RNA–Protein interactions for RNA: ENST00000296783.7

PAPD4-201, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PAPD4, Length 3,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-201ENST00000296783 ATP1A3P13637 1013 aa12.04□□□□□ -0.48
PAPD4-201ENST00000296783 RBM10P98175 930 aaKnown RBP12.04□□□□□ -0.48
PAPD4-201ENST00000296783 NT5DC1Q5TFE4 455 aa12.04□□□□□ -0.48
PAPD4-201ENST00000296783 CNBD1Q8NA66 436 aa12.04□□□□□ -0.48
PAPD4-201ENST00000296783 CSRNP2Q9H175 543 aa12.04□□□□□ -0.48
PAPD4-201ENST00000296783 MCM9Q9NXL9 1143 aa12.04□□□□□ -0.48
PAPD4-201ENST00000296783 CEP131Q9UPN4 1083 aa12.04□□□□□ -0.48
PAPD4-201ENST00000296783 NPHP1O15259 732 aa12.03□□□□□ -0.48
PAPD4-201ENST00000296783 ATP2B1P20020 1258 aa12.03□□□□□ -0.48
PAPD4-201ENST00000296783 LMOD1P29536 600 aaPredicted RBP12.03□□□□□ -0.48
PAPD4-201ENST00000296783 NOM1Q5C9Z4 860 aaKnown RBP12.03□□□□□ -0.48
PAPD4-201ENST00000296783 SPTY2D1Q68D10 685 aaPredicted RBP12.03□□□□□ -0.48
PAPD4-201ENST00000296783 PRR5LQ6MZQ0 368 aa12.03□□□□□ -0.48
PAPD4-201ENST00000296783 FAM13BQ9NYF5 915 aa12.03□□□□□ -0.48
PAPD4-201ENST00000296783 IMPACTQ9P2X3 320 aa12.03□□□□□ -0.48
PAPD4-201ENST00000296783 XDHP47989 1333 aa12.03□□□□□ -0.48
PAPD4-201ENST00000296783 ONECUT3O60422 494 aaPredicted RBP12.03□□□□□ -0.48
PAPD4-201ENST00000296783 SKILP12757 684 aa12.03□□□□□ -0.48
PAPD4-201ENST00000296783 SARSP49591 514 aaKnown RBP12.03□□□□□ -0.48
PAPD4-201ENST00000296783 PDE4BQ07343 736 aa12.03□□□□□ -0.48
PAPD4-201ENST00000296783 HSP90AA2PQ14568 343 aaPredicted RBP12.03□□□□□ -0.48
PAPD4-201ENST00000296783 C12orf60Q5U649 245 aa12.03□□□□□ -0.48
PAPD4-201ENST00000296783 WDR66Q8TBY9 1149 aa12.03□□□□□ -0.48
PAPD4-201ENST00000296783 C16orf45Q96MC5 204 aaPredicted RBP12.03□□□□□ -0.48
PAPD4-201ENST00000296783 SERTAD1Q9UHV2 236 aa12.03□□□□□ -0.48
PAPD4-201ENST00000296783 ACTN4O43707 911 aaKnown RBP12.02□□□□□ -0.48
PAPD4-201ENST00000296783 SMC2O95347 1197 aa12.02□□□□□ -0.48
PAPD4-201ENST00000296783 LDHBP07195 334 aaKnown RBP12.02□□□□□ -0.48
PAPD4-201ENST00000296783 PRR29P0C7W0 189 aa12.02□□□□□ -0.48
PAPD4-201ENST00000296783 MYL5Q02045 173 aa12.02□□□□□ -0.48
PAPD4-201ENST00000296783 POSTNQ15063 836 aa12.02□□□□□ -0.48
PAPD4-201ENST00000296783 SLC4A8Q2Y0W8 1093 aa12.02□□□□□ -0.48
PAPD4-201ENST00000296783 GPR101Q96P66 508 aaPredicted RBP12.02□□□□□ -0.48
PAPD4-201ENST00000296783 IL17RBQ9NRM6 502 aa12.02□□□□□ -0.48
PAPD4-201ENST00000296783 TRIM75PA6NK02 468 aa12.02□□□□□ -0.49
PAPD4-201ENST00000296783 TSPY2A6NKD2 308 aa12.02□□□□□ -0.49
PAPD4-201ENST00000296783 USP27XA6NNY8 438 aa12.02□□□□□ -0.49
PAPD4-201ENST00000296783 IGSF3O75054 1194 aa12.02□□□□□ -0.49
PAPD4-201ENST00000296783 VEGFAP15692 232 aaPredicted RBP12.02□□□□□ -0.49
PAPD4-201ENST00000296783 GSDMDP57764 484 aa12.02□□□□□ -0.49
PAPD4-201ENST00000296783 TPM4P67936 248 aa12.02□□□□□ -0.49
PAPD4-201ENST00000296783 FANCCQ00597 558 aa12.02□□□□□ -0.49
PAPD4-201ENST00000296783 DIXDC1Q155Q3 683 aa12.02□□□□□ -0.49
PAPD4-201ENST00000296783 C15orf52Q6ZUT6 534 aaKnown RBP12.02□□□□□ -0.49
PAPD4-201ENST00000296783 CTCFLQ8NI51 663 aaPredicted RBP12.02□□□□□ -0.49
PAPD4-201ENST00000296783 SH3RF3Q8TEJ3 882 aaPredicted RBP12.02□□□□□ -0.49
PAPD4-201ENST00000296783 MAN1B1Q9UKM7 699 aa12.02□□□□□ -0.49
PAPD4-201ENST00000296783 ROBO3Q96MS0 1386 aa12.02□□□□□ -0.49
PAPD4-201ENST00000296783 CDK5RAP2Q96SN8 1893 aa12.02□□□□□ -0.49
PAPD4-201ENST00000296783 NAV1Q8NEY1 1877 aa12.02□□□□□ -0.49
PAPD4-201ENST00000296783 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.02□□□□□ -0.49
PAPD4-201ENST00000296783 CRY2Q49AN0 593 aa12.02□□□□□ -0.49
PAPD4-201ENST00000296783 CERKQ8TCT0 537 aa12.02□□□□□ -0.49
PAPD4-201ENST00000296783 TSC1Q92574 1164 aa12.02□□□□□ -0.49
PAPD4-201ENST00000296783 A0A087X0B3 334 aa12.01□□□□□ -0.49
PAPD4-201ENST00000296783 RIOK3O14730 519 aaKnown RBP12.01□□□□□ -0.49
PAPD4-201ENST00000296783 ADAMTS3O15072 1205 aa12.01□□□□□ -0.49
PAPD4-201ENST00000296783 ADRA2BP18089 450 aa12.01□□□□□ -0.49
PAPD4-201ENST00000296783 ARMCX5Q6P1M9 558 aa12.01□□□□□ -0.49
PAPD4-201ENST00000296783 GRAMD1CQ8IYS0 662 aa12.01□□□□□ -0.49
PAPD4-201ENST00000296783 SPATA20Q8TB22 786 aa12.01□□□□□ -0.49
PAPD4-201ENST00000296783 PPP4CP60510 307 aa12.01□□□□□ -0.49
PAPD4-201ENST00000296783 GPSM2P81274 684 aa12.01□□□□□ -0.49
PAPD4-201ENST00000296783 PFKFB3Q16875 520 aaPredicted RBP12.01□□□□□ -0.49
PAPD4-201ENST00000296783 TMC6Q7Z403 805 aa12.01□□□□□ -0.49
PAPD4-201ENST00000296783 PDILTQ8N807 584 aa12.01□□□□□ -0.49
PAPD4-201ENST00000296783 DPF2Q92785 391 aa12.01□□□□□ -0.49
PAPD4-201ENST00000296783 DYNLL2Q96FJ2 89 aa12.01□□□□□ -0.49
PAPD4-201ENST00000296783 SCG2P13521 617 aa12□□□□□ -0.49
PAPD4-201ENST00000296783 GYS1P13807 737 aa12□□□□□ -0.49
PAPD4-201ENST00000296783 TFAP4Q01664 338 aa12□□□□□ -0.49
PAPD4-201ENST00000296783 EPSTI1Q96J88 318 aa12□□□□□ -0.49
PAPD4-201ENST00000296783 BCL11BQ9C0K0 894 aaPredicted RBP12□□□□□ -0.49
PAPD4-201ENST00000296783 KCND1Q9NSA2 647 aa12□□□□□ -0.49
PAPD4-201ENST00000296783 HOOK1Q9UJC3 728 aaKnown RBP12□□□□□ -0.49
PAPD4-201ENST00000296783 TNNT1P13805 278 aa12□□□□□ -0.49
PAPD4-201ENST00000296783 USP5P45974 858 aa12□□□□□ -0.49
PAPD4-201ENST00000296783 MORC3Q14149 939 aa12□□□□□ -0.49
PAPD4-201ENST00000296783 OLFM4Q6UX06 510 aa12□□□□□ -0.49
PAPD4-201ENST00000296783 ZNF804AQ7Z570 1209 aa12□□□□□ -0.49
PAPD4-201ENST00000296783 DGKHQ86XP1 1220 aa12□□□□□ -0.49
PAPD4-201ENST00000296783 ANKS1AQ92625 1134 aa12□□□□□ -0.49
PAPD4-201ENST00000296783 FANCLQ9NW38 375 aa12□□□□□ -0.49
PAPD4-201ENST00000296783 DDX60LQ5H9U9 1706 aaKnown RBP12□□□□□ -0.49
PAPD4-201ENST00000296783 TPD52L1Q16890 204 aaPredicted RBP12□□□□□ -0.49
PAPD4-201ENST00000296783 NYAP1Q6ZVC0 841 aa12□□□□□ -0.49
PAPD4-201ENST00000296783 RTFDC1Q9BY42 306 aaPredicted RBP12□□□□□ -0.49
PAPD4-201ENST00000296783 BRMS1Q9HCU9 246 aa12□□□□□ -0.49
PAPD4-201ENST00000296783 NT5C2P49902 561 aa11.99□□□□□ -0.49
PAPD4-201ENST00000296783 FMR1Q06787 632 aaKnown RBP eCLIP11.99□□□□□ -0.49
PAPD4-201ENST00000296783 SEPT12Q8IYM1 358 aa11.99□□□□□ -0.49
PAPD4-201ENST00000296783 ZNF710Q8N1W2 664 aa11.99□□□□□ -0.49
PAPD4-201ENST00000296783 NOL10Q9BSC4 688 aaKnown RBP11.99□□□□□ -0.49
PAPD4-201ENST00000296783 PDCL3Q9H2J4 239 aa11.99□□□□□ -0.49
PAPD4-201ENST00000296783 CD209Q9NNX6 404 aa11.99□□□□□ -0.49
PAPD4-201ENST00000296783 AFF2P51816 1311 aa11.99□□□□□ -0.49
PAPD4-201ENST00000296783 PLCD1P51178 756 aa11.99□□□□□ -0.49
PAPD4-201ENST00000296783 UBASH3AP57075 661 aa11.99□□□□□ -0.49
PAPD4-201ENST00000296783 GSTO1P78417 241 aa11.99□□□□□ -0.49
PAPD4-201ENST00000296783 ATP2C1P98194 919 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms