RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 PSDA5PKW4 1024 aaPredicted RBP9.61□□□□□ -0.87
NIPBL-201ENST00000282516 SRGAP2BP0DMP2 458 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 DEUP1Q05D60 604 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 ATP6V0A1Q93050 837 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 KCNH3Q9ULD8 1083 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 ANGPTL3Q9Y5C1 460 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 GSTA4O15217 222 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 N4BP1O75113 896 aaKnown RBP9.61□□□□□ -0.87
NIPBL-201ENST00000282516 AMFRQ9UKV5 643 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 TROQ12816 1431 aaPredicted RBP9.61□□□□□ -0.87
NIPBL-201ENST00000282516 PRG4Q92954 1404 aaPredicted RBP9.61□□□□□ -0.87
NIPBL-201ENST00000282516 GOLGA4Q13439 2230 aaKnown RBP9.61□□□□□ -0.87
NIPBL-201ENST00000282516 SPDYE16A6NNV3 312 aaPredicted RBP9.61□□□□□ -0.87
NIPBL-201ENST00000282516 PDE4DQ08499 809 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 TRIM60Q495X7 471 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 SPDYE2Q495Y8 402 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 DHX32Q7L7V1 743 aaKnown RBP9.61□□□□□ -0.87
NIPBL-201ENST00000282516 SCINQ9Y6U3 715 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 CASP2P42575 452 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 PDE1AP54750 535 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 C20orf194Q5TEA3 1177 aa9.61□□□□□ -0.87
NIPBL-201ENST00000282516 NCOA1Q15788 1441 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 EEF1DP29692 281 aaKnown RBP9.6□□□□□ -0.87
NIPBL-201ENST00000282516 RAB3GAP1Q15042 981 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 BBOF1Q8ND07 529 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 CHMP6Q96FZ7 201 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 RUNDC3BQ96NL0 473 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 MRPL44Q9H9J2 332 aaKnown RBP9.6□□□□□ -0.87
NIPBL-201ENST00000282516 ASXL1Q8IXJ9 1541 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 PRPF6O94906 941 aaKnown RBP9.6□□□□□ -0.87
NIPBL-201ENST00000282516 ATF7P17544 494 aaPredicted RBP9.6□□□□□ -0.87
NIPBL-201ENST00000282516 CD19P15391 556 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 KIFC3Q9BVG8 833 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.6□□□□□ -0.87
NIPBL-201ENST00000282516 EIF3CLB5ME19 914 aaKnown RBP9.6□□□□□ -0.87
NIPBL-201ENST00000282516 CSRNP1Q96S65 589 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 EIF3CQ99613 913 aaKnown RBP9.6□□□□□ -0.87
NIPBL-201ENST00000282516 MBIPQ9NS73 344 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 RINT1Q6NUQ1 792 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 ANKRD42Q8N9B4 389 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 RLBP1P12271 317 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 LETM2Q2VYF4 491 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 KLHDC4Q8TBB5 520 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 PPWD1Q96BP3 646 aaKnown RBP9.6□□□□□ -0.87
NIPBL-201ENST00000282516 CENPKQ9BS16 269 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 DEXIO95424 95 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 ASPHQ12797 758 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 RASIP1Q5U651 963 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 ARMC9Q7Z3E5 817 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 NLRP3Q96P20 1036 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 IVNS1ABPQ9Y6Y0 642 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 TYW5A2RUC4 315 aaKnown RBP9.6□□□□□ -0.87
NIPBL-201ENST00000282516 CUTAO60888 179 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 LMNB2Q03252 620 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 TRIM42Q8IWZ5 723 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 TRIML1Q8N9V2 468 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 ZBTB9Q96C00 473 aa9.6□□□□□ -0.87
NIPBL-201ENST00000282516 GRM8O00222 908 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 HMGB3O15347 200 aaKnown RBP9.59□□□□□ -0.87
NIPBL-201ENST00000282516 BANK1Q8NDB2 785 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 CCPG1Q9ULG6 757 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 RUSC2Q8N2Y8 1516 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 ADCY8P40145 1251 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 KLHL30Q0D2K2 578 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 TCEANC2Q96MN5 208 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 SLC13A4Q9UKG4 626 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 TXLNGQ9NUQ3 528 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 PASKQ96RG2 1323 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 EXOC3O60645 756 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 SUN1O94901 812 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 STX1BP61266 288 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 GOLGA5Q8TBA6 731 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 CDKL2Q92772 493 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 IWS1Q96ST2 819 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 CHPF2Q9P2E5 772 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 CUL7Q14999 1698 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 H0YCG3 227 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 ADAMTS2O95450 1211 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 IFNB1P01574 187 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 TRIM58Q8NG06 486 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 TTI1O43156 1089 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 KRT19P08727 400 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 FANCCQ00597 558 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 LONRF2Q1L5Z9 754 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 RPAINQ86UA6 219 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 FBXO41Q8TF61 875 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 CCDC51Q96ER9 411 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 KDM3AQ9Y4C1 1321 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 ARHGEF9O43307 516 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 ZNF75DP51815 510 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 ZSCAN26Q16670 478 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 ANO1Q5XXA6 986 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 TPCN1Q9ULQ1 816 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 ECE1P42892 770 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 APOBRQ0VD83 1088 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 ZNF174Q15697 407 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 CREB3L3Q68CJ9 461 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 CEP19Q96LK0 163 aa9.59□□□□□ -0.87
NIPBL-201ENST00000282516 SCAF11Q99590 1463 aaKnown RBP9.59□□□□□ -0.87
NIPBL-201ENST00000282516 BEND3Q5T5X7 828 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms