RNA–Protein interactions for RNA: ENST00000286301.7

CSF1R-201, Transcript of colony stimulating factor 1 receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1R, Length 3,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-201ENST00000286301 SMTNL1A8MU46 457 aa10.65□□□□□ -0.7
CSF1R-201ENST00000286301 SEMA3EO15041 775 aa10.65□□□□□ -0.7
CSF1R-201ENST00000286301 GYS1P13807 737 aa10.65□□□□□ -0.7
CSF1R-201ENST00000286301 IRX3P78415 501 aaPredicted RBP10.65□□□□□ -0.7
CSF1R-201ENST00000286301 FBXO33Q7Z6M2 555 aa10.65□□□□□ -0.7
CSF1R-201ENST00000286301 NLGN1Q8N2Q7 840 aa10.65□□□□□ -0.7
CSF1R-201ENST00000286301 CDK5RAP3Q96JB5 506 aa10.65□□□□□ -0.7
CSF1R-201ENST00000286301 TIGD1Q96MW7 591 aa10.65□□□□□ -0.7
CSF1R-201ENST00000286301 ZHX3Q9H4I2 956 aa10.65□□□□□ -0.7
CSF1R-201ENST00000286301 USP40Q9NVE5 1235 aa10.65□□□□□ -0.7
CSF1R-201ENST00000286301 FRMPD2Q68DX3 1309 aaPredicted RBP10.65□□□□□ -0.7
CSF1R-201ENST00000286301 ARFGEF2Q9Y6D5 1785 aa10.65□□□□□ -0.7
CSF1R-201ENST00000286301 HLA-DOAP06340 250 aa10.65□□□□□ -0.7
CSF1R-201ENST00000286301 SLC39A14Q15043 492 aa10.65□□□□□ -0.7
CSF1R-201ENST00000286301 DPCR1Q3MIW9 517 aa10.65□□□□□ -0.7
CSF1R-201ENST00000286301 IL17RAQ96F46 866 aa10.65□□□□□ -0.7
CSF1R-201ENST00000286301 RBM28Q9NW13 759 aaKnown RBP10.65□□□□□ -0.7
CSF1R-201ENST00000286301 KIAA1468Q9P260 1216 aa10.65□□□□□ -0.7
CSF1R-201ENST00000286301 MAPK8IP1Q9UQF2 711 aa10.65□□□□□ -0.7
CSF1R-201ENST00000286301 FAM205CA6NFA0 338 aa10.65□□□□□ -0.71
CSF1R-201ENST00000286301 H0YIN7 160 aa10.65□□□□□ -0.71
CSF1R-201ENST00000286301 PLCG2P16885 1265 aa10.65□□□□□ -0.71
CSF1R-201ENST00000286301 GTF2F1P35269 517 aaKnown RBP eCLIP10.65□□□□□ -0.71
CSF1R-201ENST00000286301 UBA7P41226 1012 aa10.65□□□□□ -0.71
CSF1R-201ENST00000286301 LETM2Q2VYF4 491 aa10.65□□□□□ -0.71
CSF1R-201ENST00000286301 TEX35Q5T0J7 233 aa10.65□□□□□ -0.71
CSF1R-201ENST00000286301 OGFRQ9NZT2 677 aa10.65□□□□□ -0.71
CSF1R-201ENST00000286301 PNPLA7Q6ZV29 1317 aa10.65□□□□□ -0.71
CSF1R-201ENST00000286301 USP54Q70EL1 1684 aa10.64□□□□□ -0.71
CSF1R-201ENST00000286301 FAM196BA6NMK8 535 aa10.64□□□□□ -0.71
CSF1R-201ENST00000286301 POLR3GO15318 223 aaPredicted RBP10.64□□□□□ -0.71
CSF1R-201ENST00000286301 BBOX1O75936 387 aa10.64□□□□□ -0.71
CSF1R-201ENST00000286301 C2CD5Q86YS7 1000 aa10.64□□□□□ -0.71
CSF1R-201ENST00000286301 TRMT44Q8IYL2 757 aaKnown RBP10.64□□□□□ -0.71
CSF1R-201ENST00000286301 POLR3EQ9NVU0 708 aa10.64□□□□□ -0.71
CSF1R-201ENST00000286301 PYCARDQ9ULZ3 195 aa10.64□□□□□ -0.71
CSF1R-201ENST00000286301 MMP1P03956 469 aa10.64□□□□□ -0.71
CSF1R-201ENST00000286301 JAKMIP3Q5VZ66 844 aa10.64□□□□□ -0.71
CSF1R-201ENST00000286301 USP17L2Q6R6M4 530 aa10.64□□□□□ -0.71
CSF1R-201ENST00000286301 SGMS1Q86VZ5 419 aa10.64□□□□□ -0.71
CSF1R-201ENST00000286301 TICAM2Q86XR7 235 aa10.64□□□□□ -0.71
CSF1R-201ENST00000286301 SERTAD1Q9UHV2 236 aa10.64□□□□□ -0.71
CSF1R-201ENST00000286301 PARP1P09874 1014 aaKnown RBP10.64□□□□□ -0.71
CSF1R-201ENST00000286301 TTC38Q5R3I4 469 aa10.64□□□□□ -0.71
CSF1R-201ENST00000286301 RBM26Q5T8P6 1007 aaKnown RBP10.64□□□□□ -0.71
CSF1R-201ENST00000286301 KRT222Q8N1A0 295 aa10.64□□□□□ -0.71
CSF1R-201ENST00000286301 RIOK1Q9BRS2 568 aaKnown RBP10.64□□□□□ -0.71
CSF1R-201ENST00000286301 BRIP1Q9BX63 1249 aa10.64□□□□□ -0.71
CSF1R-201ENST00000286301 VEZTQ9HBM0 779 aa10.64□□□□□ -0.71
CSF1R-201ENST00000286301 SFPQP23246 707 aaKnown RBP eCLIP10.63□□□□□ -0.71
CSF1R-201ENST00000286301 GRIK5Q16478 980 aa10.63□□□□□ -0.71
CSF1R-201ENST00000286301 AGXT2Q9BYV1 514 aa10.63□□□□□ -0.71
CSF1R-201ENST00000286301 COBLO75128 1261 aa10.63□□□□□ -0.71
CSF1R-201ENST00000286301 WDHD1O75717 1129 aaPredicted RBP10.63□□□□□ -0.71
CSF1R-201ENST00000286301 PLCD1P51178 756 aa10.63□□□□□ -0.71
CSF1R-201ENST00000286301 UBASH3AP57075 661 aa10.63□□□□□ -0.71
CSF1R-201ENST00000286301 TRMT1LQ7Z2T5 733 aaKnown RBP10.63□□□□□ -0.71
CSF1R-201ENST00000286301 CLEC10AQ8IUN9 316 aa10.63□□□□□ -0.71
CSF1R-201ENST00000286301 FEZ1Q99689 392 aa10.63□□□□□ -0.71
CSF1R-201ENST00000286301 TMOD2Q9NZR1 351 aa10.63□□□□□ -0.71
CSF1R-201ENST00000286301 KLRF2D3W0D1 207 aa10.63□□□□□ -0.71
CSF1R-201ENST00000286301 CUTAO60888 179 aa10.63□□□□□ -0.71
CSF1R-201ENST00000286301 CMA1P23946 247 aa10.63□□□□□ -0.71
CSF1R-201ENST00000286301 TNNI2P48788 182 aa10.63□□□□□ -0.71
CSF1R-201ENST00000286301 GNAQP50148 359 aa10.63□□□□□ -0.71
CSF1R-201ENST00000286301 SLC10A5Q5PT55 438 aa10.63□□□□□ -0.71
CSF1R-201ENST00000286301 SCG2P13521 617 aa10.62□□□□□ -0.71
CSF1R-201ENST00000286301 RXRBP28702 533 aa10.62□□□□□ -0.71
CSF1R-201ENST00000286301 ZNF75DP51815 510 aa10.62□□□□□ -0.71
CSF1R-201ENST00000286301 PTPN14Q15678 1187 aa10.62□□□□□ -0.71
CSF1R-201ENST00000286301 ANKRD20A12PQ8NF67 263 aa10.62□□□□□ -0.71
CSF1R-201ENST00000286301 BLZF1Q9H2G9 400 aa10.62□□□□□ -0.71
CSF1R-201ENST00000286301 ST7Q9NRC1 585 aa10.62□□□□□ -0.71
CSF1R-201ENST00000286301 CALCOCO1Q9P1Z2 691 aa10.62□□□□□ -0.71
CSF1R-201ENST00000286301 CASP1P29466 404 aa10.62□□□□□ -0.71
CSF1R-201ENST00000286301 ALDH1B1P30837 517 aa10.62□□□□□ -0.71
CSF1R-201ENST00000286301 PTGDRQ13258 359 aa10.62□□□□□ -0.71
CSF1R-201ENST00000286301 LONRF3Q496Y0 759 aa10.62□□□□□ -0.71
CSF1R-201ENST00000286301 STAG2Q8N3U4 1231 aa10.62□□□□□ -0.71
CSF1R-201ENST00000286301 MNS1Q8NEH6 495 aa10.62□□□□□ -0.71
CSF1R-201ENST00000286301 TBC1D16Q8TBP0 767 aa10.62□□□□□ -0.71
CSF1R-201ENST00000286301 TBC1D22AQ8WUA7 517 aa10.62□□□□□ -0.71
CSF1R-201ENST00000286301 ABCC6O95255 1503 aa10.62□□□□□ -0.71
CSF1R-201ENST00000286301 SKILP12757 684 aa10.62□□□□□ -0.71
CSF1R-201ENST00000286301 CHRNA5P30532 468 aa10.62□□□□□ -0.71
CSF1R-201ENST00000286301 INF2Q27J81 1249 aa10.62□□□□□ -0.71
CSF1R-201ENST00000286301 CCDC47Q96A33 483 aaKnown RBP10.62□□□□□ -0.71
CSF1R-201ENST00000286301 RRP36Q96EU6 259 aaKnown RBP10.62□□□□□ -0.71
CSF1R-201ENST00000286301 RNF26Q9BY78 433 aaPredicted RBP10.62□□□□□ -0.71
CSF1R-201ENST00000286301 CSRNP2Q9H175 543 aa10.62□□□□□ -0.71
CSF1R-201ENST00000286301 PCDHA5Q9Y5H7 936 aa10.62□□□□□ -0.71
CSF1R-201ENST00000286301 GOLGB1Q14789 3259 aaKnown RBP10.62□□□□□ -0.71
CSF1R-201ENST00000286301 CAVIN2O95810 425 aa10.61□□□□□ -0.71
CSF1R-201ENST00000286301 TOP1P11387 765 aaKnown RBP10.61□□□□□ -0.71
CSF1R-201ENST00000286301 CALML3P27482 149 aa10.61□□□□□ -0.71
CSF1R-201ENST00000286301 PDE6BP35913 854 aa10.61□□□□□ -0.71
CSF1R-201ENST00000286301 ZYXQ15942 572 aaKnown RBP10.61□□□□□ -0.71
CSF1R-201ENST00000286301 EEF2KMTQ96G04 330 aa10.61□□□□□ -0.71
CSF1R-201ENST00000286301 EPSTI1Q96J88 318 aa10.61□□□□□ -0.71
CSF1R-201ENST00000286301 DACH1Q9UI36 760 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms