT1P11488 350 aa13.69□□□□□ -0.22
EBF1-201ENST00000313708 B4GALNT2Q8NHY0 566 aa13.69□□□□□ -0.22
EBF1-201ENST00000313708 STAMQ92783 540 aa13.69□□□□□ -0.22
EBF1-201ENST00000313708 NDUFB9Q9Y6M9 179 aa13.69□□□□□ -0.22
EBF1-201ENST00000313708 TBC1D8BQ0IIM8 1120 aa13.68□□□□□ -0.22
EBF1-201ENST00000313708 SPATA1Q5VX52 437 aa13.68□□□□□ -0.22
EBF1-201ENST00000313708 MAN1B1Q9UKM7 699 aa13.68□□□□□ -0.22
EBF1-201ENST00000313708 GSTTP1A0A1W2PQM5 241 aa13.68□□□□□ -0.22
EBF1-201ENST00000313708 FSBPO95073 299 aa13.68□□□□□ -0.22
EBF1-201ENST00000313708 MYL6BP14649 208 aa13.68□□□□□ -0.22
EBF1-201ENST00000313708 MDH1P40925 334 aaKnown RBP13.68□□□□□ -0.22
EBF1-201ENST00000313708 CTCFP49711 727 aaPredicted RBP13.68□□□□□ -0.22
EBF1-201ENST00000313708 PAPOLAP51003 745 aaKnown RBP13.68□□□□□ -0.22
EBF1-201ENST00000313708 ARMC3Q5W041 872 aa13.68□□□□□ -0.22
EBF1-201ENST00000313708 KRT12Q99456 494 aa13.68□□□□□ -0.22
EBF1-201ENST00000313708 RAB21Q9UL25 225 aa13.68□□□□□ -0.22
EBF1-201ENST00000313708 PLAAQ9Y263 795 aa13.68□□□□□ -0.22
EBF1-201ENST00000313708 TARSL2A2RTX5 802 aaKnown RBP13.68□□□□□ -0.22
EBF1-201ENST00000313708 NDUFA10O95299 355 aa13.68□□□□□ -0.22
EBF1-201ENST00000313708 ATP1A1P05023 1023 aaKnown RBP13.68□□□□□ -0.22
EBF1-201ENST00000313708 TCP1P17987 556 aaKnown RBP13.68□□□□□ -0.22
EBF1-201ENST00000313708 PAK1Q13153 545 aa13.68□□□□□ -0.22
EBF1-201ENST00000313708 SOGA3Q5TF21 947 aa13.68□□□□□ -0.22
EBF1-201ENST00000313708 TC2NQ8N9U0 490 aa13.68□□□□□ -0.22
EBF1-201ENST00000313708 RNPC3Q96LT9 517 aaKnown RBP13.68□□□□□ -0.22
EBF1-201ENST00000313708 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.68□□□□□ -0.22
EBF1-201ENST00000313708 TAOK3Q9H2K8 898 aa13.68□□□□□ -0.22
EBF1-201ENST00000313708 POLR3EQ9NVU0 708 aa13.68□□□□□ -0.22
EBF1-201ENST00000313708 MTMR7Q9Y216 660 aa13.68□□□□□ -0.22
EBF1-201ENST00000313708 CHL1O00533 1208 aa13.68□□□□□ -0.22
EBF1-201ENST00000313708 PSMA7O14818 248 aa13.68□□□□□ -0.22
EBF1-201ENST00000313708 TYW1BQ6NUM6 668 aa13.68□□□□□ -0.22
EBF1-201ENST00000313708 PI4K2BQ8TCG2 481 aa13.68□□□□□ -0.22
EBF1-201ENST00000313708 EDC3Q96F86 508 aaKnown RBP13.68□□□□□ -0.22
EBF1-201ENST00000313708 CWC25Q9NXE8 425 aaPredicted RBP13.68□□□□□ -0.22
EBF1-201ENST00000313708 IFIT3O14879 490 aaKnown RBP13.67□□□□□ -0.22
EBF1-201ENST00000313708 ZBTB43O43298 467 aa13.67□□□□□ -0.22
EBF1-201ENST00000313708 TMEM67Q5HYA8 995 aa13.67□□□□□ -0.22
EBF1-201ENST00000313708 CCNI2Q6ZMN8 369 aaPredicted RBP13.67□□□□□ -0.22
EBF1-201ENST00000313708 CYFIP2Q96F07 1278 aa13.67□□□□□ -0.22
EBF1-201ENST00000313708 PAPOLBQ9NRJ5 636 aaKnown RBP13.67□□□□□ -0.22
EBF1-201ENST00000313708 STXBP3O00186 592 aa13.67□□□□□ -0.22
EBF1-201ENST00000313708 TMED1Q13445 227 aa13.67□□□□□ -0.22
EBF1-201ENST00000313708 GRAMD1CQ8IYS0 662 aa13.67□□□□□ -0.22
EBF1-201ENST00000313708 SSH3Q8TE77 659 aa13.67□□□□□ -0.22
EBF1-201ENST00000313708 FGD4Q96M96 766 aa13.67□□□□□ -0.22
EBF1-201ENST00000313708 TCHPQ9BT92 498 aa13.67□□□□□ -0.22
EBF1-201ENST00000313708 SHANK2Q9UPX8 1470 aa13.67□□□□□ -0.22
EBF1-201ENST00000313708 FOXO3O43524 673 aa13.67□□□□□ -0.22
EBF1-201ENST00000313708 BUB1O43683 1085 aa13.67□□□□□ -0.22
EBF1-201ENST00000313708 ANP32DO95626 131 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms