RNA–Protein interactions for RNA: ENST00000296343.9

RUBCN-202, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUBCN, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-202ENST00000296343 U2AF2P26368 475 aaKnown RBP eCLIP15.17■□□□□ 0.02
RUBCN-202ENST00000296343 TCP10Q12799 353 aa15.17■□□□□ 0.02
RUBCN-202ENST00000296343 RBM43Q6ZSC3 357 aaKnown RBP15.17■□□□□ 0.02
RUBCN-202ENST00000296343 TBC1D16Q8TBP0 767 aa15.17■□□□□ 0.02
RUBCN-202ENST00000296343 UBA5Q9GZZ9 404 aa15.17■□□□□ 0.02
RUBCN-202ENST00000296343 SERTAD1Q9UHV2 236 aa15.17■□□□□ 0.02
RUBCN-202ENST00000296343 WNK3Q9BYP7 1800 aa15.17■□□□□ 0.02
RUBCN-202ENST00000296343 OFD1O75665 1012 aa15.16■□□□□ 0.02
RUBCN-202ENST00000296343 MMP10P09238 476 aa15.16■□□□□ 0.02
RUBCN-202ENST00000296343 CMA1P23946 247 aa15.16■□□□□ 0.02
RUBCN-202ENST00000296343 USP17L2Q6R6M4 530 aa15.16■□□□□ 0.02
RUBCN-202ENST00000296343 HEATR3Q7Z4Q2 680 aa15.16■□□□□ 0.02
RUBCN-202ENST00000296343 KRI1Q8N9T8 703 aaKnown RBP15.16■□□□□ 0.02
RUBCN-202ENST00000296343 PNMA1Q8ND90 353 aa15.16■□□□□ 0.02
RUBCN-202ENST00000296343 CACTINQ8WUQ7 758 aaKnown RBP15.16■□□□□ 0.02
RUBCN-202ENST00000296343 IFNKQ9P0W0 207 aa15.16■□□□□ 0.02
RUBCN-202ENST00000296343 PCDHA5Q9Y5H7 936 aa15.16■□□□□ 0.02
RUBCN-202ENST00000296343 RBM5P52756 815 aaKnown RBP eCLIP15.16■□□□□ 0.02
RUBCN-202ENST00000296343 ILDR2Q71H61 639 aa15.16■□□□□ 0.02
RUBCN-202ENST00000296343 COL23A1Q86Y22 540 aaPredicted RBP15.16■□□□□ 0.02
RUBCN-202ENST00000296343 WASF1Q92558 559 aa15.16■□□□□ 0.02
RUBCN-202ENST00000296343 HS1BP3Q53T59 392 aa15.16■□□□□ 0.02
RUBCN-202ENST00000296343 TDRD7Q8NHU6 1098 aaKnown RBP15.16■□□□□ 0.02
RUBCN-202ENST00000296343 WDR66Q8TBY9 1149 aa15.16■□□□□ 0.02
RUBCN-202ENST00000296343 EEF2KMTQ96G04 330 aa15.16■□□□□ 0.02
RUBCN-202ENST00000296343 RBM17Q96I25 401 aaKnown RBP15.16■□□□□ 0.02
RUBCN-202ENST00000296343 BAG3O95817 575 aa15.15■□□□□ 0.02
RUBCN-202ENST00000296343 STX17P56962 302 aa15.15■□□□□ 0.02
RUBCN-202ENST00000296343 METTL16Q86W50 562 aaKnown RBP15.15■□□□□ 0.02
RUBCN-202ENST00000296343 JMYQ8N9B5 988 aa15.15■□□□□ 0.02
RUBCN-202ENST00000296343 FRMPD2Q68DX3 1309 aaPredicted RBP15.15■□□□□ 0.02
RUBCN-202ENST00000296343 A0A1W2PQ27 194 aa15.15■□□□□ 0.02
RUBCN-202ENST00000296343 A0A1W2PQ64 194 aa15.15■□□□□ 0.02
RUBCN-202ENST00000296343 A0A1W2PQD8 194 aa15.15■□□□□ 0.02
RUBCN-202ENST00000296343 CTAGE5O15320 804 aa15.15■□□□□ 0.02
RUBCN-202ENST00000296343 RCSD1Q6JBY9 416 aa15.15■□□□□ 0.02
RUBCN-202ENST00000296343 KIAA0825Q8IV33 1275 aa15.15■□□□□ 0.02
RUBCN-202ENST00000296343 ATP8A2Q9NTI2 1148 aa15.15■□□□□ 0.02
RUBCN-202ENST00000296343 MAPK8IP1Q9UQF2 711 aa15.15■□□□□ 0.02
RUBCN-202ENST00000296343 UQCRHLA0A096LP55 91 aa15.14■□□□□ 0.01
RUBCN-202ENST00000296343 POLRMTO00411 1230 aaKnown RBP15.14■□□□□ 0.01
RUBCN-202ENST00000296343 ZNF500O60304 480 aaPredicted RBP15.14■□□□□ 0.01
RUBCN-202ENST00000296343 UQCRHP07919 91 aa15.14■□□□□ 0.01
RUBCN-202ENST00000296343 ATL3Q6DD88 541 aa15.14■□□□□ 0.01
RUBCN-202ENST00000296343 SAMD1Q6SPF0 538 aaPredicted RBP15.14■□□□□ 0.01
RUBCN-202ENST00000296343 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.14■□□□□ 0.01
RUBCN-202ENST00000296343 LRRC47Q8N1G4 583 aaKnown RBP15.14■□□□□ 0.01
RUBCN-202ENST00000296343 PDGFDQ9GZP0 370 aaPredicted RBP15.14■□□□□ 0.01
RUBCN-202ENST00000296343 BLZF1Q9H2G9 400 aa15.14■□□□□ 0.01
RUBCN-202ENST00000296343 LRP5O75197 1615 aa15.14■□□□□ 0.01
RUBCN-202ENST00000296343 GOLGA6L6A8MZA4 724 aa15.14■□□□□ 0.01
RUBCN-202ENST00000296343 XBP1P17861 261 aa15.14■□□□□ 0.01
RUBCN-202ENST00000296343 KRT2P35908 639 aa15.14■□□□□ 0.01
RUBCN-202ENST00000296343 SHROOM1Q2M3G4 852 aaPredicted RBP15.14■□□□□ 0.01
RUBCN-202ENST00000296343 C12orf60Q5U649 245 aa15.14■□□□□ 0.01
RUBCN-202ENST00000296343 SPTY2D1Q68D10 685 aaPredicted RBP15.14■□□□□ 0.01
RUBCN-202ENST00000296343 TYW1BQ6NUM6 668 aa15.14■□□□□ 0.01
RUBCN-202ENST00000296343 RASSF8Q8NHQ8 419 aa15.14■□□□□ 0.01
RUBCN-202ENST00000296343 ZC3H12CQ9C0D7 883 aaKnown RBP15.14■□□□□ 0.01
RUBCN-202ENST00000296343 XPO4Q9C0E2 1151 aaKnown RBP15.14■□□□□ 0.01
RUBCN-202ENST00000296343 ARPP21Q9UBL0 812 aaPredicted RBP15.14■□□□□ 0.01
RUBCN-202ENST00000296343 LEMD3Q9Y2U8 911 aa15.14■□□□□ 0.01
RUBCN-202ENST00000296343 MPHOSPH10O00566 681 aaKnown RBP15.13■□□□□ 0.01
RUBCN-202ENST00000296343 ONECUT3O60422 494 aaPredicted RBP15.13■□□□□ 0.01
RUBCN-202ENST00000296343 CHRNA5P30532 468 aa15.13■□□□□ 0.01
RUBCN-202ENST00000296343 TMTC3Q6ZXV5 915 aa15.13■□□□□ 0.01
RUBCN-202ENST00000296343 TTF2Q9UNY4 1162 aaKnown RBP15.13■□□□□ 0.01
RUBCN-202ENST00000296343 SCAF8Q9UPN6 1271 aaKnown RBP15.13■□□□□ 0.01
RUBCN-202ENST00000296343 A0A087X0B3 334 aa15.13■□□□□ 0.01
RUBCN-202ENST00000296343 PTGDRQ13258 359 aa15.13■□□□□ 0.01
RUBCN-202ENST00000296343 TMC6Q7Z403 805 aa15.13■□□□□ 0.01
RUBCN-202ENST00000296343 AMOTL1Q8IY63 956 aa15.13■□□□□ 0.01
RUBCN-202ENST00000296343 ANAPC4Q9UJX5 808 aa15.13■□□□□ 0.01
RUBCN-202ENST00000296343 TRIM75PA6NK02 468 aa15.13■□□□□ 0.01
RUBCN-202ENST00000296343 PPEF1O14829 653 aaPredicted RBP15.13■□□□□ 0.01
RUBCN-202ENST00000296343 SEMA3EO15041 775 aa15.13■□□□□ 0.01
RUBCN-202ENST00000296343 NAT10Q9H0A0 1025 aaKnown RBP15.13■□□□□ 0.01
RUBCN-202ENST00000296343 PP2D1A8MPX8 630 aa15.12■□□□□ 0.01
RUBCN-202ENST00000296343 SERPINC1P01008 464 aa15.12■□□□□ 0.01
RUBCN-202ENST00000296343 FUT2Q10981 343 aa15.12■□□□□ 0.01
RUBCN-202ENST00000296343 DHX8Q14562 1220 aaKnown RBP15.12■□□□□ 0.01
RUBCN-202ENST00000296343 RILPL1Q5EBL4 403 aa15.12■□□□□ 0.01
RUBCN-202ENST00000296343 EYA3Q99504 573 aa15.12■□□□□ 0.01
RUBCN-202ENST00000296343 RTFDC1Q9BY42 306 aaPredicted RBP15.12■□□□□ 0.01
RUBCN-202ENST00000296343 RNF26Q9BY78 433 aaPredicted RBP15.12■□□□□ 0.01
RUBCN-202ENST00000296343 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.12■□□□□ 0.01
RUBCN-202ENST00000296343 CACNA1SQ13698 1873 aa15.12■□□□□ 0.01
RUBCN-202ENST00000296343 USP27XA6NNY8 438 aa15.12■□□□□ 0.01
RUBCN-202ENST00000296343 BMP6P22004 513 aa15.12■□□□□ 0.01
RUBCN-202ENST00000296343 KRBA2Q6ZNG9 492 aa15.12■□□□□ 0.01
RUBCN-202ENST00000296343 PLA2G4DQ86XP0 818 aa15.12■□□□□ 0.01
RUBCN-202ENST00000296343 DPF2Q92785 391 aa15.12■□□□□ 0.01
RUBCN-202ENST00000296343 FANCLQ9NW38 375 aa15.12■□□□□ 0.01
RUBCN-202ENST00000296343 FBXO2Q9UK22 296 aaPredicted RBP15.12■□□□□ 0.01
RUBCN-202ENST00000296343 TNRC6CQ9HCJ0 1690 aaKnown RBP15.11■□□□□ 0.01
RUBCN-202ENST00000296343 CFAP100Q494V2 611 aa15.11■□□□□ 0.01
RUBCN-202ENST00000296343 RESP18Q5W5W9 173 aa15.11■□□□□ 0.01
RUBCN-202ENST00000296343 SYMPKQ92797 1274 aaKnown RBP15.11■□□□□ 0.01
RUBCN-202ENST00000296343 TMEM47Q9BQJ4 181 aa15.11■□□□□ 0.01
RUBCN-202ENST00000296343 C4AP0C0L4 1744 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms