RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 MLKLQ8NB16 471 aa15.05■□□□□ -0
HPS3-201ENST00000296051 SYNRGQ9UMZ2 1314 aa15.05■□□□□ -0
HPS3-201ENST00000296051 MMP10P09238 476 aa15.04■□□□□ -0
HPS3-201ENST00000296051 TBC1D8BQ0IIM8 1120 aa15.04■□□□□ -0
HPS3-201ENST00000296051 EFCAB6Q5THR3 1501 aa15.04■□□□□ -0
HPS3-201ENST00000296051 ARHGEF5Q12774 1597 aa15.04■□□□□ -0
HPS3-201ENST00000296051 TLDC2A0PJX2 215 aa15.04■□□□□ -0
HPS3-201ENST00000296051 PSDA5PKW4 1024 aaPredicted RBP15.04■□□□□ -0
HPS3-201ENST00000296051 FGFR1OPO95684 399 aaKnown RBP15.04■□□□□ -0
HPS3-201ENST00000296051 TNFAIP1Q13829 316 aa15.04■□□□□ -0
HPS3-201ENST00000296051 LONRF2Q1L5Z9 754 aa15.04■□□□□ -0
HPS3-201ENST00000296051 SND1Q7KZF4 910 aaKnown RBP eCLIP15.04■□□□□ -0
HPS3-201ENST00000296051 RGS22Q8NE09 1264 aa15.04■□□□□ -0
HPS3-201ENST00000296051 DCPSQ96C86 337 aaKnown RBP15.04■□□□□ -0
HPS3-201ENST00000296051 PAGR1Q9BTK6 254 aa15.04■□□□□ -0
HPS3-201ENST00000296051 GOLGA6CA6NDK9 693 aa15.04■□□□□ -0
HPS3-201ENST00000296051 ENC1O14682 589 aa15.04■□□□□ -0
HPS3-201ENST00000296051 FGAP02671 866 aa15.04■□□□□ -0
HPS3-201ENST00000296051 GOLGA6DP0CG33 693 aa15.04■□□□□ -0
HPS3-201ENST00000296051 RILPL1Q5EBL4 403 aa15.04■□□□□ -0
HPS3-201ENST00000296051 GOLGA6AQ9NYA3 693 aa15.04■□□□□ -0
HPS3-201ENST00000296051 CTSWP56202 376 aa15.04■□□□□ -0
HPS3-201ENST00000296051 BRDTQ58F21 947 aaPredicted RBP15.04■□□□□ -0
HPS3-201ENST00000296051 ERBB3P21860 1342 aa15.03■□□□□ -0
HPS3-201ENST00000296051 SMYD4Q8IYR2 804 aaPredicted RBP15.03■□□□□ -0
HPS3-201ENST00000296051 APPBP2Q92624 585 aa15.03■□□□□ -0
HPS3-201ENST00000296051 PARD6BQ9BYG5 372 aa15.03■□□□□ -0
HPS3-201ENST00000296051 CETN2P41208 172 aa15.03■□□□□ -0
HPS3-201ENST00000296051 LIG3P49916 1009 aa15.03■□□□□ -0
HPS3-201ENST00000296051 LRRC24Q50LG9 513 aa15.03■□□□□ -0
HPS3-201ENST00000296051 AKNAD1Q5T1N1 836 aa15.03■□□□□ -0
HPS3-201ENST00000296051 RMND1Q9NWS8 449 aa15.03■□□□□ -0
HPS3-201ENST00000296051 ANKRD62A6NC57 917 aa15.03■□□□□ -0
HPS3-201ENST00000296051 OPA1O60313 960 aa15.03■□□□□ -0
HPS3-201ENST00000296051 CHGBP05060 677 aa15.03■□□□□ -0
HPS3-201ENST00000296051 CMA1P23946 247 aa15.03■□□□□ -0
HPS3-201ENST00000296051 GNA11P29992 359 aa15.03■□□□□ -0
HPS3-201ENST00000296051 VPS36Q86VN1 386 aa15.03■□□□□ -0
HPS3-201ENST00000296051 SPATA5Q8NB90 893 aa15.03■□□□□ -0
HPS3-201ENST00000296051 SRP68Q9UHB9 627 aaKnown RBP15.03■□□□□ -0
HPS3-201ENST00000296051 TOB2Q14106 344 aaPredicted RBP15.02■□□□□ -0
HPS3-201ENST00000296051 CFAP58Q5T655 872 aa15.02■□□□□ -0
HPS3-201ENST00000296051 SPAG5Q96R06 1193 aa15.02■□□□□ -0
HPS3-201ENST00000296051 VPS54Q9P1Q0 977 aa15.02■□□□□ -0
HPS3-201ENST00000296051 CALML3P27482 149 aa15.02■□□□□ -0
HPS3-201ENST00000296051 RBM6P78332 1123 aaKnown RBP15.02■□□□□ -0
HPS3-201ENST00000296051 PRR36Q9H6K5 1346 aa15.02■□□□□ -0
HPS3-201ENST00000296051 FAN1Q9Y2M0 1017 aa15.02■□□□□ -0
HPS3-201ENST00000296051 GOLGA6L10A0A0M3HER8 536 aa15.02□□□□□ -0.01
HPS3-201ENST00000296051 MYCLP12524 364 aaPredicted RBP15.02□□□□□ -0.01
HPS3-201ENST00000296051 VAV2P52735 878 aa15.02□□□□□ -0.01
HPS3-201ENST00000296051 GOLPH3LQ9H4A5 285 aa15.02□□□□□ -0.01
HPS3-201ENST00000296051 ADCY9O60503 1353 aa15.02□□□□□ -0.01
HPS3-201ENST00000296051 KRT2P35908 639 aa15.02□□□□□ -0.01
HPS3-201ENST00000296051 LINC00301Q8NCQ3 95 aa15.02□□□□□ -0.01
HPS3-201ENST00000296051 CCDC97Q96F63 343 aaPredicted RBP15.02□□□□□ -0.01
HPS3-201ENST00000296051 ZNF274Q96GC6 653 aaPredicted RBP15.02□□□□□ -0.01
HPS3-201ENST00000296051 CCDC114Q96M63 670 aa15.02□□□□□ -0.01
HPS3-201ENST00000296051 NLRP1Q9C000 1473 aa15.01□□□□□ -0.01
HPS3-201ENST00000296051 PIK3AP1Q6ZUJ8 805 aa15.01□□□□□ -0.01
HPS3-201ENST00000296051 WDR70Q9NW82 654 aa15.01□□□□□ -0.01
HPS3-201ENST00000296051 MROH5Q6ZUA9 1318 aa15.01□□□□□ -0.01
HPS3-201ENST00000296051 RAD17O75943 681 aa15.01□□□□□ -0.01
HPS3-201ENST00000296051 GBP2P32456 591 aaPredicted RBP15.01□□□□□ -0.01
HPS3-201ENST00000296051 BCAMP50895 628 aa15.01□□□□□ -0.01
HPS3-201ENST00000296051 KRT79Q5XKE5 535 aa15.01□□□□□ -0.01
HPS3-201ENST00000296051 UIMC1Q96RL1 719 aa15.01□□□□□ -0.01
HPS3-201ENST00000296051 PLA2G4DQ86XP0 818 aa15.01□□□□□ -0.01
HPS3-201ENST00000296051 DBNDD1Q9H9R9 158 aa15.01□□□□□ -0.01
HPS3-201ENST00000296051 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.01□□□□□ -0.012e-6■■■■□ 22.9
HPS3-201ENST00000296051 GOLGA6BA6NDN3 693 aa15.01□□□□□ -0.01
HPS3-201ENST00000296051 HGSO14964 777 aaPredicted RBP15.01□□□□□ -0.01
HPS3-201ENST00000296051 SLC35F6Q8N357 371 aa15.01□□□□□ -0.01
HPS3-201ENST00000296051 PIGBQ92521 554 aa15.01□□□□□ -0.01
HPS3-201ENST00000296051 CLRN2A0PK11 232 aa15□□□□□ -0.01
HPS3-201ENST00000296051 ATP2B4P23634 1241 aa15□□□□□ -0.01
HPS3-201ENST00000296051 INPP5BP32019 993 aa15□□□□□ -0.01
HPS3-201ENST00000296051 IL6STP40189 918 aaPredicted RBP15□□□□□ -0.01
HPS3-201ENST00000296051 SEPT7Q16181 437 aaKnown RBP15□□□□□ -0.01
HPS3-201ENST00000296051 CYP26C1Q6V0L0 522 aa15□□□□□ -0.01
HPS3-201ENST00000296051 RTEL1Q9NZ71 1219 aa15□□□□□ -0.01
HPS3-201ENST00000296051 ZCCHC11Q5TAX3 1644 aaKnown RBP15□□□□□ -0.01
HPS3-201ENST00000296051 AP5Z1O43299 807 aa15□□□□□ -0.01
HPS3-201ENST00000296051 ATP1A2P50993 1020 aa15□□□□□ -0.01
HPS3-201ENST00000296051 PI16Q6UXB8 463 aa15□□□□□ -0.01
HPS3-201ENST00000296051 ZBTB38Q8NAP3 1195 aaPredicted RBP15□□□□□ -0.01
HPS3-201ENST00000296051 DSCC1Q9BVC3 393 aa15□□□□□ -0.01
HPS3-201ENST00000296051 NCOA3Q9Y6Q9 1424 aa15□□□□□ -0.01
HPS3-201ENST00000296051 GSTTP1A0A1W2PQM5 241 aa15□□□□□ -0.01
HPS3-201ENST00000296051 TMEM232C9JQI7 657 aa15□□□□□ -0.01
HPS3-201ENST00000296051 CDC25BP30305 580 aa15□□□□□ -0.01
HPS3-201ENST00000296051 HSPA1LP34931 641 aa15□□□□□ -0.01
HPS3-201ENST00000296051 PTPROQ16827 1216 aa15□□□□□ -0.01
HPS3-201ENST00000296051 DPH6Q7L8W6 267 aa15□□□□□ -0.01
HPS3-201ENST00000296051 PUS3Q9BZE2 481 aaKnown RBP15□□□□□ -0.01
HPS3-201ENST00000296051 SAMSN1Q9NSI8 373 aaKnown RBP15□□□□□ -0.01
HPS3-201ENST00000296051 TAF6LQ9Y6J9 622 aa15□□□□□ -0.01
HPS3-201ENST00000296051 RPAP1Q9BWH6 1393 aaPredicted RBP15□□□□□ -0.01
HPS3-201ENST00000296051 MAP3K15Q6ZN16 1313 aa15□□□□□ -0.01
HPS3-201ENST00000296051 NOP56O00567 594 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms