RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 KIAA0825Q8IV33 1275 aa16.49■□□□□ 0.23
CNOT9-201ENST00000273064 FNBP4Q8N3X1 1017 aaPredicted RBP16.49■□□□□ 0.23
CNOT9-201ENST00000273064 SIGLEC1Q9BZZ2 1709 aa16.48■□□□□ 0.23
CNOT9-201ENST00000273064 SLF2Q8IX21 1173 aa16.48■□□□□ 0.23
CNOT9-201ENST00000273064 GGA1Q9UJY5 639 aa16.48■□□□□ 0.23
CNOT9-201ENST00000273064 ZBTB21Q9ULJ3 1066 aa16.48■□□□□ 0.23
CNOT9-201ENST00000273064 MB21D2Q8IYB1 491 aaPredicted RBP16.48■□□□□ 0.23
CNOT9-201ENST00000273064 ACBD3Q9H3P7 528 aa16.48■□□□□ 0.23
CNOT9-201ENST00000273064 WDHD1O75717 1129 aaPredicted RBP16.48■□□□□ 0.23
CNOT9-201ENST00000273064 USH1GQ495M9 461 aa16.48■□□□□ 0.23
CNOT9-201ENST00000273064 LUC7L2Q9Y383 392 aaKnown RBP16.48■□□□□ 0.23
CNOT9-201ENST00000273064 ZNF804BA4D1E1 1349 aa16.47■□□□□ 0.23
CNOT9-201ENST00000273064 MED23Q9ULK4 1368 aa16.47■□□□□ 0.23
CNOT9-201ENST00000273064 FDPSP14324 419 aaKnown RBP16.47■□□□□ 0.23
CNOT9-201ENST00000273064 TECP42680 631 aa16.47■□□□□ 0.23
CNOT9-201ENST00000273064 CCDC94Q9BW85 323 aaPredicted RBP16.47■□□□□ 0.23
CNOT9-201ENST00000273064 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.47■□□□□ 0.231e-10■■■■■ 74.5
CNOT9-201ENST00000273064 POLR3EQ9NVU0 708 aa16.47■□□□□ 0.23
CNOT9-201ENST00000273064 NCOA3Q9Y6Q9 1424 aa16.47■□□□□ 0.23
CNOT9-201ENST00000273064 TMCO5BA8MYB1 307 aa16.47■□□□□ 0.23
CNOT9-201ENST00000273064 BMP15O95972 392 aa16.47■□□□□ 0.23
CNOT9-201ENST00000273064 AMPD3Q01432 767 aa16.47■□□□□ 0.23
CNOT9-201ENST00000273064 SP4Q02446 784 aa16.47■□□□□ 0.23
CNOT9-201ENST00000273064 PRPF4BQ13523 1007 aaKnown RBP16.47■□□□□ 0.23
CNOT9-201ENST00000273064 USP49Q70CQ1 688 aa16.47■□□□□ 0.23
CNOT9-201ENST00000273064 NELFCDQ8IXH7 590 aa16.47■□□□□ 0.23
CNOT9-201ENST00000273064 EYA3Q99504 573 aa16.47■□□□□ 0.23
CNOT9-201ENST00000273064 TMEM232C9JQI7 657 aa16.47■□□□□ 0.23
CNOT9-201ENST00000273064 KLRF2D3W0D1 207 aa16.47■□□□□ 0.23
CNOT9-201ENST00000273064 LMAN1P49257 510 aa16.47■□□□□ 0.23
CNOT9-201ENST00000273064 CSGALNACT2Q8N6G5 542 aa16.47■□□□□ 0.23
CNOT9-201ENST00000273064 MLKLQ8NB16 471 aa16.47■□□□□ 0.23
CNOT9-201ENST00000273064 TSG101Q99816 390 aa16.47■□□□□ 0.23
CNOT9-201ENST00000273064 CHMP2AO43633 222 aa16.46■□□□□ 0.23
CNOT9-201ENST00000273064 EXOSC10Q01780 885 aaKnown RBP16.46■□□□□ 0.23
CNOT9-201ENST00000273064 MECOMQ03112 1051 aa16.46■□□□□ 0.23
CNOT9-201ENST00000273064 KRT79Q5XKE5 535 aa16.46■□□□□ 0.23
CNOT9-201ENST00000273064 MAEAQ7L5Y9 396 aa16.46■□□□□ 0.23
CNOT9-201ENST00000273064 CRACR2AQ9BSW2 395 aa16.46■□□□□ 0.23
CNOT9-201ENST00000273064 ADGRB2O60241 1585 aa16.46■□□□□ 0.23
CNOT9-201ENST00000273064 GSG1L2A8MUP6 293 aa16.46■□□□□ 0.23
CNOT9-201ENST00000273064 WWC2Q6AWC2 1192 aa16.46■□□□□ 0.23
CNOT9-201ENST00000273064 USP17L2Q6R6M4 530 aa16.46■□□□□ 0.23
CNOT9-201ENST00000273064 SRRTQ9BXP5 876 aaKnown RBP16.46■□□□□ 0.23
CNOT9-201ENST00000273064 AP5Z1O43299 807 aa16.46■□□□□ 0.23
CNOT9-201ENST00000273064 TMEM132AQ24JP5 1023 aa16.46■□□□□ 0.23
CNOT9-201ENST00000273064 ARFGAP3Q9NP61 516 aa16.46■□□□□ 0.23
CNOT9-201ENST00000273064 RBM28Q9NW13 759 aaKnown RBP16.46■□□□□ 0.23
CNOT9-201ENST00000273064 SMCO2A6NFE2 343 aa16.45■□□□□ 0.22
CNOT9-201ENST00000273064 ANTXR2P58335 489 aa16.45■□□□□ 0.22
CNOT9-201ENST00000273064 KRT222Q8N1A0 295 aa16.45■□□□□ 0.22
CNOT9-201ENST00000273064 RMND1Q9NWS8 449 aa16.45■□□□□ 0.22
CNOT9-201ENST00000273064 DNAJC21Q5F1R6 531 aaKnown RBP16.45■□□□□ 0.22
CNOT9-201ENST00000273064 FAM207AQ9NSI2 230 aaPredicted RBP16.45■□□□□ 0.22
CNOT9-201ENST00000273064 FBXO3Q9UK99 471 aa16.45■□□□□ 0.22
CNOT9-201ENST00000273064 TTF2Q9UNY4 1162 aaKnown RBP16.45■□□□□ 0.22
CNOT9-201ENST00000273064 TRAF5O00463 557 aa16.45■□□□□ 0.22
CNOT9-201ENST00000273064 SCG2P13521 617 aa16.45■□□□□ 0.22
CNOT9-201ENST00000273064 SYCP1Q15431 976 aa16.45■□□□□ 0.22
CNOT9-201ENST00000273064 SPECC1LQ69YQ0 1117 aa16.45■□□□□ 0.22
CNOT9-201ENST00000273064 WDR66Q8TBY9 1149 aa16.45■□□□□ 0.22
CNOT9-201ENST00000273064 NELFBQ8WX92 580 aa16.45■□□□□ 0.22
CNOT9-201ENST00000273064 MRFAP1L1Q96HT8 127 aa16.45■□□□□ 0.22
CNOT9-201ENST00000273064 CCDC42Q96M95 316 aa16.45■□□□□ 0.22
CNOT9-201ENST00000273064 RABEP2Q9H5N1 569 aa16.45■□□□□ 0.22
CNOT9-201ENST00000273064 USP42Q9H9J4 1324 aaKnown RBP16.45■□□□□ 0.22
CNOT9-201ENST00000273064 DIP2BQ9P265 1576 aa16.45■□□□□ 0.22
CNOT9-201ENST00000273064 IFNAR1P17181 557 aa16.45■□□□□ 0.22
CNOT9-201ENST00000273064 SLC16A2P36021 539 aa16.45■□□□□ 0.22
CNOT9-201ENST00000273064 BMS1Q14692 1282 aaKnown RBP16.45■□□□□ 0.22
CNOT9-201ENST00000273064 CCDC122Q5T0U0 273 aa16.45■□□□□ 0.22
CNOT9-201ENST00000273064 SPAG5Q96R06 1193 aa16.45■□□□□ 0.22
CNOT9-201ENST00000273064 POLD4Q9HCU8 107 aa16.45■□□□□ 0.22
CNOT9-201ENST00000273064 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.44■□□□□ 0.22
CNOT9-201ENST00000273064 A0A1W2PQ27 194 aa16.44■□□□□ 0.22
CNOT9-201ENST00000273064 A0A1W2PQ64 194 aa16.44■□□□□ 0.22
CNOT9-201ENST00000273064 A0A1W2PQD8 194 aa16.44■□□□□ 0.22
CNOT9-201ENST00000273064 IBSPP21815 317 aaPredicted RBP16.44■□□□□ 0.22
CNOT9-201ENST00000273064 GNA11P29992 359 aa16.44■□□□□ 0.22
CNOT9-201ENST00000273064 CACNB3P54284 484 aa16.44■□□□□ 0.22
CNOT9-201ENST00000273064 TBC1D9BQ66K14 1250 aa16.44■□□□□ 0.22
CNOT9-201ENST00000273064 LEKR1Q6ZMV7 388 aa16.44■□□□□ 0.22
CNOT9-201ENST00000273064 FMR1NBQ8N0W7 255 aaPredicted RBP16.44■□□□□ 0.22
CNOT9-201ENST00000273064 CTAGE1Q96RT6 745 aa16.44■□□□□ 0.22
CNOT9-201ENST00000273064 KCNF1Q9H3M0 494 aa16.44■□□□□ 0.22
CNOT9-201ENST00000273064 SMIM22K7EJ46 135 aa16.44■□□□□ 0.22
CNOT9-201ENST00000273064 MMP1P03956 469 aa16.44■□□□□ 0.22
CNOT9-201ENST00000273064 ANKRD13CQ8N6S4 541 aa16.44■□□□□ 0.22
CNOT9-201ENST00000273064 MINPP1Q9UNW1 487 aa16.44■□□□□ 0.22
CNOT9-201ENST00000273064 MEGF6O75095 1541 aa16.44■□□□□ 0.22
CNOT9-201ENST00000273064 BTDP43251 543 aa16.44■□□□□ 0.22
CNOT9-201ENST00000273064 PAK1Q13153 545 aa16.44■□□□□ 0.22
CNOT9-201ENST00000273064 NCAPD2Q15021 1401 aa16.44■□□□□ 0.22
CNOT9-201ENST00000273064 WDR78Q5VTH9 848 aa16.44■□□□□ 0.22
CNOT9-201ENST00000273064 SMARCC2Q8TAQ2 1214 aa16.44■□□□□ 0.22
CNOT9-201ENST00000273064 PALLDQ8WX93 1383 aa16.44■□□□□ 0.22
CNOT9-201ENST00000273064 SSR1P43307 286 aaKnown RBP16.43■□□□□ 0.22
CNOT9-201ENST00000273064 UBE4AQ14139 1066 aa16.43■□□□□ 0.22
CNOT9-201ENST00000273064 HLTFQ14527 1009 aaKnown RBP eCLIP16.43■□□□□ 0.22
CNOT9-201ENST00000273064 BLIDQ8IZY5 108 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms