RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 TAF1CQ15572 869 aaPredicted RBP13.05□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 IMMTQ16891 758 aaKnown RBP13.05□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 ANKRD23Q86SG2 305 aa13.05□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 PROCA1Q8NCQ7 364 aaPredicted RBP13.05□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 RNF41Q9H4P4 317 aaPredicted RBP13.05□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 TSKSQ9UJT2 592 aa13.05□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 ANAPC4Q9UJX5 808 aa13.05□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 CEP350Q5VT06 3117 aa13.04□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 TSPY2A6NKD2 308 aa13.04□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 BTBD19C9JJ37 291 aa13.04□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 HSPA8P11142 646 aaKnown RBP13.04□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 RASA1P20936 1047 aa13.04□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 BACE1P56817 501 aa13.04□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 JAG1P78504 1218 aa13.04□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 ATP2B2Q01814 1243 aa13.04□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 ZYXQ15942 572 aaKnown RBP13.04□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 RRP12Q5JTH9 1297 aaKnown RBP13.04□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 FAM43AQ8N2R8 423 aa13.04□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 ESYT1Q9BSJ8 1104 aa13.04□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 IL25Q9H293 177 aa13.04□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 ZFYVE28Q9HCC9 887 aa13.04□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 PNMA3Q9UL41 463 aa13.04□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 AGTPBP1Q9UPW5 1226 aa13.04□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 PLIN4Q96Q06 1357 aa13.04□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 PDHXO00330 501 aa13.03□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 TBC1D8O95759 1140 aa13.03□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 PCP11498 1178 aaKnown RBP13.03□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 SH3D19Q5HYK7 790 aa13.03□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 PPP4R3BQ5MIZ7 849 aa13.03□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 USP17L2Q6R6M4 530 aa13.03□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 MFSD6Q6ZSS7 791 aa13.03□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 PARK7Q99497 189 aaKnown RBP13.03□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 PTPN18Q99952 460 aa13.03□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 KANSL2Q9H9L4 492 aa13.03□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 PARP14Q460N5 1801 aa13.03□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 MGAMO43451 1857 aa13.03□□□□□ -0.32
CSPG4P1Y-201ENST00000306641 RANBP6O60518 1105 aaKnown RBP13.02□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 GUCY1A2P33402 732 aa13.02□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 LBX1P52954 281 aa13.02□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 CRHR2Q13324 411 aa13.02□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 AKNAD1Q5T1N1 836 aa13.02□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 STAG1Q8WVM7 1258 aa13.02□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 CFHR5Q9BXR6 569 aa13.02□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 KIAA1683Q9H0B3 1180 aa13.02□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 ANO2Q9NQ90 1003 aa13.02□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.02□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 SLC45A1Q9Y2W3 748 aa13.02□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 ORC4O43929 436 aa13.01□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 OSBPP22059 807 aa13.01□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 NT5C2P49902 561 aa13.01□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 IRX3P78415 501 aaPredicted RBP13.01□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 TFAP4Q01664 338 aa13.01□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 FAM47AQ5JRC9 791 aa13.01□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 CLEC10AQ8IUN9 316 aa13.01□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 ACER1Q8TDN7 264 aa13.01□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 SMCR8Q8TEV9 937 aaPredicted RBP13.01□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 CNNM2Q9H8M5 875 aa13.01□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 GOPCQ9HD26 462 aa13.01□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 RAD21O60216 631 aa13□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 EEF2P13639 858 aaKnown RBP13□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 PTH1RQ03431 593 aa13□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 TRDNQ13061 729 aa13□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 DGKZQ13574 1117 aa13□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 MOGSQ13724 837 aa13□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 TREML2Q5T2D2 321 aa13□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 GPAT2Q6NUI2 795 aa13□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 TBC1D10CQ8IV04 446 aa13□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 NEDD1Q8NHV4 660 aa13□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 ESR2Q92731 530 aa13□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 CEP95Q96GE4 821 aa13□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 C12orf42Q96LP6 360 aa13□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 RBM8AQ9Y5S9 174 aaKnown RBP13□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 COL11A1P12107 1806 aaPredicted RBP12.99□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 NEDD4P46934 1319 aa12.99□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 GPR25O00155 361 aa12.99□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 TLR2O60603 784 aa12.99□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 TTLL1O95922 423 aa12.99□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 VCAM1P19320 739 aa12.99□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 NOM1Q5C9Z4 860 aaKnown RBP12.99□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 LPAR1Q92633 364 aa12.99□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 KRT23Q9C075 422 aa12.99□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 VCPKMTQ9H867 229 aa12.99□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 PRDM10Q9NQV6 1147 aa12.99□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 EMILIN3Q9NT22 766 aa12.99□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 NYAP2Q9P242 653 aa12.99□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 TMX2Q9Y320 296 aa12.99□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 IGKV6D-41A0A0C4DH26 115 aa12.98□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 A0A1W2PRG0 241 aa12.98□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 FKTNO75072 461 aa12.98□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 FGRP09769 529 aa12.98□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 CYP2C8P10632 490 aa12.98□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 RNF20Q5VTR2 975 aa12.98□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 RALYLQ86SE5 291 aaKnown RBP12.98□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 IQCA1Q86XH1 822 aa12.98□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 GTF3C2Q8WUA4 911 aaPredicted RBP12.98□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 MAP4K1Q92918 833 aa12.98□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.98□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 TANGO6Q9C0B7 1094 aa12.98□□□□□ -0.33
CSPG4P1Y-201ENST00000306641 LSG1Q9H089 658 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms