RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 LAMB4A4D0S4 1761 aa15.29■□□□□ 0.04
CTDP1-202ENST00000299543 PES1O00541 588 aaKnown RBP15.28■□□□□ 0.04
CTDP1-202ENST00000299543 EFCC1Q9HA90 598 aa15.28■□□□□ 0.04
CTDP1-202ENST00000299543 LZTFL1Q9NQ48 299 aa15.28■□□□□ 0.04
CTDP1-202ENST00000299543 CEP131Q9UPN4 1083 aa15.28■□□□□ 0.04
CTDP1-202ENST00000299543 PPP2R2CQ9Y2T4 447 aa15.28■□□□□ 0.04
CTDP1-202ENST00000299543 MYO5AQ9Y4I1 1855 aaKnown RBP15.28■□□□□ 0.04
CTDP1-202ENST00000299543 ZSCAN12O43309 604 aa15.28■□□□□ 0.04
CTDP1-202ENST00000299543 TMCO3Q6UWJ1 677 aa15.28■□□□□ 0.04
CTDP1-202ENST00000299543 TOGARAM2Q6ZUX3 1019 aa15.28■□□□□ 0.04
CTDP1-202ENST00000299543 BLZF1Q9H2G9 400 aa15.28■□□□□ 0.04
CTDP1-202ENST00000299543 FOXP1Q9H334 677 aaPredicted RBP15.28■□□□□ 0.04
CTDP1-202ENST00000299543 MAPK8IP1Q9UQF2 711 aa15.28■□□□□ 0.04
CTDP1-202ENST00000299543 NUTM2BA6NNL0 878 aaPredicted RBP15.28■□□□□ 0.04
CTDP1-202ENST00000299543 NUTM2EB1AL46 878 aaPredicted RBP15.28■□□□□ 0.04
CTDP1-202ENST00000299543 USP17L12C9JPN9 530 aa15.28■□□□□ 0.04
CTDP1-202ENST00000299543 USP17L21D6R901 530 aa15.28■□□□□ 0.04
CTDP1-202ENST00000299543 EIF5P55010 431 aaKnown RBP15.28■□□□□ 0.04
CTDP1-202ENST00000299543 IQCA1Q86XH1 822 aa15.28■□□□□ 0.04
CTDP1-202ENST00000299543 NUTM2AQ8IVF1 878 aaPredicted RBP15.28■□□□□ 0.04
CTDP1-202ENST00000299543 GNL3LQ9NVN8 582 aaKnown RBP15.28■□□□□ 0.04
CTDP1-202ENST00000299543 RRP15Q9Y3B9 282 aaKnown RBP15.28■□□□□ 0.04
CTDP1-202ENST00000299543 TEX33O43247 280 aa15.27■□□□□ 0.04
CTDP1-202ENST00000299543 CCP110O43303 1012 aa15.27■□□□□ 0.04
CTDP1-202ENST00000299543 CDC25AP30304 524 aa15.27■□□□□ 0.04
CTDP1-202ENST00000299543 MTF1Q14872 753 aa15.27■□□□□ 0.04
CTDP1-202ENST00000299543 SPECC1LQ69YQ0 1117 aa15.27■□□□□ 0.04
CTDP1-202ENST00000299543 IRX2Q9BZI1 471 aaPredicted RBP15.27■□□□□ 0.04
CTDP1-202ENST00000299543 TFCP2L1Q9NZI6 479 aa15.27■□□□□ 0.04
CTDP1-202ENST00000299543 DACH1Q9UI36 760 aa15.27■□□□□ 0.04
CTDP1-202ENST00000299543 LOC102724428A0A0B4J2F2 783 aa15.27■□□□□ 0.04
CTDP1-202ENST00000299543 SIK1P57059 783 aa15.27■□□□□ 0.04
CTDP1-202ENST00000299543 ANKRD18AQ8IVF6 992 aa15.27■□□□□ 0.04
CTDP1-202ENST00000299543 ENAHQ8N8S7 591 aaPredicted RBP15.27■□□□□ 0.04
CTDP1-202ENST00000299543 MLKLQ8NB16 471 aa15.27■□□□□ 0.04
CTDP1-202ENST00000299543 RASSF8Q8NHQ8 419 aa15.27■□□□□ 0.04
CTDP1-202ENST00000299543 GEMIN8Q9NWZ8 242 aaKnown RBP15.27■□□□□ 0.04
CTDP1-202ENST00000299543 NUP188Q5SRE5 1749 aa15.27■□□□□ 0.03
CTDP1-202ENST00000299543 WNT7AO00755 349 aa15.27■□□□□ 0.03
CTDP1-202ENST00000299543 CCT6AP40227 531 aaKnown RBP15.27■□□□□ 0.03
CTDP1-202ENST00000299543 DDB1Q16531 1140 aa15.27■□□□□ 0.03
CTDP1-202ENST00000299543 CAVIN4Q5BKX8 364 aa15.27■□□□□ 0.03
CTDP1-202ENST00000299543 SYMPKQ92797 1274 aaKnown RBP15.27■□□□□ 0.03
CTDP1-202ENST00000299543 AATFQ9NY61 560 aaKnown RBP eCLIP15.27■□□□□ 0.03
CTDP1-202ENST00000299543 SRPRBQ9Y5M8 271 aaKnown RBP15.27■□□□□ 0.03
CTDP1-202ENST00000299543 ABCC6O95255 1503 aa15.26■□□□□ 0.03
CTDP1-202ENST00000299543 KRT2P35908 639 aa15.26■□□□□ 0.03
CTDP1-202ENST00000299543 MDM2Q00987 491 aaPredicted RBP15.26■□□□□ 0.03
CTDP1-202ENST00000299543 INTS5Q6P9B9 1019 aaKnown RBP15.26■□□□□ 0.03
CTDP1-202ENST00000299543 PPFIBP1Q86W92 1011 aa15.26■□□□□ 0.03
CTDP1-202ENST00000299543 GOLGA6L1Q8N7Z2 621 aa15.26■□□□□ 0.03
CTDP1-202ENST00000299543 WDR24Q96S15 920 aa15.26■□□□□ 0.03
CTDP1-202ENST00000299543 STRCP1A6NGW2 1772 aa15.26■□□□□ 0.03
CTDP1-202ENST00000299543 ARHGAP6O43182 974 aa15.26■□□□□ 0.03
CTDP1-202ENST00000299543 MCM7P33993 719 aa15.26■□□□□ 0.03
CTDP1-202ENST00000299543 REXO1L1PQ8IX06 675 aa15.26■□□□□ 0.03
CTDP1-202ENST00000299543 FAM212AQ96EL1 285 aa15.26■□□□□ 0.03
CTDP1-202ENST00000299543 ZSCAN10Q96SZ4 725 aaPredicted RBP15.26■□□□□ 0.03
CTDP1-202ENST00000299543 CDC5LQ99459 802 aaKnown RBP15.26■□□□□ 0.03
CTDP1-202ENST00000299543 STK36Q9NRP7 1315 aa15.26■□□□□ 0.03
CTDP1-202ENST00000299543 A0A087X0B3 334 aa15.25■□□□□ 0.03
CTDP1-202ENST00000299543 NLRP5P59047 1200 aa15.25■□□□□ 0.03
CTDP1-202ENST00000299543 BRMS1Q9HCU9 246 aa15.25■□□□□ 0.03
CTDP1-202ENST00000299543 MYH15Q9Y2K3 1946 aa15.25■□□□□ 0.03
CTDP1-202ENST00000299543 BCL9O00512 1426 aa15.25■□□□□ 0.03
CTDP1-202ENST00000299543 ITPK1Q13572 414 aa15.25■□□□□ 0.03
CTDP1-202ENST00000299543 ERFEQ4G0M1 354 aa15.25■□□□□ 0.03
CTDP1-202ENST00000299543 PIK3AP1Q6ZUJ8 805 aa15.25■□□□□ 0.03
CTDP1-202ENST00000299543 C3orf67Q6ZVT6 689 aa15.25■□□□□ 0.03
CTDP1-202ENST00000299543 SRLQ86TD4 932 aa15.25■□□□□ 0.03
CTDP1-202ENST00000299543 AKAP11Q9UKA4 1901 aa15.25■□□□□ 0.03
CTDP1-202ENST00000299543 DHX8Q14562 1220 aaKnown RBP15.25■□□□□ 0.03
CTDP1-202ENST00000299543 TRIM65Q6PJ69 517 aa15.25■□□□□ 0.03
CTDP1-202ENST00000299543 CCDC12Q8WUD4 166 aaPredicted RBP15.25■□□□□ 0.03
CTDP1-202ENST00000299543 PLIN2Q99541 437 aa15.25■□□□□ 0.03
CTDP1-202ENST00000299543 PLEKHG2Q9H7P9 1386 aa15.25■□□□□ 0.03
CTDP1-202ENST00000299543 SPEF2Q9C093 1822 aa15.24■□□□□ 0.03
CTDP1-202ENST00000299543 SOWAHDA6NJG2 315 aa15.24■□□□□ 0.03
CTDP1-202ENST00000299543 PTGDRQ13258 359 aa15.24■□□□□ 0.03
CTDP1-202ENST00000299543 DNAJC21Q5F1R6 531 aaKnown RBP15.24■□□□□ 0.03
CTDP1-202ENST00000299543 L2HGDHQ9H9P8 463 aa15.24■□□□□ 0.03
CTDP1-202ENST00000299543 KCNQ2O43526 872 aa15.24■□□□□ 0.03
CTDP1-202ENST00000299543 ACTN4O43707 911 aaKnown RBP15.24■□□□□ 0.03
CTDP1-202ENST00000299543 MORC3Q14149 939 aa15.24■□□□□ 0.03
CTDP1-202ENST00000299543 IGSF22Q8N9C0 903 aa15.24■□□□□ 0.03
CTDP1-202ENST00000299543 TC2NQ8N9U0 490 aa15.24■□□□□ 0.03
CTDP1-202ENST00000299543 CTCFLQ8NI51 663 aaPredicted RBP15.24■□□□□ 0.03
CTDP1-202ENST00000299543 ENOX1Q8TC92 643 aaKnown RBP15.24■□□□□ 0.03
CTDP1-202ENST00000299543 ARGLU1Q9NWB6 273 aaPredicted RBP15.24■□□□□ 0.03
CTDP1-202ENST00000299543 FANCGO15287 622 aa15.24■□□□□ 0.03
CTDP1-202ENST00000299543 CAMTA2O94983 1202 aa15.24■□□□□ 0.03
CTDP1-202ENST00000299543 CYP2D6P10635 497 aa15.24■□□□□ 0.03
CTDP1-202ENST00000299543 VEGFAP15692 232 aaPredicted RBP15.24■□□□□ 0.03
CTDP1-202ENST00000299543 KANK3Q6NY19 840 aa15.24■□□□□ 0.03
CTDP1-202ENST00000299543 SHISA4Q96DD7 197 aa15.24■□□□□ 0.03
CTDP1-202ENST00000299543 MED15Q96RN5 788 aa15.24■□□□□ 0.03
CTDP1-202ENST00000299543 JRKLQ9Y4A0 524 aa15.24■□□□□ 0.03
CTDP1-202ENST00000299543 PARP4Q9UKK3 1724 aaKnown RBP15.23■□□□□ 0.03
CTDP1-202ENST00000299543 CD44P16070 742 aaKnown RBP15.23■□□□□ 0.03
CTDP1-202ENST00000299543 IBSPP21815 317 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms