RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 CCDC122Q5T0U0 273 aa11.59□□□□□ -0.55
LMX1A-201ENST00000294816 ANKRD20A12PQ8NF67 263 aa11.59□□□□□ -0.55
LMX1A-201ENST00000294816 ABHD10Q9NUJ1 306 aa11.59□□□□□ -0.55
LMX1A-201ENST00000294816 FAM169AQ9Y6X4 670 aa11.59□□□□□ -0.55
LMX1A-201ENST00000294816 SHTN1A0MZ66 631 aa11.59□□□□□ -0.55
LMX1A-201ENST00000294816 ACTN4O43707 911 aaKnown RBP11.59□□□□□ -0.55
LMX1A-201ENST00000294816 GCP02774 474 aa11.59□□□□□ -0.55
LMX1A-201ENST00000294816 ATP1A1P05023 1023 aaKnown RBP11.59□□□□□ -0.55
LMX1A-201ENST00000294816 ARHGAP25P42331 645 aa11.59□□□□□ -0.55
LMX1A-201ENST00000294816 MATR3P43243 847 aaKnown RBP eCLIP11.59□□□□□ -0.55
LMX1A-201ENST00000294816 ZC3H6P61129 1189 aaKnown RBP11.59□□□□□ -0.55
LMX1A-201ENST00000294816 TTLL7Q6ZT98 887 aa11.59□□□□□ -0.55
LMX1A-201ENST00000294816 GNL3LQ9NVN8 582 aaKnown RBP11.59□□□□□ -0.55
LMX1A-201ENST00000294816 GOLGA6BA6NDN3 693 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 EXOC5O00471 708 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 CTDSPL2Q05D32 466 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 KRT31Q15323 416 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.58□□□□□ -0.56
LMX1A-201ENST00000294816 CCDC91Q7Z6B0 441 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 OXER1Q8TDS5 423 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.58□□□□□ -0.56
LMX1A-201ENST00000294816 FAM107BQ9H098 131 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 SAR1BQ9Y6B6 198 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 MCM3P25205 808 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 GNGT1P63211 74 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 UBXN1Q04323 297 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 RILPL1Q5EBL4 403 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 PLBD2Q8NHP8 589 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 COG1Q8WTW3 980 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 JADE2Q9NQC1 790 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 TBX22Q9Y458 520 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 EPN1Q9Y6I3 576 aaPredicted RBP11.58□□□□□ -0.56
LMX1A-201ENST00000294816 CDHR2Q9BYE9 1310 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 TSPOAP1O95153 1857 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 hCG_1642624A0A1W2PR95 340 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 FAM205CA6NFA0 338 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 MMP1P03956 469 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 CSB-PGBD3P0DP91 1061 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 CASP7P55210 303 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 WDR93Q6P2C0 686 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 SND1Q7KZF4 910 aaKnown RBP eCLIP11.58□□□□□ -0.56
LMX1A-201ENST00000294816 APTXQ7Z2E3 356 aaKnown RBP11.58□□□□□ -0.56
LMX1A-201ENST00000294816 WASF1Q92558 559 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 CCDC51Q96ER9 411 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 SELENOOQ9BVL4 669 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 NBPF3Q9H094 633 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 POLD4Q9HCU8 107 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 GPR108Q9NPR9 543 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 CEP131Q9UPN4 1083 aa11.58□□□□□ -0.56
LMX1A-201ENST00000294816 PRPF6O94906 941 aaKnown RBP11.57□□□□□ -0.56
LMX1A-201ENST00000294816 INPP5BP32019 993 aa11.57□□□□□ -0.56
LMX1A-201ENST00000294816 C2orf54Q08AI8 447 aa11.57□□□□□ -0.56
LMX1A-201ENST00000294816 MSL3Q8N5Y2 521 aaKnown RBP11.57□□□□□ -0.56
LMX1A-201ENST00000294816 RUFY1Q96T51 708 aa11.57□□□□□ -0.56
LMX1A-201ENST00000294816 AXIN2Q9Y2T1 843 aa11.57□□□□□ -0.56
LMX1A-201ENST00000294816 ZNF185O15231 689 aa11.57□□□□□ -0.56
LMX1A-201ENST00000294816 MYBL2P10244 700 aa11.57□□□□□ -0.56
LMX1A-201ENST00000294816 PPARDQ03181 441 aa11.57□□□□□ -0.56
LMX1A-201ENST00000294816 NTRK3Q16288 839 aa11.57□□□□□ -0.56
LMX1A-201ENST00000294816 RTN1Q16799 776 aa11.57□□□□□ -0.56
LMX1A-201ENST00000294816 NT5DC1Q5TFE4 455 aa11.57□□□□□ -0.56
LMX1A-201ENST00000294816 KAT2BQ92831 832 aa11.57□□□□□ -0.56
LMX1A-201ENST00000294816 PAGE5Q96GU1 130 aa11.57□□□□□ -0.56
LMX1A-201ENST00000294816 A0A087X0B3 334 aa11.56□□□□□ -0.56
LMX1A-201ENST00000294816 MACROD2A1Z1Q3 448 aa11.56□□□□□ -0.56
LMX1A-201ENST00000294816 NDUFA10O95299 355 aa11.56□□□□□ -0.56
LMX1A-201ENST00000294816 IRAK1P51617 712 aa11.56□□□□□ -0.56
LMX1A-201ENST00000294816 COPB1P53618 953 aaKnown RBP11.56□□□□□ -0.56
LMX1A-201ENST00000294816 AMPD2Q01433 879 aa11.56□□□□□ -0.56
LMX1A-201ENST00000294816 CCDC70Q6NSX1 233 aa11.56□□□□□ -0.56
LMX1A-201ENST00000294816 SYMPKQ92797 1274 aaKnown RBP11.56□□□□□ -0.56
LMX1A-201ENST00000294816 JAKMIP2Q96AA8 810 aa11.56□□□□□ -0.56
LMX1A-201ENST00000294816 PCMTD1Q96MG8 357 aaPredicted RBP11.56□□□□□ -0.56
LMX1A-201ENST00000294816 CAPS2Q9BXY5 557 aa11.56□□□□□ -0.56
LMX1A-201ENST00000294816 H7C1W4 665 aa11.56□□□□□ -0.56
LMX1A-201ENST00000294816 IPO7O95373 1038 aaKnown RBP11.56□□□□□ -0.56
LMX1A-201ENST00000294816 GPIHBP1Q8IV16 184 aa11.56□□□□□ -0.56
LMX1A-201ENST00000294816 AIDAQ96BJ3 306 aa11.56□□□□□ -0.56
LMX1A-201ENST00000294816 TMEM87BQ96K49 555 aa11.56□□□□□ -0.56
LMX1A-201ENST00000294816 VIPAS39Q9H9C1 493 aa11.56□□□□□ -0.56
LMX1A-201ENST00000294816 LY9Q9HBG7 655 aa11.56□□□□□ -0.56
LMX1A-201ENST00000294816 FAM217BQ9NTX9 383 aaPredicted RBP11.56□□□□□ -0.56
LMX1A-201ENST00000294816 MYO1AQ9UBC5 1043 aa11.56□□□□□ -0.56
LMX1A-201ENST00000294816 SRPRBQ9Y5M8 271 aaKnown RBP11.56□□□□□ -0.56
LMX1A-201ENST00000294816 CAPN7Q9Y6W3 813 aa11.56□□□□□ -0.56
LMX1A-201ENST00000294816 TRIM75PA6NK02 468 aa11.56□□□□□ -0.56
LMX1A-201ENST00000294816 PBX1P40424 430 aa11.56□□□□□ -0.56
LMX1A-201ENST00000294816 SETQ01105 290 aaPredicted RBP11.56□□□□□ -0.56
LMX1A-201ENST00000294816 DPYDQ12882 1025 aa11.56□□□□□ -0.56
LMX1A-201ENST00000294816 ZEB2O60315 1214 aa11.55□□□□□ -0.56
LMX1A-201ENST00000294816 FMNL1O95466 1100 aaPredicted RBP11.55□□□□□ -0.56
LMX1A-201ENST00000294816 A1BGP04217 495 aa11.55□□□□□ -0.56
LMX1A-201ENST00000294816 TATP17735 454 aaPredicted RBP11.55□□□□□ -0.56
LMX1A-201ENST00000294816 HNRNPH1P31943 449 aaKnown RBP11.55□□□□□ -0.56
LMX1A-201ENST00000294816 MAP2K2P36507 400 aa11.55□□□□□ -0.56
LMX1A-201ENST00000294816 AARSP49588 968 aaKnown RBP eCLIP11.55□□□□□ -0.56
LMX1A-201ENST00000294816 CKAP4Q07065 602 aaKnown RBP11.55□□□□□ -0.56
LMX1A-201ENST00000294816 CUL4BQ13620 913 aa11.55□□□□□ -0.56
LMX1A-201ENST00000294816 ZNF174Q15697 407 aa11.55□□□□□ -0.56
LMX1A-201ENST00000294816 METTL24Q5JXM2 366 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms