RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 GNAQP50148 359 aa16.76■□□□□ 0.27
SHCBP1-201ENST00000303383 NBPF11Q86T75 865 aa16.76■□□□□ 0.27
SHCBP1-201ENST00000303383 TNMDQ9H2S6 317 aa16.76■□□□□ 0.27
SHCBP1-201ENST00000303383 PRPF3O43395 683 aaKnown RBP16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 CCAR1Q8IX12 1150 aaKnown RBP16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 PGBD1Q96JS3 809 aa16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 IL17RBQ9NRM6 502 aa16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 SPTLC2O15270 562 aa16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 WDHD1O75717 1129 aaPredicted RBP16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 MMP1P03956 469 aa16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 CAMK4Q16566 473 aa16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 SOGA3Q5TF21 947 aa16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 ANO1Q5XXA6 986 aa16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 ZDHHC15Q96MV8 337 aa16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 TCP11L1Q9NUJ3 509 aa16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 PIM2Q9P1W9 311 aa16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 SERPINB13Q9UIV8 391 aa16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 CLIC4Q9Y696 253 aa16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 MYH1P12882 1939 aa16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 YEATS4O95619 227 aa16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 TCP10Q12799 353 aa16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 RCSD1Q6JBY9 416 aa16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 APOBEC3HQ6NTF7 200 aaKnown RBP16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 JMYQ8N9B5 988 aa16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 RNF214Q8ND24 703 aa16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 PANK2Q9BZ23 570 aa16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 POLR3EQ9NVU0 708 aa16.75■□□□□ 0.27
SHCBP1-201ENST00000303383 NEDD1Q8NHV4 660 aa16.74■□□□□ 0.27
SHCBP1-201ENST00000303383 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.74■□□□□ 0.27
SHCBP1-201ENST00000303383 OSBPL5Q9H0X9 879 aaPredicted RBP16.74■□□□□ 0.27
SHCBP1-201ENST00000303383 DDX4Q9NQI0 724 aaKnown RBP16.74■□□□□ 0.27
SHCBP1-201ENST00000303383 ZNF277Q9NRM2 450 aaPredicted RBP16.74■□□□□ 0.27
SHCBP1-201ENST00000303383 VPS54Q9P1Q0 977 aa16.74■□□□□ 0.27
SHCBP1-201ENST00000303383 BTBD18B2RXH4 712 aa16.74■□□□□ 0.27
SHCBP1-201ENST00000303383 HDLBPQ00341 1268 aaKnown RBP16.74■□□□□ 0.27
SHCBP1-201ENST00000303383 MAP3K11Q16584 847 aa16.74■□□□□ 0.27
SHCBP1-201ENST00000303383 MPHOSPH10O00566 681 aaKnown RBP16.73■□□□□ 0.27
SHCBP1-201ENST00000303383 NOSTRINQ8IVI9 506 aa16.73■□□□□ 0.27
SHCBP1-201ENST00000303383 FSIP1Q8NA03 581 aa16.73■□□□□ 0.27
SHCBP1-201ENST00000303383 CACNB3P54284 484 aa16.73■□□□□ 0.27
SHCBP1-201ENST00000303383 LINC00301Q8NCQ3 95 aa16.73■□□□□ 0.27
SHCBP1-201ENST00000303383 TMEM47Q9BQJ4 181 aa16.73■□□□□ 0.27
SHCBP1-201ENST00000303383 TMOD2Q9NZR1 351 aa16.73■□□□□ 0.27
SHCBP1-201ENST00000303383 SWAP70Q9UH65 585 aa16.73■□□□□ 0.27
SHCBP1-201ENST00000303383 KINO60870 393 aaKnown RBP16.73■□□□□ 0.27
SHCBP1-201ENST00000303383 RAD17O75943 681 aa16.73■□□□□ 0.27
SHCBP1-201ENST00000303383 ATP2B1P20020 1258 aa16.73■□□□□ 0.27
SHCBP1-201ENST00000303383 SRBD1Q8N5C6 995 aaKnown RBP16.73■□□□□ 0.27
SHCBP1-201ENST00000303383 MRIQ9BWK5 157 aa16.73■□□□□ 0.27
SHCBP1-201ENST00000303383 RBSNQ9H1K0 784 aa16.73■□□□□ 0.27
SHCBP1-201ENST00000303383 SERPINA10Q9UK55 444 aa16.73■□□□□ 0.27
SHCBP1-201ENST00000303383 HDAC9Q9UKV0 1011 aa16.73■□□□□ 0.27
SHCBP1-201ENST00000303383 U2AF2P26368 475 aaKnown RBP eCLIP16.72■□□□□ 0.27
SHCBP1-201ENST00000303383 OGFOD1Q8N543 542 aa16.72■□□□□ 0.27
SHCBP1-201ENST00000303383 PSMD1Q99460 953 aa16.72■□□□□ 0.27
SHCBP1-201ENST00000303383 MTFR1LQ9H019 292 aa16.72■□□□□ 0.27
SHCBP1-201ENST00000303383 FOXP1Q9H334 677 aaPredicted RBP16.72■□□□□ 0.27
SHCBP1-201ENST00000303383 BAZ2BQ9UIF8 2168 aaKnown RBP16.72■□□□□ 0.27
SHCBP1-201ENST00000303383 NIM1KQ8IY84 436 aa16.72■□□□□ 0.27
SHCBP1-201ENST00000303383 ANKS1AQ92625 1134 aa16.72■□□□□ 0.27
SHCBP1-201ENST00000303383 NR1I2O75469 434 aa16.72■□□□□ 0.27
SHCBP1-201ENST00000303383 KRT2P35908 639 aa16.72■□□□□ 0.27
SHCBP1-201ENST00000303383 NLRP5P59047 1200 aa16.72■□□□□ 0.27
SHCBP1-201ENST00000303383 ATP2B2Q01814 1243 aa16.72■□□□□ 0.27
SHCBP1-201ENST00000303383 NFIAQ12857 509 aa16.72■□□□□ 0.27
SHCBP1-201ENST00000303383 PCDHA7Q9UN72 937 aa16.72■□□□□ 0.27
SHCBP1-201ENST00000303383 TOP1P11387 765 aaKnown RBP16.71■□□□□ 0.27
SHCBP1-201ENST00000303383 TGFB2P61812 414 aa16.71■□□□□ 0.27
SHCBP1-201ENST00000303383 DALRD3Q5D0E6 543 aaKnown RBP16.71■□□□□ 0.27
SHCBP1-201ENST00000303383 MRPS27Q92552 414 aaKnown RBP16.71■□□□□ 0.27
SHCBP1-201ENST00000303383 CEP95Q96GE4 821 aa16.71■□□□□ 0.27
SHCBP1-201ENST00000303383 CNTNAP5Q8WYK1 1306 aa16.71■□□□□ 0.27
SHCBP1-201ENST00000303383 MYH6P13533 1939 aa16.71■□□□□ 0.27
SHCBP1-201ENST00000303383 CCDC192P0DO97 292 aa16.71■□□□□ 0.27
SHCBP1-201ENST00000303383 MARCKSP29966 332 aaPredicted RBP16.71■□□□□ 0.27
SHCBP1-201ENST00000303383 CFAP100Q494V2 611 aa16.71■□□□□ 0.27
SHCBP1-201ENST00000303383 DHX36Q9H2U1 1008 aaKnown RBP16.71■□□□□ 0.27
SHCBP1-201ENST00000303383 MYO3BQ8WXR4 1341 aa16.71■□□□□ 0.27
SHCBP1-201ENST00000303383 PARP1P09874 1014 aaKnown RBP16.71■□□□□ 0.26
SHCBP1-201ENST00000303383 SCG2P13521 617 aa16.71■□□□□ 0.26
SHCBP1-201ENST00000303383 GRM4Q14833 912 aa16.71■□□□□ 0.26
SHCBP1-201ENST00000303383 R3HDM1Q15032 1099 aaKnown RBP16.71■□□□□ 0.26
SHCBP1-201ENST00000303383 ADALQ6DHV7 355 aa16.71■□□□□ 0.26
SHCBP1-201ENST00000303383 MAP3K14Q99558 947 aa16.71■□□□□ 0.26
SHCBP1-201ENST00000303383 CDK5RAP2Q96SN8 1893 aa16.7■□□□□ 0.26
SHCBP1-201ENST00000303383 MYH15Q9Y2K3 1946 aa16.7■□□□□ 0.26
SHCBP1-201ENST00000303383 RILPL1Q5EBL4 403 aa16.7■□□□□ 0.26
SHCBP1-201ENST00000303383 CKAP2LQ8IYA6 745 aa16.7■□□□□ 0.26
SHCBP1-201ENST00000303383 PCDHAC2Q9Y5I4 1007 aa16.7■□□□□ 0.26
SHCBP1-201ENST00000303383 YDJCA8MPS7 323 aa16.7■□□□□ 0.26
SHCBP1-201ENST00000303383 EIF6P56537 245 aaKnown RBP16.7■□□□□ 0.26
SHCBP1-201ENST00000303383 NR5A1Q13285 461 aa16.7■□□□□ 0.26
SHCBP1-201ENST00000303383 TDRD3Q9H7E2 651 aaKnown RBP16.7■□□□□ 0.26
SHCBP1-201ENST00000303383 FUT2Q10981 343 aa16.69■□□□□ 0.26
SHCBP1-201ENST00000303383 PKN1Q16512 942 aa16.69■□□□□ 0.26
SHCBP1-201ENST00000303383 SASS6Q6UVJ0 657 aa16.69■□□□□ 0.26
SHCBP1-201ENST00000303383 STAG2Q8N3U4 1231 aa16.69■□□□□ 0.26
SHCBP1-201ENST00000303383 CLSTN2Q9H4D0 955 aa16.69■□□□□ 0.26
SHCBP1-201ENST00000303383 CABP5Q9NP86 173 aa16.69■□□□□ 0.26
SHCBP1-201ENST00000303383 KCNA3P22001 575 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms