RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 SWAP70Q9UH65 585 aa18.79■□□□□ 0.6
FANCA-201ENST00000305699 SLC4A4Q9Y6R1 1079 aa18.79■□□□□ 0.6
FANCA-201ENST00000305699 MYH8P13535 1937 aa18.79■□□□□ 0.6
FANCA-201ENST00000305699 PEX10O60683 326 aa18.78■□□□□ 0.6
FANCA-201ENST00000305699 CCAR1Q8IX12 1150 aaKnown RBP18.78■□□□□ 0.6
FANCA-201ENST00000305699 NKX2-3Q8TAU0 364 aa18.78■□□□□ 0.6
FANCA-201ENST00000305699 PXYLP1Q8TE99 480 aa18.78■□□□□ 0.6
FANCA-201ENST00000305699 C12orf42Q96LP6 360 aa18.78■□□□□ 0.6
FANCA-201ENST00000305699 KIAA1683Q9H0B3 1180 aa18.78■□□□□ 0.6
FANCA-201ENST00000305699 PUS7LQ9H0K6 701 aaKnown RBP18.78■□□□□ 0.6
FANCA-201ENST00000305699 TXNRD2Q9NNW7 524 aa18.78■□□□□ 0.6
FANCA-201ENST00000305699 CYP2D7A0A087X1C5 515 aa18.77■□□□□ 0.6
FANCA-201ENST00000305699 USP17L15C9J2P7 530 aa18.77■□□□□ 0.6
FANCA-201ENST00000305699 USP17L13C9JLJ4 530 aa18.77■□□□□ 0.6
FANCA-201ENST00000305699 USP17L11C9JVI0 530 aa18.77■□□□□ 0.6
FANCA-201ENST00000305699 USP17L18D6R9N7 530 aa18.77■□□□□ 0.6
FANCA-201ENST00000305699 USP17L22D6RA61 530 aa18.77■□□□□ 0.6
FANCA-201ENST00000305699 USP17L17D6RBQ6 530 aa18.77■□□□□ 0.6
FANCA-201ENST00000305699 USP17L19D6RCP7 530 aa18.77■□□□□ 0.6
FANCA-201ENST00000305699 USP17L20D6RJB6 530 aa18.77■□□□□ 0.6
FANCA-201ENST00000305699 INHAP05111 366 aa18.77■□□□□ 0.6
FANCA-201ENST00000305699 GUCY1A2P33402 732 aa18.77■□□□□ 0.6
FANCA-201ENST00000305699 USP17L24Q0WX57 530 aa18.77■□□□□ 0.6
FANCA-201ENST00000305699 KBTBD3Q8NAB2 608 aa18.77■□□□□ 0.6
FANCA-201ENST00000305699 GTF3C2Q8WUA4 911 aaPredicted RBP18.77■□□□□ 0.6
FANCA-201ENST00000305699 CRBNQ96SW2 442 aa18.77■□□□□ 0.6
FANCA-201ENST00000305699 UNC93B1Q9H1C4 597 aa18.77■□□□□ 0.6
FANCA-201ENST00000305699 USP17L12C9JPN9 530 aa18.76■□□□□ 0.59
FANCA-201ENST00000305699 USP17L21D6R901 530 aa18.76■□□□□ 0.59
FANCA-201ENST00000305699 GJB1P08034 283 aa18.76■□□□□ 0.59
FANCA-201ENST00000305699 VCAM1P19320 739 aa18.76■□□□□ 0.59
FANCA-201ENST00000305699 ERVK-9P63128 1117 aa18.76■□□□□ 0.59
FANCA-201ENST00000305699 ERVK-24P63145 666 aa18.76■□□□□ 0.59
FANCA-201ENST00000305699 TMEM179Q6ZVK1 233 aa18.76■□□□□ 0.59
FANCA-201ENST00000305699 CWC22Q9HCG8 908 aaKnown RBP18.76■□□□□ 0.59
FANCA-201ENST00000305699 RBPJLQ9UBG7 517 aa18.76■□□□□ 0.59
FANCA-201ENST00000305699 ZBTB47Q9UFB7 747 aaPredicted RBP18.76■□□□□ 0.59
FANCA-201ENST00000305699 C12orf60Q5U649 245 aa18.75■□□□□ 0.59
FANCA-201ENST00000305699 SHISA4Q96DD7 197 aa18.75■□□□□ 0.59
FANCA-201ENST00000305699 ERC2O15083 957 aa18.74■□□□□ 0.59
FANCA-201ENST00000305699 RNF113AO15541 343 aaKnown RBP18.74■□□□□ 0.59
FANCA-201ENST00000305699 GJA8P48165 433 aa18.74■□□□□ 0.59
FANCA-201ENST00000305699 CATSPERGQ6ZRH7 1159 aa18.74■□□□□ 0.59
FANCA-201ENST00000305699 RPAP3Q9H6T3 665 aaPredicted RBP18.74■□□□□ 0.59
FANCA-201ENST00000305699 TTC41PQ6P2S7 1318 aa18.74■□□□□ 0.59
FANCA-201ENST00000305699 SMIM22K7EJ46 135 aa18.74■□□□□ 0.59
FANCA-201ENST00000305699 ZFYP08048 801 aaPredicted RBP18.74■□□□□ 0.59
FANCA-201ENST00000305699 AKR1B1P15121 316 aa18.74■□□□□ 0.59
FANCA-201ENST00000305699 MAPK4P31152 587 aa18.74■□□□□ 0.59
FANCA-201ENST00000305699 CDK8P49336 464 aa18.74■□□□□ 0.59
FANCA-201ENST00000305699 LRRFIP1Q32MZ4 808 aaKnown RBP18.74■□□□□ 0.59
FANCA-201ENST00000305699 Q3C1V9 767 aa18.74■□□□□ 0.59
FANCA-201ENST00000305699 U2AF1L4Q8WU68 220 aaKnown RBP18.74■□□□□ 0.59
FANCA-201ENST00000305699 APPBP2Q92624 585 aa18.74■□□□□ 0.59
FANCA-201ENST00000305699 STRBPQ96SI9 672 aaKnown RBP18.74■□□□□ 0.59
FANCA-201ENST00000305699 NUDT12Q9BQG2 462 aa18.74■□□□□ 0.59
FANCA-201ENST00000305699 GJD2Q9UKL4 321 aa18.74■□□□□ 0.59
FANCA-201ENST00000305699 A0A1W2PRG0 241 aa18.73■□□□□ 0.59
FANCA-201ENST00000305699 HMGCRP04035 888 aa18.73■□□□□ 0.59
FANCA-201ENST00000305699 CYP2B6P20813 491 aa18.73■□□□□ 0.59
FANCA-201ENST00000305699 ICA1Q05084 483 aa18.73■□□□□ 0.59
FANCA-201ENST00000305699 CTR9Q6PD62 1173 aa18.73■□□□□ 0.59
FANCA-201ENST00000305699 C16orf86Q6ZW13 317 aa18.73■□□□□ 0.59
FANCA-201ENST00000305699 CLEC10AQ8IUN9 316 aa18.73■□□□□ 0.59
FANCA-201ENST00000305699 OTUD7AQ8TE49 926 aaPredicted RBP18.73■□□□□ 0.59
FANCA-201ENST00000305699 OSBP2Q969R2 916 aa18.73■□□□□ 0.59
FANCA-201ENST00000305699 CCDC17Q96LX7 622 aa18.73■□□□□ 0.59
FANCA-201ENST00000305699 DEFB118Q96PH6 123 aa18.73■□□□□ 0.59
FANCA-201ENST00000305699 TANGO6Q9C0B7 1094 aa18.73■□□□□ 0.59
FANCA-201ENST00000305699 PORCNQ9H237 461 aa18.73■□□□□ 0.59
FANCA-201ENST00000305699 ARHGEF10LQ9HCE6 1279 aa18.73■□□□□ 0.59
FANCA-201ENST00000305699 ARPP21Q9UBL0 812 aaPredicted RBP18.73■□□□□ 0.59
FANCA-201ENST00000305699 RABGAP1Q9Y3P9 1069 aa18.73■□□□□ 0.59
FANCA-201ENST00000305699 GLRX3O76003 335 aaKnown RBP18.72■□□□□ 0.59
FANCA-201ENST00000305699 CCNA1P78396 465 aa18.72■□□□□ 0.59
FANCA-201ENST00000305699 WDR78Q5VTH9 848 aa18.72■□□□□ 0.59
FANCA-201ENST00000305699 SOCS4Q8WXH5 440 aa18.72■□□□□ 0.59
FANCA-201ENST00000305699 SH2D4AQ9H788 454 aa18.72■□□□□ 0.59
FANCA-201ENST00000305699 PLXNB2O15031 1838 aa18.71■□□□□ 0.59
FANCA-201ENST00000305699 SGPL1O95470 568 aa18.71■□□□□ 0.59
FANCA-201ENST00000305699 MX1P20591 662 aa18.71■□□□□ 0.59
FANCA-201ENST00000305699 ATP2B2Q01814 1243 aa18.71■□□□□ 0.59
FANCA-201ENST00000305699 ANKRD45Q5TZF3 282 aa18.71■□□□□ 0.59
FANCA-201ENST00000305699 POTEEQ6S8J3 1075 aa18.71■□□□□ 0.59
FANCA-201ENST00000305699 GPR142Q7Z601 462 aa18.71■□□□□ 0.59
FANCA-201ENST00000305699 PLEKHH3Q7Z736 793 aa18.71■□□□□ 0.59
FANCA-201ENST00000305699 STK11IPQ8N1F8 1099 aa18.71■□□□□ 0.59
FANCA-201ENST00000305699 PI4K2BQ8TCG2 481 aa18.71■□□□□ 0.59
FANCA-201ENST00000305699 FSD1Q9BTV5 496 aa18.71■□□□□ 0.59
FANCA-201ENST00000305699 SPDYE16A6NNV3 312 aaPredicted RBP18.7■□□□□ 0.58
FANCA-201ENST00000305699 GSG1L2A8MUP6 293 aa18.7■□□□□ 0.58
FANCA-201ENST00000305699 MINDY4BA8MYZ0 360 aa18.7■□□□□ 0.58
FANCA-201ENST00000305699 GPAA1O43292 621 aa18.7■□□□□ 0.58
FANCA-201ENST00000305699 CNMDO75829 334 aa18.7■□□□□ 0.58
FANCA-201ENST00000305699 TFRCP02786 760 aaKnown RBP18.7■□□□□ 0.58
FANCA-201ENST00000305699 APPP05067 770 aa18.7■□□□□ 0.58
FANCA-201ENST00000305699 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.7■□□□□ 0.58
FANCA-201ENST00000305699 M0R2C6 588 aa18.69■□□□□ 0.58
FANCA-201ENST00000305699 FARP2O94887 1054 aaPredicted RBP18.69■□□□□ 0.58
FANCA-201ENST00000305699 RGS2P41220 211 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms