RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 HACL1Q9UJ83 578 aa12.67□□□□□ -0.38
LRTM1-201ENST00000273286 FAM177BA6PVY3 158 aa12.66□□□□□ -0.38
LRTM1-201ENST00000273286 FZD9O00144 591 aa12.66□□□□□ -0.38
LRTM1-201ENST00000273286 ADAM23O75077 832 aa12.66□□□□□ -0.38
LRTM1-201ENST00000273286 HOXA10P31260 410 aaPredicted RBP12.66□□□□□ -0.38
LRTM1-201ENST00000273286 IARSP41252 1262 aaKnown RBP12.66□□□□□ -0.38
LRTM1-201ENST00000273286 LMOD3Q0VAK6 560 aa12.66□□□□□ -0.38
LRTM1-201ENST00000273286 PARP10Q53GL7 1025 aa12.66□□□□□ -0.38
LRTM1-201ENST00000273286 C8orf86Q6ZUL3 223 aa12.66□□□□□ -0.38
LRTM1-201ENST00000273286 GPC2Q8N158 579 aa12.66□□□□□ -0.38
LRTM1-201ENST00000273286 RPGRQ92834 1020 aaKnown RBP12.66□□□□□ -0.38
LRTM1-201ENST00000273286 UBE2OQ9C0C9 1292 aaKnown RBP12.66□□□□□ -0.38
LRTM1-201ENST00000273286 TMX4Q9H1E5 349 aaPredicted RBP12.66□□□□□ -0.38
LRTM1-201ENST00000273286 TAF1DQ9H5J8 278 aaPredicted RBP12.66□□□□□ -0.38
LRTM1-201ENST00000273286 MIS18AQ9NYP9 233 aa12.66□□□□□ -0.38
LRTM1-201ENST00000273286 DMGDHQ9UI17 866 aaKnown RBP12.66□□□□□ -0.38
LRTM1-201ENST00000273286 NOVA2Q9UNW9 492 aaKnown RBP12.66□□□□□ -0.38
LRTM1-201ENST00000273286 NUP98P52948 1817 aa12.66□□□□□ -0.38
LRTM1-201ENST00000273286 RNF123Q5XPI4 1314 aa12.66□□□□□ -0.38
LRTM1-201ENST00000273286 SPDYE3A6NKU9 549 aa12.65□□□□□ -0.38
LRTM1-201ENST00000273286 SPATA31C1P0DKV0 1188 aa12.65□□□□□ -0.38
LRTM1-201ENST00000273286 HSPA1AP0DMV8 641 aaKnown RBP12.65□□□□□ -0.38
LRTM1-201ENST00000273286 HSPA1BP0DMV9 641 aaKnown RBP12.65□□□□□ -0.38
LRTM1-201ENST00000273286 DGKZQ13574 1117 aa12.65□□□□□ -0.38
LRTM1-201ENST00000273286 COL13A1Q5TAT6 717 aaPredicted RBP12.65□□□□□ -0.38
LRTM1-201ENST00000273286 PPP1R42Q7Z4L9 355 aa12.65□□□□□ -0.38
LRTM1-201ENST00000273286 MICALL1Q8N3F8 863 aa12.65□□□□□ -0.38
LRTM1-201ENST00000273286 IGFLR1Q9H665 355 aa12.65□□□□□ -0.38
LRTM1-201ENST00000273286 ZNF277Q9NRM2 450 aaPredicted RBP12.65□□□□□ -0.38
LRTM1-201ENST00000273286 RRP7AQ9Y3A4 280 aaKnown RBP12.65□□□□□ -0.38
LRTM1-201ENST00000273286 RALBP1Q15311 655 aa12.64□□□□□ -0.39
LRTM1-201ENST00000273286 SYNE4Q8N205 404 aa12.64□□□□□ -0.39
LRTM1-201ENST00000273286 NGEFQ8N5V2 710 aa12.64□□□□□ -0.39
LRTM1-201ENST00000273286 RBM17Q96I25 401 aaKnown RBP12.64□□□□□ -0.39
LRTM1-201ENST00000273286 PNMA5Q96PV4 448 aa12.64□□□□□ -0.39
LRTM1-201ENST00000273286 CRAMP1Q96RY5 1269 aa12.64□□□□□ -0.39
LRTM1-201ENST00000273286 VPS33BQ9H267 617 aa12.64□□□□□ -0.39
LRTM1-201ENST00000273286 PASKQ96RG2 1323 aa12.64□□□□□ -0.39
LRTM1-201ENST00000273286 ABCC12Q96J65 1359 aa12.64□□□□□ -0.39
LRTM1-201ENST00000273286 MYL6BP14649 208 aa12.63□□□□□ -0.39
LRTM1-201ENST00000273286 EPHX2P34913 555 aa12.63□□□□□ -0.39
LRTM1-201ENST00000273286 IDH3AP50213 366 aa12.63□□□□□ -0.39
LRTM1-201ENST00000273286 EIF6P56537 245 aaKnown RBP12.63□□□□□ -0.39
LRTM1-201ENST00000273286 ZNF34Q8IZ26 560 aa12.63□□□□□ -0.39
LRTM1-201ENST00000273286 PRDM6Q9NQX0 595 aa12.63□□□□□ -0.39
LRTM1-201ENST00000273286 TSPYL4Q9UJ04 414 aa12.63□□□□□ -0.39
LRTM1-201ENST00000273286 SNED1Q8TER0 1413 aa12.63□□□□□ -0.39
LRTM1-201ENST00000273286 ZNF541Q9H0D2 1346 aa12.63□□□□□ -0.39
LRTM1-201ENST00000273286 CNTNAP1P78357 1384 aa12.63□□□□□ -0.39
LRTM1-201ENST00000273286 TMEM88BA6NKF7 163 aa12.62□□□□□ -0.39
LRTM1-201ENST00000273286 EPB42P16452 691 aa12.62□□□□□ -0.39
LRTM1-201ENST00000273286 COL9A3Q14050 684 aaPredicted RBP12.62□□□□□ -0.39
LRTM1-201ENST00000273286 EAPPQ56P03 285 aaPredicted RBP12.62□□□□□ -0.39
LRTM1-201ENST00000273286 HSP90AB3PQ58FF7 597 aa12.62□□□□□ -0.39
LRTM1-201ENST00000273286 PRRT3Q5FWE3 981 aa12.62□□□□□ -0.39
LRTM1-201ENST00000273286 TTLL7Q6ZT98 887 aa12.62□□□□□ -0.39
LRTM1-201ENST00000273286 GSX2Q9BZM3 304 aa12.62□□□□□ -0.39
LRTM1-201ENST00000273286 UBN2Q6ZU65 1347 aa12.62□□□□□ -0.39
LRTM1-201ENST00000273286 NFKB1P19838 968 aa12.62□□□□□ -0.39
LRTM1-201ENST00000273286 GPTP24298 496 aa12.62□□□□□ -0.39
LRTM1-201ENST00000273286 CCINQ13939 588 aa12.62□□□□□ -0.39
LRTM1-201ENST00000273286 EFCC1Q9HA90 598 aa12.62□□□□□ -0.39
LRTM1-201ENST00000273286 SLC6A14Q9UN76 642 aa12.62□□□□□ -0.39
LRTM1-201ENST00000273286 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.62□□□□□ -0.39
LRTM1-201ENST00000273286 K7ELQ4 463 aaPredicted RBP12.61□□□□□ -0.39
LRTM1-201ENST00000273286 NTSR2O95665 410 aa12.61□□□□□ -0.39
LRTM1-201ENST00000273286 RIPK4P57078 832 aa12.61□□□□□ -0.39
LRTM1-201ENST00000273286 SUSD4Q5VX71 490 aa12.61□□□□□ -0.39
LRTM1-201ENST00000273286 OLFM4Q6UX06 510 aa12.61□□□□□ -0.39
LRTM1-201ENST00000273286 C20orf204Q6ZNR8 217 aa12.61□□□□□ -0.39
LRTM1-201ENST00000273286 THUMPD2Q9BTF0 503 aaKnown RBP12.61□□□□□ -0.39
LRTM1-201ENST00000273286 ADAMTSL1Q8N6G6 1762 aa12.6□□□□□ -0.39
LRTM1-201ENST00000273286 FAM229AH3BQW9 127 aa12.6□□□□□ -0.39
LRTM1-201ENST00000273286 FURINP09958 794 aa12.6□□□□□ -0.39
LRTM1-201ENST00000273286 NID1P14543 1247 aa12.6□□□□□ -0.39
LRTM1-201ENST00000273286 GRNP28799 593 aaKnown RBP12.6□□□□□ -0.39
LRTM1-201ENST00000273286 INPP5BP32019 993 aa12.6□□□□□ -0.39
LRTM1-201ENST00000273286 SLC10A5Q5PT55 438 aa12.6□□□□□ -0.39
LRTM1-201ENST00000273286 SUPT20HQ8NEM7 779 aa12.6□□□□□ -0.39
LRTM1-201ENST00000273286 MYO19Q96H55 970 aa12.6□□□□□ -0.39
LRTM1-201ENST00000273286 UTP14AQ9BVJ6 771 aaKnown RBP12.6□□□□□ -0.39
LRTM1-201ENST00000273286 ARSDP51689 593 aa12.59□□□□□ -0.39
LRTM1-201ENST00000273286 CNTROBQ8N137 903 aa12.59□□□□□ -0.39
LRTM1-201ENST00000273286 DNAJB12Q9NXW2 375 aaKnown RBP12.59□□□□□ -0.39
LRTM1-201ENST00000273286 LILRB5O75023 590 aa12.58□□□□□ -0.4
LRTM1-201ENST00000273286 BBOX1O75936 387 aa12.58□□□□□ -0.4
LRTM1-201ENST00000273286 EIF2S2P20042 333 aaKnown RBP12.58□□□□□ -0.4
LRTM1-201ENST00000273286 TMPOP42166 694 aaKnown RBP12.58□□□□□ -0.4
LRTM1-201ENST00000273286 USP50Q70EL3 339 aaPredicted RBP12.58□□□□□ -0.4
LRTM1-201ENST00000273286 TMC4Q7Z404 712 aa12.58□□□□□ -0.4
LRTM1-201ENST00000273286 LRP10Q7Z4F1 713 aa12.58□□□□□ -0.4
LRTM1-201ENST00000273286 NIM1KQ8IY84 436 aa12.58□□□□□ -0.4
LRTM1-201ENST00000273286 ZMIZ1Q9ULJ6 1067 aa12.58□□□□□ -0.4
LRTM1-201ENST00000273286 ATP6V0A2Q9Y487 856 aa12.58□□□□□ -0.4
LRTM1-201ENST00000273286 RASSF10A6NK89 507 aa12.57□□□□□ -0.4
LRTM1-201ENST00000273286 HOXB7P09629 217 aa12.57□□□□□ -0.4
LRTM1-201ENST00000273286 FKBP5Q13451 457 aaPredicted RBP12.57□□□□□ -0.4
LRTM1-201ENST00000273286 C11orf91Q3C1V1 193 aa12.57□□□□□ -0.4
LRTM1-201ENST00000273286 PRIMPOLQ96LW4 560 aa12.57□□□□□ -0.4
LRTM1-201ENST00000273286 JPH1Q9HDC5 661 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms