RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 FAM177A1Q8N128 213 aaPredicted RBP15.51■□□□□ 0.07
CDH8-201ENST00000299345 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.51■□□□□ 0.07
CDH8-201ENST00000299345 V9GYY5 206 aaPredicted RBP15.51■□□□□ 0.07
CDH8-201ENST00000299345 CNTNAP4Q9C0A0 1308 aa15.5■□□□□ 0.07
CDH8-201ENST00000299345 PSDA5PKW4 1024 aaPredicted RBP15.5■□□□□ 0.07
CDH8-201ENST00000299345 SCG2P13521 617 aa15.5■□□□□ 0.07
CDH8-201ENST00000299345 MCM7P33993 719 aa15.5■□□□□ 0.07
CDH8-201ENST00000299345 STX17P56962 302 aa15.5■□□□□ 0.07
CDH8-201ENST00000299345 FILIP1LQ4L180 1135 aa15.5■□□□□ 0.07
CDH8-201ENST00000299345 PHF20Q9BVI0 1012 aa15.5■□□□□ 0.07
CDH8-201ENST00000299345 SLIT2O94813 1529 aa15.5■□□□□ 0.07
CDH8-201ENST00000299345 DOT1LQ8TEK3 1739 aa15.5■□□□□ 0.07
CDH8-201ENST00000299345 ZSCAN12O43309 604 aa15.5■□□□□ 0.07
CDH8-201ENST00000299345 CBX1P83916 185 aa15.5■□□□□ 0.07
CDH8-201ENST00000299345 SYMPKQ92797 1274 aaKnown RBP15.5■□□□□ 0.07
CDH8-201ENST00000299345 PPP1R13BQ96KQ4 1090 aa15.5■□□□□ 0.07
CDH8-201ENST00000299345 STX8Q9UNK0 236 aa15.5■□□□□ 0.07
CDH8-201ENST00000299345 CTIFO43310 598 aaKnown RBP15.5■□□□□ 0.07
CDH8-201ENST00000299345 LDHCP07864 332 aa15.5■□□□□ 0.07
CDH8-201ENST00000299345 PTGDRQ13258 359 aa15.5■□□□□ 0.07
CDH8-201ENST00000299345 WDR66Q8TBY9 1149 aa15.5■□□□□ 0.07
CDH8-201ENST00000299345 ROBO1Q9Y6N7 1651 aa15.49■□□□□ 0.07
CDH8-201ENST00000299345 NID2Q14112 1375 aa15.49■□□□□ 0.07
CDH8-201ENST00000299345 ORC4O43929 436 aa15.49■□□□□ 0.07
CDH8-201ENST00000299345 USP17L8P0C7I0 530 aa15.49■□□□□ 0.07
CDH8-201ENST00000299345 CALML3P27482 149 aa15.49■□□□□ 0.07
CDH8-201ENST00000299345 PKN1Q16512 942 aa15.49■□□□□ 0.07
CDH8-201ENST00000299345 NYAP1Q6ZVC0 841 aa15.49■□□□□ 0.07
CDH8-201ENST00000299345 VSTM4Q8IW00 320 aa15.49■□□□□ 0.07
CDH8-201ENST00000299345 ENOX1Q8TC92 643 aaKnown RBP15.49■□□□□ 0.07
CDH8-201ENST00000299345 TMEM232C9JQI7 657 aa15.49■□□□□ 0.07
CDH8-201ENST00000299345 SLU7O95391 586 aaKnown RBP15.49■□□□□ 0.07
CDH8-201ENST00000299345 TSPY3P0CV98 308 aa15.49■□□□□ 0.07
CDH8-201ENST00000299345 TSPY8P0CW00 308 aa15.49■□□□□ 0.07
CDH8-201ENST00000299345 GSTO1P78417 241 aa15.49■□□□□ 0.07
CDH8-201ENST00000299345 TRAPPC3LQ5T215 181 aa15.49■□□□□ 0.07
CDH8-201ENST00000299345 E4F1Q66K89 784 aaPredicted RBP15.49■□□□□ 0.07
CDH8-201ENST00000299345 PPFIBP1Q86W92 1011 aa15.49■□□□□ 0.07
CDH8-201ENST00000299345 ELOA2Q8IYF1 753 aaPredicted RBP15.49■□□□□ 0.07
CDH8-201ENST00000299345 CGNQ9P2M7 1197 aaKnown RBP15.49■□□□□ 0.07
CDH8-201ENST00000299345 DNAI1Q9UI46 699 aa15.49■□□□□ 0.07
CDH8-201ENST00000299345 ZNF215Q9UL58 517 aaPredicted RBP15.49■□□□□ 0.07
CDH8-201ENST00000299345 MYO5AQ9Y4I1 1855 aaKnown RBP15.49■□□□□ 0.07
CDH8-201ENST00000299345 CCDC194A0A1B0GVG4 234 aa15.48■□□□□ 0.07
CDH8-201ENST00000299345 IQUBQ8NA54 791 aa15.48■□□□□ 0.07
CDH8-201ENST00000299345 STAMQ92783 540 aa15.48■□□□□ 0.07
CDH8-201ENST00000299345 RPGRQ92834 1020 aaKnown RBP15.48■□□□□ 0.07
CDH8-201ENST00000299345 TPM1P09493 284 aa15.48■□□□□ 0.07
CDH8-201ENST00000299345 SLFN14P0C7P3 912 aa15.48■□□□□ 0.07
CDH8-201ENST00000299345 GOLGA8FQ08AF8 430 aa15.48■□□□□ 0.07
CDH8-201ENST00000299345 NCBP1Q09161 790 aaKnown RBP15.48■□□□□ 0.07
CDH8-201ENST00000299345 GOLGA8DPQ0D2H9 430 aa15.48■□□□□ 0.07
CDH8-201ENST00000299345 SRBD1Q8N5C6 995 aaKnown RBP15.48■□□□□ 0.07
CDH8-201ENST00000299345 ANKRD20A12PQ8NF67 263 aa15.48■□□□□ 0.07
CDH8-201ENST00000299345 SPDYE4A6NLX3 237 aa15.48■□□□□ 0.07
CDH8-201ENST00000299345 TUBB4AP04350 444 aa15.48■□□□□ 0.07
CDH8-201ENST00000299345 RC3H1Q5TC82 1133 aaKnown RBP15.48■□□□□ 0.07
CDH8-201ENST00000299345 CNBD1Q8NA66 436 aa15.48■□□□□ 0.07
CDH8-201ENST00000299345 MNS1Q8NEH6 495 aa15.48■□□□□ 0.07
CDH8-201ENST00000299345 GNAQP50148 359 aa15.47■□□□□ 0.07
CDH8-201ENST00000299345 PLCD1P51178 756 aa15.47■□□□□ 0.07
CDH8-201ENST00000299345 ZNF804AQ7Z570 1209 aa15.47■□□□□ 0.07
CDH8-201ENST00000299345 ARHGEF1Q92888 912 aaKnown RBP15.47■□□□□ 0.07
CDH8-201ENST00000299345 MORC3Q14149 939 aa15.47■□□□□ 0.07
CDH8-201ENST00000299345 SPECC1LQ69YQ0 1117 aa15.47■□□□□ 0.07
CDH8-201ENST00000299345 PTF1AQ7RTS3 328 aa15.47■□□□□ 0.07
CDH8-201ENST00000299345 PNMA1Q8ND90 353 aa15.47■□□□□ 0.07
CDH8-201ENST00000299345 BAG1Q99933 345 aaPredicted RBP15.47■□□□□ 0.07
CDH8-201ENST00000299345 ACTN4O43707 911 aaKnown RBP15.47■□□□□ 0.07
CDH8-201ENST00000299345 MDM2Q00987 491 aaPredicted RBP15.47■□□□□ 0.07
CDH8-201ENST00000299345 NAA30Q147X3 362 aaPredicted RBP15.47■□□□□ 0.07
CDH8-201ENST00000299345 ZNF384Q8TF68 577 aa15.47■□□□□ 0.07
CDH8-201ENST00000299345 ERO1AQ96HE7 468 aa15.47■□□□□ 0.07
CDH8-201ENST00000299345 PYM1Q9BRP8 204 aaKnown RBP15.47■□□□□ 0.07
CDH8-201ENST00000299345 ZNF287Q9HBT7 754 aa15.47■□□□□ 0.07
CDH8-201ENST00000299345 SAMSN1Q9NSI8 373 aaKnown RBP15.47■□□□□ 0.07
CDH8-201ENST00000299345 LRP5O75197 1615 aa15.47■□□□□ 0.07
CDH8-201ENST00000299345 MYH15Q9Y2K3 1946 aa15.47■□□□□ 0.07
CDH8-201ENST00000299345 BMP6P22004 513 aa15.46■□□□□ 0.07
CDH8-201ENST00000299345 ERCC5P28715 1186 aaPredicted RBP15.46■□□□□ 0.07
CDH8-201ENST00000299345 FMR1Q06787 632 aaKnown RBP eCLIP15.46■□□□□ 0.07
CDH8-201ENST00000299345 EARS2Q5JPH6 523 aaKnown RBP15.46■□□□□ 0.07
CDH8-201ENST00000299345 TXNRD3Q86VQ6 643 aa15.46■□□□□ 0.07
CDH8-201ENST00000299345 CPLX3Q8WVH0 158 aa15.46■□□□□ 0.07
CDH8-201ENST00000299345 ARHGAP6O43182 974 aa15.46■□□□□ 0.07
CDH8-201ENST00000299345 URI1O94763 535 aaPredicted RBP15.46■□□□□ 0.07
CDH8-201ENST00000299345 TGFBRAP1Q8WUH2 860 aa15.46■□□□□ 0.07
CDH8-201ENST00000299345 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.46■□□□□ 0.07
CDH8-201ENST00000299345 UBAP1LF5GYI3 381 aa15.46■□□□□ 0.07
CDH8-201ENST00000299345 CASP1P29466 404 aa15.46■□□□□ 0.07
CDH8-201ENST00000299345 SYCP1Q15431 976 aa15.46■□□□□ 0.07
CDH8-201ENST00000299345 CCDC178Q5BJE1 867 aa15.46■□□□□ 0.07
CDH8-201ENST00000299345 HEATR3Q7Z4Q2 680 aa15.46■□□□□ 0.07
CDH8-201ENST00000299345 PAGE5Q96GU1 130 aa15.46■□□□□ 0.07
CDH8-201ENST00000299345 EVX2Q03828 476 aa15.45■□□□□ 0.06
CDH8-201ENST00000299345 FUT2Q10981 343 aa15.45■□□□□ 0.06
CDH8-201ENST00000299345 DIXDC1Q155Q3 683 aa15.45■□□□□ 0.06
CDH8-201ENST00000299345 RRAGBQ5VZM2 374 aa15.45■□□□□ 0.06
CDH8-201ENST00000299345 DYNLL2Q96FJ2 89 aa15.45■□□□□ 0.06
CDH8-201ENST00000299345 SAP30BPQ9UHR5 308 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms