RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 MTERF4Q7Z6M4 381 aaKnown RBP15.48■□□□□ 0.07
TTC39B-201ENST00000297615 KRI1Q8N9T8 703 aaKnown RBP15.48■□□□□ 0.07
TTC39B-201ENST00000297615 GJA10Q969M2 543 aa15.48■□□□□ 0.07
TTC39B-201ENST00000297615 CDCA7Q9BWT1 371 aaPredicted RBP15.48■□□□□ 0.07
TTC39B-201ENST00000297615 CRNKL1Q9BZJ0 848 aaKnown RBP15.48■□□□□ 0.07
TTC39B-201ENST00000297615 RNF41Q9H4P4 317 aaPredicted RBP15.48■□□□□ 0.07
TTC39B-201ENST00000297615 FRMPD2Q68DX3 1309 aaPredicted RBP15.48■□□□□ 0.07
TTC39B-201ENST00000297615 CCAR2Q8N163 923 aaKnown RBP15.47■□□□□ 0.07
TTC39B-201ENST00000297615 PKNOX2Q96KN3 472 aa15.47■□□□□ 0.07
TTC39B-201ENST00000297615 MAP3K14Q99558 947 aa15.47■□□□□ 0.07
TTC39B-201ENST00000297615 TSPY3P0CV98 308 aa15.47■□□□□ 0.07
TTC39B-201ENST00000297615 TSPY8P0CW00 308 aa15.47■□□□□ 0.07
TTC39B-201ENST00000297615 ATL3Q6DD88 541 aa15.47■□□□□ 0.07
TTC39B-201ENST00000297615 FMR1Q06787 632 aaKnown RBP eCLIP15.47■□□□□ 0.07
TTC39B-201ENST00000297615 SARM1Q6SZW1 724 aa15.47■□□□□ 0.07
TTC39B-201ENST00000297615 JMYQ8N9B5 988 aa15.47■□□□□ 0.07
TTC39B-201ENST00000297615 LRRN4CLQ8ND94 238 aa15.47■□□□□ 0.07
TTC39B-201ENST00000297615 AKAP11Q9UKA4 1901 aa15.46■□□□□ 0.07
TTC39B-201ENST00000297615 LIFRP42702 1097 aa15.46■□□□□ 0.07
TTC39B-201ENST00000297615 PTGDRQ13258 359 aa15.46■□□□□ 0.07
TTC39B-201ENST00000297615 SF3B3Q15393 1217 aaKnown RBP15.46■□□□□ 0.07
TTC39B-201ENST00000297615 SHROOM1Q2M3G4 852 aaPredicted RBP15.46■□□□□ 0.07
TTC39B-201ENST00000297615 SGMS1Q86VZ5 419 aa15.46■□□□□ 0.07
TTC39B-201ENST00000297615 ZNF622Q969S3 477 aaKnown RBP eCLIP15.46■□□□□ 0.07
TTC39B-201ENST00000297615 DNAI1Q9UI46 699 aa15.46■□□□□ 0.07
TTC39B-201ENST00000297615 NWD2Q9ULI1 1742 aa15.46■□□□□ 0.07
TTC39B-201ENST00000297615 AFF2P51816 1311 aa15.46■□□□□ 0.07
TTC39B-201ENST00000297615 DEXIO95424 95 aa15.46■□□□□ 0.07
TTC39B-201ENST00000297615 RBM5P52756 815 aaKnown RBP eCLIP15.46■□□□□ 0.07
TTC39B-201ENST00000297615 PKN1Q16512 942 aa15.46■□□□□ 0.07
TTC39B-201ENST00000297615 MFSD14BQ5SR56 506 aa15.46■□□□□ 0.07
TTC39B-201ENST00000297615 ZNF444Q8N0Y2 327 aaPredicted RBP15.46■□□□□ 0.07
TTC39B-201ENST00000297615 KAT14Q9H8E8 782 aa15.46■□□□□ 0.07
TTC39B-201ENST00000297615 QTRT2Q9H974 415 aaKnown RBP15.46■□□□□ 0.07
TTC39B-201ENST00000297615 THRAP3Q9Y2W1 955 aaKnown RBP15.46■□□□□ 0.07
TTC39B-201ENST00000297615 SERPINB2P05120 415 aa15.45■□□□□ 0.06
TTC39B-201ENST00000297615 GNAT2P19087 354 aa15.45■□□□□ 0.06
TTC39B-201ENST00000297615 TM4SF1P30408 202 aa15.45■□□□□ 0.06
TTC39B-201ENST00000297615 GTF2F1P35269 517 aaKnown RBP eCLIP15.45■□□□□ 0.063e-6■■□□□ 12.8
TTC39B-201ENST00000297615 SYMPKQ92797 1274 aaKnown RBP15.45■□□□□ 0.06
TTC39B-201ENST00000297615 BAZ2AQ9UIF9 1905 aaKnown RBP15.45■□□□□ 0.06
TTC39B-201ENST00000297615 MPHOSPH10O00566 681 aaKnown RBP15.45■□□□□ 0.06
TTC39B-201ENST00000297615 SEC23AQ15436 765 aa15.45■□□□□ 0.06
TTC39B-201ENST00000297615 E4F1Q66K89 784 aaPredicted RBP15.45■□□□□ 0.06
TTC39B-201ENST00000297615 PRR5LQ6MZQ0 368 aa15.45■□□□□ 0.06
TTC39B-201ENST00000297615 FBXO33Q7Z6M2 555 aa15.45■□□□□ 0.06
TTC39B-201ENST00000297615 LRRC47Q8N1G4 583 aaKnown RBP15.45■□□□□ 0.06
TTC39B-201ENST00000297615 KIF18AQ8NI77 898 aa15.45■□□□□ 0.06
TTC39B-201ENST00000297615 ZNF512BQ96KM6 892 aaPredicted RBP15.45■□□□□ 0.06
TTC39B-201ENST00000297615 NUP188Q5SRE5 1749 aa15.45■□□□□ 0.06
TTC39B-201ENST00000297615 SHANK3Q9BYB0 1731 aa15.45■□□□□ 0.06
TTC39B-201ENST00000297615 TRIM75PA6NK02 468 aa15.45■□□□□ 0.06
TTC39B-201ENST00000297615 TAL1P17542 331 aaPredicted RBP15.45■□□□□ 0.06
TTC39B-201ENST00000297615 CCT6AP40227 531 aaKnown RBP15.45■□□□□ 0.06
TTC39B-201ENST00000297615 SNAP25P60880 206 aa15.45■□□□□ 0.06
TTC39B-201ENST00000297615 NCAPHQ15003 741 aa15.45■□□□□ 0.06
TTC39B-201ENST00000297615 CLEC4GQ6UXB4 293 aa15.45■□□□□ 0.06
TTC39B-201ENST00000297615 KRBA2Q6ZNG9 492 aa15.45■□□□□ 0.06
TTC39B-201ENST00000297615 TROAPQ12815 778 aa15.44■□□□□ 0.06
TTC39B-201ENST00000297615 TYW1BQ6NUM6 668 aa15.44■□□□□ 0.06
TTC39B-201ENST00000297615 DESI2Q9BSY9 194 aa15.44■□□□□ 0.06
TTC39B-201ENST00000297615 ZSWIM4Q9H7M6 989 aa15.44■□□□□ 0.06
TTC39B-201ENST00000297615 NFE2L3Q9Y4A8 694 aa15.44■□□□□ 0.06
TTC39B-201ENST00000297615 TOP1P11387 765 aaKnown RBP15.44■□□□□ 0.06
TTC39B-201ENST00000297615 BTDP43251 543 aa15.44■□□□□ 0.06
TTC39B-201ENST00000297615 INF2Q27J81 1249 aa15.44■□□□□ 0.06
TTC39B-201ENST00000297615 PNMA1Q8ND90 353 aa15.44■□□□□ 0.06
TTC39B-201ENST00000297615 GJD4Q96KN9 370 aaPredicted RBP15.44■□□□□ 0.06
TTC39B-201ENST00000297615 GPCPD1Q9NPB8 672 aa15.44■□□□□ 0.06
TTC39B-201ENST00000297615 MYH2Q9UKX2 1941 aa15.44■□□□□ 0.06
TTC39B-201ENST00000297615 NRDCO43847 1150 aa15.43■□□□□ 0.06
TTC39B-201ENST00000297615 MYL5Q02045 173 aa15.43■□□□□ 0.06
TTC39B-201ENST00000297615 ALX1Q15699 326 aa15.43■□□□□ 0.06
TTC39B-201ENST00000297615 ERCC6LQ2NKX8 1250 aa15.43■□□□□ 0.06
TTC39B-201ENST00000297615 TEX11Q8IYF3 940 aa15.43■□□□□ 0.06
TTC39B-201ENST00000297615 EPC1Q9H2F5 836 aa15.43■□□□□ 0.06
TTC39B-201ENST00000297615 DBNDD1Q9H9R9 158 aa15.43■□□□□ 0.06
TTC39B-201ENST00000297615 POLD4Q9HCU8 107 aa15.43■□□□□ 0.06
TTC39B-201ENST00000297615 IL17RBQ9NRM6 502 aa15.43■□□□□ 0.06
TTC39B-201ENST00000297615 PAXBP1Q9Y5B6 917 aa15.43■□□□□ 0.06
TTC39B-201ENST00000297615 CCDC196A0A1B0GTZ2 297 aa15.43■□□□□ 0.06
TTC39B-201ENST00000297615 URI1O94763 535 aaPredicted RBP15.43■□□□□ 0.06
TTC39B-201ENST00000297615 CDC25BP30305 580 aa15.43■□□□□ 0.06
TTC39B-201ENST00000297615 KARSQ15046 597 aaKnown RBP15.43■□□□□ 0.06
TTC39B-201ENST00000297615 JAKMIP3Q5VZ66 844 aa15.43■□□□□ 0.06
TTC39B-201ENST00000297615 PPP1R13BQ96KQ4 1090 aa15.43■□□□□ 0.06
TTC39B-201ENST00000297615 KRT2P35908 639 aa15.42■□□□□ 0.06
TTC39B-201ENST00000297615 SLC16A2P36021 539 aa15.42■□□□□ 0.06
TTC39B-201ENST00000297615 POSTNQ15063 836 aa15.42■□□□□ 0.06
TTC39B-201ENST00000297615 BARGINQ6ZT62 677 aa15.42■□□□□ 0.06
TTC39B-201ENST00000297615 ZFP91Q96JP5 570 aaPredicted RBP15.42■□□□□ 0.06
TTC39B-201ENST00000297615 NOL10Q9BSC4 688 aaKnown RBP15.42■□□□□ 0.06
TTC39B-201ENST00000297615 NYXQ9GZU5 481 aa15.42■□□□□ 0.06
TTC39B-201ENST00000297615 POLLQ9UGP5 575 aa15.42■□□□□ 0.06
TTC39B-201ENST00000297615 DOT1LQ8TEK3 1739 aa15.42■□□□□ 0.06
TTC39B-201ENST00000297615 TRMT1LQ7Z2T5 733 aaKnown RBP15.42■□□□□ 0.06
TTC39B-201ENST00000297615 SMARCE1Q969G3 411 aa15.42■□□□□ 0.06
TTC39B-201ENST00000297615 FBXO2Q9UK22 296 aaPredicted RBP15.42■□□□□ 0.06
TTC39B-201ENST00000297615 MAN1B1Q9UKM7 699 aa15.42■□□□□ 0.06
TTC39B-201ENST00000297615 GSDMDP57764 484 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms