RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 ERVV-1B6SEH8 477 aa17.83■□□□□ 0.44
CHAF1A-201ENST00000301280 XBP1P17861 261 aa17.83■□□□□ 0.44
CHAF1A-201ENST00000301280 CLEC10AQ8IUN9 316 aa17.83■□□□□ 0.44
CHAF1A-201ENST00000301280 NLRP12P59046 1061 aa17.82■□□□□ 0.44
CHAF1A-201ENST00000301280 METTL16Q86W50 562 aaKnown RBP17.82■□□□□ 0.44
CHAF1A-201ENST00000301280 CRACR2BQ8N4Y2 399 aaPredicted RBP17.82■□□□□ 0.44
CHAF1A-201ENST00000301280 RTCBQ9Y3I0 505 aaKnown RBP17.82■□□□□ 0.44
CHAF1A-201ENST00000301280 TRIM75PA6NK02 468 aa17.82■□□□□ 0.44
CHAF1A-201ENST00000301280 FGFR2P21802 821 aa17.82■□□□□ 0.44
CHAF1A-201ENST00000301280 PARP10Q53GL7 1025 aa17.82■□□□□ 0.44
CHAF1A-201ENST00000301280 UTP14CQ5TAP6 766 aaKnown RBP17.82■□□□□ 0.44
CHAF1A-201ENST00000301280 ZSCAN10Q96SZ4 725 aaPredicted RBP17.82■□□□□ 0.44
CHAF1A-201ENST00000301280 ADAMTS3O15072 1205 aa17.82■□□□□ 0.44
CHAF1A-201ENST00000301280 NTRK3Q16288 839 aa17.82■□□□□ 0.44
CHAF1A-201ENST00000301280 GRIK5Q16478 980 aa17.82■□□□□ 0.44
CHAF1A-201ENST00000301280 FAM196AQ6ZSG2 479 aa17.82■□□□□ 0.44
CHAF1A-201ENST00000301280 RTL9Q8NET4 1388 aa17.81■□□□□ 0.44
CHAF1A-201ENST00000301280 TOB1P50616 345 aaPredicted RBP17.81■□□□□ 0.44
CHAF1A-201ENST00000301280 TPTE2Q6XPS3 522 aa17.81■□□□□ 0.44
CHAF1A-201ENST00000301280 LZTFL1Q9NQ48 299 aa17.81■□□□□ 0.44
CHAF1A-201ENST00000301280 RNF216Q9NWF9 866 aaPredicted RBP17.81■□□□□ 0.44
CHAF1A-201ENST00000301280 A0A1W2PQ27 194 aa17.81■□□□□ 0.44
CHAF1A-201ENST00000301280 A0A1W2PQ64 194 aa17.81■□□□□ 0.44
CHAF1A-201ENST00000301280 A0A1W2PQD8 194 aa17.81■□□□□ 0.44
CHAF1A-201ENST00000301280 PP2D1A8MPX8 630 aa17.81■□□□□ 0.44
CHAF1A-201ENST00000301280 ELF2Q15723 593 aa17.81■□□□□ 0.44
CHAF1A-201ENST00000301280 COL24A1Q17RW2 1714 aa17.81■□□□□ 0.44
CHAF1A-201ENST00000301280 CCDC196A0A1B0GTZ2 297 aa17.8■□□□□ 0.44
CHAF1A-201ENST00000301280 MMP1P03956 469 aa17.8■□□□□ 0.44
CHAF1A-201ENST00000301280 KRBA2Q6ZNG9 492 aa17.8■□□□□ 0.44
CHAF1A-201ENST00000301280 NBPF11Q86T75 865 aa17.8■□□□□ 0.44
CHAF1A-201ENST00000301280 MYH6P13533 1939 aa17.8■□□□□ 0.44
CHAF1A-201ENST00000301280 MYL5Q02045 173 aa17.8■□□□□ 0.44
CHAF1A-201ENST00000301280 STAG2Q8N3U4 1231 aa17.8■□□□□ 0.44
CHAF1A-201ENST00000301280 NOL10Q9BSC4 688 aaKnown RBP17.8■□□□□ 0.44
CHAF1A-201ENST00000301280 UBA5Q9GZZ9 404 aa17.8■□□□□ 0.44
CHAF1A-201ENST00000301280 LAMB1P07942 1786 aa17.8■□□□□ 0.44
CHAF1A-201ENST00000301280 SMTNL1A8MU46 457 aa17.8■□□□□ 0.44
CHAF1A-201ENST00000301280 DEXIO95424 95 aa17.8■□□□□ 0.44
CHAF1A-201ENST00000301280 CACNA1SQ13698 1873 aa17.8■□□□□ 0.44
CHAF1A-201ENST00000301280 POSTNQ15063 836 aa17.8■□□□□ 0.44
CHAF1A-201ENST00000301280 ALX1Q15699 326 aa17.8■□□□□ 0.44
CHAF1A-201ENST00000301280 ARMCX5Q6P1M9 558 aa17.8■□□□□ 0.44
CHAF1A-201ENST00000301280 PCMTD1Q96MG8 357 aaPredicted RBP17.8■□□□□ 0.44
CHAF1A-201ENST00000301280 KAT14Q9H8E8 782 aa17.8■□□□□ 0.44
CHAF1A-201ENST00000301280 FMR1Q06787 632 aaKnown RBP eCLIP17.79■□□□□ 0.443e-6■■■□□ 14.9
CHAF1A-201ENST00000301280 PTGDRQ13258 359 aa17.79■□□□□ 0.44
CHAF1A-201ENST00000301280 CRNKL1Q9BZJ0 848 aaKnown RBP17.79■□□□□ 0.44
CHAF1A-201ENST00000301280 VPS16Q9H269 839 aa17.79■□□□□ 0.44
CHAF1A-201ENST00000301280 BRMS1Q9HCU9 246 aa17.79■□□□□ 0.44
CHAF1A-201ENST00000301280 COL4A1P02462 1669 aa17.79■□□□□ 0.44
CHAF1A-201ENST00000301280 SPATA31A1Q5TZJ5 1347 aa17.79■□□□□ 0.44
CHAF1A-201ENST00000301280 FMNL1O95466 1100 aaPredicted RBP17.79■□□□□ 0.44
CHAF1A-201ENST00000301280 TSPY3P0CV98 308 aa17.79■□□□□ 0.44
CHAF1A-201ENST00000301280 TSPY8P0CW00 308 aa17.79■□□□□ 0.44
CHAF1A-201ENST00000301280 ZNF444Q8N0Y2 327 aaPredicted RBP17.79■□□□□ 0.44
CHAF1A-201ENST00000301280 WASF1Q92558 559 aa17.79■□□□□ 0.44
CHAF1A-201ENST00000301280 SYMPKQ92797 1274 aaKnown RBP17.79■□□□□ 0.44
CHAF1A-201ENST00000301280 HINFPQ9BQA5 517 aa17.79■□□□□ 0.44
CHAF1A-201ENST00000301280 MAST2Q6P0Q8 1798 aa17.79■□□□□ 0.44
CHAF1A-201ENST00000301280 CTR9Q6PD62 1173 aa17.78■□□□□ 0.44
CHAF1A-201ENST00000301280 TRMT1LQ7Z2T5 733 aaKnown RBP17.78■□□□□ 0.44
CHAF1A-201ENST00000301280 ARHGEF1Q92888 912 aaKnown RBP17.78■□□□□ 0.44
CHAF1A-201ENST00000301280 MPHOSPH10O00566 681 aaKnown RBP17.78■□□□□ 0.44
CHAF1A-201ENST00000301280 IFNAR1P17181 557 aa17.78■□□□□ 0.44
CHAF1A-201ENST00000301280 KCND1Q9NSA2 647 aa17.78■□□□□ 0.44
CHAF1A-201ENST00000301280 FAM237AA0A1B0GTK4 181 aa17.78■□□□□ 0.44
CHAF1A-201ENST00000301280 LRRN4CLQ8ND94 238 aa17.78■□□□□ 0.44
CHAF1A-201ENST00000301280 MXD3Q9BW11 206 aa17.78■□□□□ 0.44
CHAF1A-201ENST00000301280 IRX2Q9BZI1 471 aaPredicted RBP17.78■□□□□ 0.44
CHAF1A-201ENST00000301280 MARCH6O60337 910 aa17.77■□□□□ 0.44
CHAF1A-201ENST00000301280 UFL1O94874 794 aa17.77■□□□□ 0.44
CHAF1A-201ENST00000301280 KRT2P35908 639 aa17.77■□□□□ 0.44
CHAF1A-201ENST00000301280 KIF18AQ8NI77 898 aa17.77■□□□□ 0.44
CHAF1A-201ENST00000301280 RPGRQ92834 1020 aaKnown RBP17.77■□□□□ 0.44
CHAF1A-201ENST00000301280 BPIFA3Q9BQP9 254 aa17.77■□□□□ 0.44
CHAF1A-201ENST00000301280 MYH13Q9UKX3 1938 aa17.77■□□□□ 0.44
CHAF1A-201ENST00000301280 SSBP05455 408 aaKnown RBP eCLIP17.77■□□□□ 0.44
CHAF1A-201ENST00000301280 LDHBP07195 334 aaKnown RBP17.77■□□□□ 0.44
CHAF1A-201ENST00000301280 ERCC6LQ2NKX8 1250 aa17.77■□□□□ 0.44
CHAF1A-201ENST00000301280 RRAGBQ5VZM2 374 aa17.77■□□□□ 0.44
CHAF1A-201ENST00000301280 MSL1Q68DK7 614 aa17.77■□□□□ 0.44
CHAF1A-201ENST00000301280 SH3RF3Q8TEJ3 882 aaPredicted RBP17.77■□□□□ 0.44
CHAF1A-201ENST00000301280 MYH2Q9UKX2 1941 aa17.77■□□□□ 0.43
CHAF1A-201ENST00000301280 SCNN1DP51172 638 aa17.77■□□□□ 0.43
CHAF1A-201ENST00000301280 RBM5P52756 815 aaKnown RBP eCLIP17.77■□□□□ 0.434e-6■■□□□ 12.4
CHAF1A-201ENST00000301280 HOOK1Q9UJC3 728 aaKnown RBP17.77■□□□□ 0.43
CHAF1A-201ENST00000301280 ZNF804BA4D1E1 1349 aa17.76■□□□□ 0.43
CHAF1A-201ENST00000301280 GNG11P61952 73 aa17.76■□□□□ 0.43
CHAF1A-201ENST00000301280 PTPAQ15257 358 aa17.76■□□□□ 0.43
CHAF1A-201ENST00000301280 USP21Q9UK80 565 aa17.76■□□□□ 0.43
CHAF1A-201ENST00000301280 MTF1Q14872 753 aa17.76■□□□□ 0.43
CHAF1A-201ENST00000301280 SRBD1Q8N5C6 995 aaKnown RBP17.76■□□□□ 0.43
CHAF1A-201ENST00000301280 MNS1Q8NEH6 495 aa17.76■□□□□ 0.43
CHAF1A-201ENST00000301280 ZNF384Q8TF68 577 aa17.76■□□□□ 0.43
CHAF1A-201ENST00000301280 MRFAP1L1Q96HT8 127 aa17.76■□□□□ 0.43
CHAF1A-201ENST00000301280 MAN1B1Q9UKM7 699 aa17.76■□□□□ 0.43
CHAF1A-201ENST00000301280 FAM196BA6NMK8 535 aa17.75■□□□□ 0.43
CHAF1A-201ENST00000301280 GNAT2P19087 354 aa17.75■□□□□ 0.43
CHAF1A-201ENST00000301280 BMP6P22004 513 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms