RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 TMOD2Q9NZR1 351 aa18.24■□□□□ 0.51
HERPUD1-201ENST00000300302 STX8Q9UNK0 236 aa18.24■□□□□ 0.51
HERPUD1-201ENST00000300302 BRAPQ7Z569 592 aa18.23■□□□□ 0.51
HERPUD1-201ENST00000300302 CCDC82Q8N4S0 544 aa18.23■□□□□ 0.51
HERPUD1-201ENST00000300302 ZNF396Q96N95 335 aaPredicted RBP18.23■□□□□ 0.51
HERPUD1-201ENST00000300302 ELP1O95163 1332 aa18.23■□□□□ 0.51
HERPUD1-201ENST00000300302 LTBP3Q9NS15 1303 aa18.23■□□□□ 0.51
HERPUD1-201ENST00000300302 PLIN4Q96Q06 1357 aa18.23■□□□□ 0.51
HERPUD1-201ENST00000300302 ENTPD3O75355 529 aa18.22■□□□□ 0.51
HERPUD1-201ENST00000300302 CACNB3P54284 484 aa18.22■□□□□ 0.51
HERPUD1-201ENST00000300302 TCP10Q12799 353 aa18.22■□□□□ 0.51
HERPUD1-201ENST00000300302 TNIP1Q15025 636 aa18.22■□□□□ 0.51
HERPUD1-201ENST00000300302 DLGAP5Q15398 846 aa18.22■□□□□ 0.51
HERPUD1-201ENST00000300302 KRT40Q6A162 431 aa18.22■□□□□ 0.51
HERPUD1-201ENST00000300302 OTUD7BQ6GQQ9 843 aa18.22■□□□□ 0.51
HERPUD1-201ENST00000300302 TMTC3Q6ZXV5 915 aa18.22■□□□□ 0.51
HERPUD1-201ENST00000300302 SPATA32Q96LK8 384 aa18.22■□□□□ 0.51
HERPUD1-201ENST00000300302 AIFM3Q96NN9 605 aa18.22■□□□□ 0.51
HERPUD1-201ENST00000300302 TDRD3Q9H7E2 651 aaKnown RBP18.22■□□□□ 0.51
HERPUD1-201ENST00000300302 PI4KBQ9UBF8 816 aa18.22■□□□□ 0.51
HERPUD1-201ENST00000300302 FAM198AQ9UFP1 575 aa18.22■□□□□ 0.51
HERPUD1-201ENST00000300302 SPDYE2BA6NHP3 402 aa18.22■□□□□ 0.51
HERPUD1-201ENST00000300302 SPDYE6P0CI01 402 aa18.22■□□□□ 0.51
HERPUD1-201ENST00000300302 CXCL9Q07325 125 aa18.22■□□□□ 0.51
HERPUD1-201ENST00000300302 CIAPIN1Q6FI81 312 aa18.22■□□□□ 0.51
HERPUD1-201ENST00000300302 ZSCAN29Q8IWY8 852 aaPredicted RBP18.22■□□□□ 0.51
HERPUD1-201ENST00000300302 CMTR1Q8N1G2 835 aaKnown RBP18.22■□□□□ 0.51
HERPUD1-201ENST00000300302 PRMT6Q96LA8 375 aaPredicted RBP18.22■□□□□ 0.51
HERPUD1-201ENST00000300302 MYH8P13535 1937 aa18.21■□□□□ 0.51
HERPUD1-201ENST00000300302 MYH15Q9Y2K3 1946 aa18.21■□□□□ 0.51
HERPUD1-201ENST00000300302 PRPF3O43395 683 aaKnown RBP18.21■□□□□ 0.51
HERPUD1-201ENST00000300302 XBP1P17861 261 aa18.21■□□□□ 0.51
HERPUD1-201ENST00000300302 GNAQP50148 359 aa18.21■□□□□ 0.51
HERPUD1-201ENST00000300302 MMP14P50281 582 aa18.21■□□□□ 0.51
HERPUD1-201ENST00000300302 CAVIN1Q6NZI2 390 aaKnown RBP18.21■□□□□ 0.51
HERPUD1-201ENST00000300302 TMEM47Q9BQJ4 181 aa18.21■□□□□ 0.51
HERPUD1-201ENST00000300302 TRIM34Q9BYJ4 488 aa18.21■□□□□ 0.51
HERPUD1-201ENST00000300302 TFIP11Q9UBB9 837 aaKnown RBP18.21■□□□□ 0.51
HERPUD1-201ENST00000300302 ZBTB12Q9Y330 459 aaPredicted RBP18.21■□□□□ 0.51
HERPUD1-201ENST00000300302 GADD45BO75293 160 aaPredicted RBP18.2■□□□□ 0.5
HERPUD1-201ENST00000300302 PLEKHA8P1O95397 391 aa18.2■□□□□ 0.5
HERPUD1-201ENST00000300302 KIF23Q02241 960 aaPredicted RBP18.2■□□□□ 0.5
HERPUD1-201ENST00000300302 GNL2Q13823 731 aaKnown RBP18.2■□□□□ 0.5
HERPUD1-201ENST00000300302 ZFPM1Q8IX07 1006 aa18.2■□□□□ 0.5
HERPUD1-201ENST00000300302 SYAP1Q96A49 352 aaPredicted RBP18.2■□□□□ 0.5
HERPUD1-201ENST00000300302 CCDC17Q96LX7 622 aa18.2■□□□□ 0.5
HERPUD1-201ENST00000300302 GJB4Q9NTQ9 266 aa18.2■□□□□ 0.5
HERPUD1-201ENST00000300302 COL2A1P02458 1487 aaPredicted RBP18.2■□□□□ 0.5
HERPUD1-201ENST00000300302 TOP1P11387 765 aaKnown RBP18.2■□□□□ 0.5
HERPUD1-201ENST00000300302 PRELPP51888 382 aa18.2■□□□□ 0.5
HERPUD1-201ENST00000300302 FUT2Q10981 343 aa18.2■□□□□ 0.5
HERPUD1-201ENST00000300302 GRM4Q14833 912 aa18.2■□□□□ 0.5
HERPUD1-201ENST00000300302 SAFBQ15424 915 aaKnown RBP eCLIP18.2■□□□□ 0.5
HERPUD1-201ENST00000300302 PPP4R3BQ5MIZ7 849 aa18.2■□□□□ 0.5
HERPUD1-201ENST00000300302 FOXP4Q8IVH2 680 aaPredicted RBP18.2■□□□□ 0.5
HERPUD1-201ENST00000300302 CEP95Q96GE4 821 aa18.2■□□□□ 0.5
HERPUD1-201ENST00000300302 RBM27Q9P2N5 1060 aaKnown RBP18.2■□□□□ 0.5
HERPUD1-201ENST00000300302 ARFGEF1Q9Y6D6 1849 aa18.19■□□□□ 0.5
HERPUD1-201ENST00000300302 GUCY1A2P33402 732 aa18.19■□□□□ 0.5
HERPUD1-201ENST00000300302 SHMT1P34896 483 aa18.19■□□□□ 0.5
HERPUD1-201ENST00000300302 NOVP48745 357 aa18.19■□□□□ 0.5
HERPUD1-201ENST00000300302 MTMR14Q8NCE2 650 aa18.19■□□□□ 0.5
HERPUD1-201ENST00000300302 LEO1Q8WVC0 666 aaPredicted RBP18.19■□□□□ 0.5
HERPUD1-201ENST00000300302 ATRNL1Q5VV63 1379 aa18.18■□□□□ 0.5
HERPUD1-201ENST00000300302 GOLGA6L4A6NEF3 574 aa18.18■□□□□ 0.5
HERPUD1-201ENST00000300302 DDTLA6NHG4 134 aaPredicted RBP18.18■□□□□ 0.5
HERPUD1-201ENST00000300302 AKR1B1P15121 316 aa18.18■□□□□ 0.5
HERPUD1-201ENST00000300302 SRBD1Q8N5C6 995 aaKnown RBP18.18■□□□□ 0.5
HERPUD1-201ENST00000300302 MTMR4Q9NYA4 1195 aa18.18■□□□□ 0.5
HERPUD1-201ENST00000300302 V9GY48 417 aaPredicted RBP18.18■□□□□ 0.5
HERPUD1-201ENST00000300302 MYH6P13533 1939 aa18.18■□□□□ 0.5
HERPUD1-201ENST00000300302 CNTNAP5Q8WYK1 1306 aa18.18■□□□□ 0.5
HERPUD1-201ENST00000300302 MYO1BO43795 1136 aa18.18■□□□□ 0.5
HERPUD1-201ENST00000300302 ARHGAP27Q6ZUM4 889 aa18.18■□□□□ 0.5
HERPUD1-201ENST00000300302 LZTS2Q9BRK4 669 aa18.18■□□□□ 0.5
HERPUD1-201ENST00000300302 UBE2Q2LH0YL09 131 aa18.17■□□□□ 0.5
HERPUD1-201ENST00000300302 MMP1P03956 469 aa18.17■□□□□ 0.5
HERPUD1-201ENST00000300302 RPS12P25398 132 aaKnown RBP18.17■□□□□ 0.5
HERPUD1-201ENST00000300302 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.17■□□□□ 0.5
HERPUD1-201ENST00000300302 ZNF70Q9UC06 446 aaPredicted RBP18.17■□□□□ 0.5
HERPUD1-201ENST00000300302 IGKV6D-41A0A0C4DH26 115 aa18.16■□□□□ 0.5
HERPUD1-201ENST00000300302 TTLL1O95922 423 aa18.16■□□□□ 0.5
HERPUD1-201ENST00000300302 U2AF2P26368 475 aaKnown RBP eCLIP18.16■□□□□ 0.55e-8■■□□□ 14.2
HERPUD1-201ENST00000300302 SPDYE2Q495Y8 402 aa18.16■□□□□ 0.5
HERPUD1-201ENST00000300302 MYSM1Q5VVJ2 828 aa18.16■□□□□ 0.5
HERPUD1-201ENST00000300302 SH3BP5LQ7L8J4 393 aa18.16■□□□□ 0.5
HERPUD1-201ENST00000300302 MAD2L2Q9UI95 211 aa18.16■□□□□ 0.5
HERPUD1-201ENST00000300302 SRCAPQ6ZRS2 3230 aa18.16■□□□□ 0.5
HERPUD1-201ENST00000300302 KIF28PB7ZC32 967 aa18.16■□□□□ 0.5
HERPUD1-201ENST00000300302 MPHOSPH10O00566 681 aaKnown RBP18.16■□□□□ 0.5
HERPUD1-201ENST00000300302 EIF6P56537 245 aaKnown RBP18.16■□□□□ 0.5
HERPUD1-201ENST00000300302 PKN1Q16512 942 aa18.16■□□□□ 0.5
HERPUD1-201ENST00000300302 FKBP1CQ5VVH2 108 aa18.16■□□□□ 0.5
HERPUD1-201ENST00000300302 METTL16Q86W50 562 aaKnown RBP18.16■□□□□ 0.5
HERPUD1-201ENST00000300302 USP28Q96RU2 1077 aa18.16■□□□□ 0.5
HERPUD1-201ENST00000300302 RCOR1Q9UKL0 485 aa18.16■□□□□ 0.5
HERPUD1-201ENST00000300302 CLRN2A0PK11 232 aa18.15■□□□□ 0.5
HERPUD1-201ENST00000300302 PARP1P09874 1014 aaKnown RBP18.15■□□□□ 0.5
HERPUD1-201ENST00000300302 CEBPZQ03701 1054 aaKnown RBP18.15■□□□□ 0.5
HERPUD1-201ENST00000300302 ZSCAN23Q3MJ62 389 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms