RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 ZNF444Q8N0Y2 327 aaPredicted RBP13.92□□□□□ -0.18
TPM3-202ENST00000302206 PHKBQ93100 1093 aa13.92□□□□□ -0.18
TPM3-202ENST00000302206 DYNLL2Q96FJ2 89 aa13.92□□□□□ -0.18
TPM3-202ENST00000302206 ZDHHC15Q96MV8 337 aa13.92□□□□□ -0.18
TPM3-202ENST00000302206 SLC26A6Q9BXS9 759 aa13.92□□□□□ -0.18
TPM3-202ENST00000302206 DBNDD1Q9H9R9 158 aa13.92□□□□□ -0.18
TPM3-202ENST00000302206 RTEL1Q9NZ71 1219 aa13.92□□□□□ -0.18
TPM3-202ENST00000302206 TFIP11Q9UBB9 837 aaKnown RBP13.92□□□□□ -0.18
TPM3-202ENST00000302206 MYO3BQ8WXR4 1341 aa13.91□□□□□ -0.18
TPM3-202ENST00000302206 PRPF3O43395 683 aaKnown RBP13.91□□□□□ -0.18
TPM3-202ENST00000302206 RASA1P20936 1047 aa13.91□□□□□ -0.18
TPM3-202ENST00000302206 U2AF2P26368 475 aaKnown RBP eCLIP13.91□□□□□ -0.185e-7■■■■□ 22.9
TPM3-202ENST00000302206 CRKP46108 304 aa13.91□□□□□ -0.18
TPM3-202ENST00000302206 CDK8P49336 464 aa13.91□□□□□ -0.18
TPM3-202ENST00000302206 PLCD1P51178 756 aa13.91□□□□□ -0.18
TPM3-202ENST00000302206 FOSBP53539 338 aa13.91□□□□□ -0.18
TPM3-202ENST00000302206 FUT2Q10981 343 aa13.91□□□□□ -0.18
TPM3-202ENST00000302206 FAM47AQ5JRC9 791 aa13.91□□□□□ -0.18
TPM3-202ENST00000302206 GAS2L3Q86XJ1 694 aa13.91□□□□□ -0.18
TPM3-202ENST00000302206 NEDD1Q8NHV4 660 aa13.91□□□□□ -0.18
TPM3-202ENST00000302206 NUP133Q8WUM0 1156 aa13.91□□□□□ -0.18
TPM3-202ENST00000302206 GRPEL1Q9HAV7 217 aa13.91□□□□□ -0.18
TPM3-202ENST00000302206 USP40Q9NVE5 1235 aa13.91□□□□□ -0.18
TPM3-202ENST00000302206 SAP30BPQ9UHR5 308 aaKnown RBP13.91□□□□□ -0.18
TPM3-202ENST00000302206 SERPINA10Q9UK55 444 aa13.91□□□□□ -0.18
TPM3-202ENST00000302206 PSME4Q14997 1843 aa13.91□□□□□ -0.18
TPM3-202ENST00000302206 PLIN4Q96Q06 1357 aa13.91□□□□□ -0.18
TPM3-202ENST00000302206 GOLGA6L4A6NEF3 574 aa13.9□□□□□ -0.18
TPM3-202ENST00000302206 PPFIA3O75145 1194 aa13.9□□□□□ -0.18
TPM3-202ENST00000302206 WDHD1O75717 1129 aaPredicted RBP13.9□□□□□ -0.18
TPM3-202ENST00000302206 YEATS4O95619 227 aa13.9□□□□□ -0.18
TPM3-202ENST00000302206 TSPY3P0CV98 308 aa13.9□□□□□ -0.18
TPM3-202ENST00000302206 TSPY8P0CW00 308 aa13.9□□□□□ -0.18
TPM3-202ENST00000302206 KIF5BP33176 963 aa13.9□□□□□ -0.18
TPM3-202ENST00000302206 NOVP48745 357 aa13.9□□□□□ -0.18
TPM3-202ENST00000302206 NASPP49321 788 aaPredicted RBP13.9□□□□□ -0.18
TPM3-202ENST00000302206 AKAP17AQ02040 695 aaKnown RBP13.9□□□□□ -0.18
TPM3-202ENST00000302206 RASSF7Q02833 373 aa13.9□□□□□ -0.18
TPM3-202ENST00000302206 MYSM1Q5VVJ2 828 aa13.9□□□□□ -0.18
TPM3-202ENST00000302206 APOBEC3HQ6NTF7 200 aaKnown RBP13.9□□□□□ -0.18
TPM3-202ENST00000302206 TMTC3Q6ZXV5 915 aa13.9□□□□□ -0.18
TPM3-202ENST00000302206 CTCFLQ8NI51 663 aaPredicted RBP13.9□□□□□ -0.18
TPM3-202ENST00000302206 USP28Q96RU2 1077 aa13.9□□□□□ -0.18
TPM3-202ENST00000302206 KAT14Q9H8E8 782 aa13.9□□□□□ -0.18
TPM3-202ENST00000302206 IL17RBQ9NRM6 502 aa13.9□□□□□ -0.18
TPM3-202ENST00000302206 POLR3EQ9NVU0 708 aa13.9□□□□□ -0.18
TPM3-202ENST00000302206 SWAP70Q9UH65 585 aa13.9□□□□□ -0.18
TPM3-202ENST00000302206 SCN9AQ15858 1988 aa13.89□□□□□ -0.19
TPM3-202ENST00000302206 GLTPD2A6NH11 291 aa13.89□□□□□ -0.19
TPM3-202ENST00000302206 F8W031 263 aaPredicted RBP13.89□□□□□ -0.19
TPM3-202ENST00000302206 C21orf2O43822 256 aa13.89□□□□□ -0.19
TPM3-202ENST00000302206 XBP1P17861 261 aa13.89□□□□□ -0.19
TPM3-202ENST00000302206 GNAQP50148 359 aa13.89□□□□□ -0.19
TPM3-202ENST00000302206 GABPAQ06546 454 aa13.89□□□□□ -0.19
TPM3-202ENST00000302206 SAFBQ15424 915 aaKnown RBP eCLIP13.89□□□□□ -0.19
TPM3-202ENST00000302206 AOC3Q16853 763 aa13.89□□□□□ -0.19
TPM3-202ENST00000302206 OTUD7BQ6GQQ9 843 aa13.89□□□□□ -0.19
TPM3-202ENST00000302206 CDC42EP5Q6NZY7 148 aa13.89□□□□□ -0.19
TPM3-202ENST00000302206 MXD3Q9BW11 206 aa13.89□□□□□ -0.19
TPM3-202ENST00000302206 EHD4Q9H223 541 aa13.89□□□□□ -0.19
TPM3-202ENST00000302206 DDX19AQ9NUU7 478 aaKnown RBP13.89□□□□□ -0.19
TPM3-202ENST00000302206 ZNF219Q9P2Y4 722 aaPredicted RBP13.89□□□□□ -0.19
TPM3-202ENST00000302206 KIF28PB7ZC32 967 aa13.88□□□□□ -0.19
TPM3-202ENST00000302206 PPIP5K2O43314 1243 aa13.88□□□□□ -0.19
TPM3-202ENST00000302206 NMT2O60551 498 aa13.88□□□□□ -0.19
TPM3-202ENST00000302206 MMP1P03956 469 aa13.88□□□□□ -0.19
TPM3-202ENST00000302206 XRCC6P12956 609 aaKnown RBP eCLIP13.88□□□□□ -0.199e-13■□□□□ 8.6
TPM3-202ENST00000302206 GRM4Q14833 912 aa13.88□□□□□ -0.19
TPM3-202ENST00000302206 FAM177A1Q8N128 213 aaPredicted RBP13.88□□□□□ -0.19
TPM3-202ENST00000302206 KCNG4Q8TDN1 519 aa13.88□□□□□ -0.19
TPM3-202ENST00000302206 PGBD1Q96JS3 809 aa13.88□□□□□ -0.19
TPM3-202ENST00000302206 AIFM3Q96NN9 605 aa13.88□□□□□ -0.19
TPM3-202ENST00000302206 LZTS2Q9BRK4 669 aa13.88□□□□□ -0.19
TPM3-202ENST00000302206 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.88□□□□□ -0.19
TPM3-202ENST00000302206 IDI2Q9BXS1 227 aa13.88□□□□□ -0.19
TPM3-202ENST00000302206 OSBPL5Q9H0X9 879 aaPredicted RBP13.88□□□□□ -0.19
TPM3-202ENST00000302206 FOXP1Q9H334 677 aaPredicted RBP13.88□□□□□ -0.19
TPM3-202ENST00000302206 CNTNAP5Q8WYK1 1306 aa13.88□□□□□ -0.19
TPM3-202ENST00000302206 COL2A1P02458 1487 aaPredicted RBP13.87□□□□□ -0.19
TPM3-202ENST00000302206 A0A1W2PQ27 194 aa13.87□□□□□ -0.19
TPM3-202ENST00000302206 A0A1W2PQ64 194 aa13.87□□□□□ -0.19
TPM3-202ENST00000302206 A0A1W2PQD8 194 aa13.87□□□□□ -0.19
TPM3-202ENST00000302206 SYCE3A1L190 88 aa13.87□□□□□ -0.19
TPM3-202ENST00000302206 SPDYE4A6NLX3 237 aa13.87□□□□□ -0.19
TPM3-202ENST00000302206 LMNB1P20700 586 aa13.87□□□□□ -0.19
TPM3-202ENST00000302206 SCNN1DP51172 638 aa13.87□□□□□ -0.19
TPM3-202ENST00000302206 PKN1Q16512 942 aa13.87□□□□□ -0.19
TPM3-202ENST00000302206 PPP4R3BQ5MIZ7 849 aa13.87□□□□□ -0.19
TPM3-202ENST00000302206 LINC00301Q8NCQ3 95 aa13.87□□□□□ -0.19
TPM3-202ENST00000302206 PNMA1Q8ND90 353 aa13.87□□□□□ -0.19
TPM3-202ENST00000302206 DHX36Q9H2U1 1008 aaKnown RBP13.87□□□□□ -0.19
TPM3-202ENST00000302206 DDX4Q9NQI0 724 aaKnown RBP13.87□□□□□ -0.19
TPM3-202ENST00000302206 KCNQ5Q9NR82 932 aa13.87□□□□□ -0.19
TPM3-202ENST00000302206 GJB4Q9NTQ9 266 aa13.87□□□□□ -0.19
TPM3-202ENST00000302206 ADAMTSL1Q8N6G6 1762 aa13.86□□□□□ -0.19
TPM3-202ENST00000302206 MYH6P13533 1939 aa13.86□□□□□ -0.19
TPM3-202ENST00000302206 PLEKHA8P1O95397 391 aa13.86□□□□□ -0.19
TPM3-202ENST00000302206 HLA-DOAP06340 250 aa13.86□□□□□ -0.19
TPM3-202ENST00000302206 TOP1P11387 765 aaKnown RBP13.86□□□□□ -0.19
TPM3-202ENST00000302206 GUCY1A2P33402 732 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms