RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 FBXO41Q8TF61 875 aa16.44■□□□□ 0.22
PDLIM2-201ENST00000265810 MXD3Q9BW11 206 aa16.44■□□□□ 0.22
PDLIM2-201ENST00000265810 BIN2Q9UBW5 565 aaPredicted RBP16.44■□□□□ 0.22
PDLIM2-201ENST00000265810 CFBP00751 764 aa16.44■□□□□ 0.22
PDLIM2-201ENST00000265810 GRIPAP1Q4V328 841 aa16.44■□□□□ 0.22
PDLIM2-201ENST00000265810 HSP90AA4PQ58FG1 418 aa16.44■□□□□ 0.22
PDLIM2-201ENST00000265810 IQUBQ8NA54 791 aa16.44■□□□□ 0.22
PDLIM2-201ENST00000265810 TDRD7Q8NHU6 1098 aaKnown RBP16.44■□□□□ 0.22
PDLIM2-201ENST00000265810 FAM200AQ8TCP9 573 aa16.44■□□□□ 0.22
PDLIM2-201ENST00000265810 ZNHIT6Q9NWK9 470 aaKnown RBP16.44■□□□□ 0.22
PDLIM2-201ENST00000265810 SULF1Q8IWU6 871 aa16.44■□□□□ 0.22
PDLIM2-201ENST00000265810 AIFM3Q96NN9 605 aa16.44■□□□□ 0.22
PDLIM2-201ENST00000265810 UIMC1Q96RL1 719 aa16.44■□□□□ 0.22
PDLIM2-201ENST00000265810 RNF26Q9BY78 433 aaPredicted RBP16.44■□□□□ 0.22
PDLIM2-201ENST00000265810 KCNH3Q9ULD8 1083 aa16.44■□□□□ 0.22
PDLIM2-201ENST00000265810 ADCY5O95622 1261 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 DPEP1P16444 411 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 IFNAR1P17181 557 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 TXKP42681 527 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 TSGA10IPQ3SY00 556 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 USP17L2Q6R6M4 530 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 BLIDQ8IZY5 108 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 CHURC1Q8WUH1 139 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 KANSL2Q9H9L4 492 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 HOMER2Q9NSB8 354 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 TAF6LQ9Y6J9 622 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 FAM196BA6NMK8 535 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 TMEM232C9JQI7 657 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 POLRMTO00411 1230 aaKnown RBP16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 ASIC1P78348 528 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 TSG101Q99816 390 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 BCL2L12Q9HB09 334 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 DLG5Q8TDM6 1919 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 NMT2O60551 498 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 SRGNP10124 158 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 EXOC1Q9NV70 894 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 ELP1O95163 1332 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 FMNL1O95466 1100 aaPredicted RBP16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 DDR1Q08345 913 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 PDE4CQ08493 712 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 FOXP4Q8IVH2 680 aaPredicted RBP16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 GLT8D2Q9H1C3 349 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 POLLQ9UGP5 575 aa16.43■□□□□ 0.22
PDLIM2-201ENST00000265810 YEATS4O95619 227 aa16.42■□□□□ 0.22
PDLIM2-201ENST00000265810 STYK1Q6J9G0 422 aa16.42■□□□□ 0.22
PDLIM2-201ENST00000265810 KCTD1Q719H9 257 aa16.42■□□□□ 0.22
PDLIM2-201ENST00000265810 DCPSQ96C86 337 aaKnown RBP16.42■□□□□ 0.22
PDLIM2-201ENST00000265810 LRRC27Q9C0I9 530 aa16.42■□□□□ 0.22
PDLIM2-201ENST00000265810 PKD2L1Q9P0L9 805 aa16.42■□□□□ 0.22
PDLIM2-201ENST00000265810 CUTAO60888 179 aa16.42■□□□□ 0.22
PDLIM2-201ENST00000265810 GLIPR1L2Q4G1C9 344 aa16.42■□□□□ 0.22
PDLIM2-201ENST00000265810 DGKHQ86XP1 1220 aa16.42■□□□□ 0.22
PDLIM2-201ENST00000265810 RMND1Q9NWS8 449 aa16.42■□□□□ 0.22
PDLIM2-201ENST00000265810 MRC1P22897 1456 aa16.42■□□□□ 0.22
PDLIM2-201ENST00000265810 MYO3BQ8WXR4 1341 aa16.41■□□□□ 0.22
PDLIM2-201ENST00000265810 RGL2O15211 777 aa16.41■□□□□ 0.22
PDLIM2-201ENST00000265810 POLR2DO15514 142 aaKnown RBP16.41■□□□□ 0.22
PDLIM2-201ENST00000265810 KIF20AO95235 890 aa16.41■□□□□ 0.22
PDLIM2-201ENST00000265810 MATR3P43243 847 aaKnown RBP eCLIP16.41■□□□□ 0.22
PDLIM2-201ENST00000265810 ZNF827Q17R98 1081 aa16.41■□□□□ 0.22
PDLIM2-201ENST00000265810 XRCC6P12956 609 aaKnown RBP eCLIP16.41■□□□□ 0.22
PDLIM2-201ENST00000265810 SLC16A2P36021 539 aa16.41■□□□□ 0.22
PDLIM2-201ENST00000265810 NSMFQ6X4W1 530 aa16.41■□□□□ 0.22
PDLIM2-201ENST00000265810 SPON1Q9HCB6 807 aa16.41■□□□□ 0.22
PDLIM2-201ENST00000265810 DAGLAQ9Y4D2 1042 aa16.41■□□□□ 0.22
PDLIM2-201ENST00000265810 CSADQ9Y600 493 aa16.41■□□□□ 0.22
PDLIM2-201ENST00000265810 TBC1D10BQ4KMP7 808 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-201ENST00000265810 STRIP1Q5VSL9 837 aa16.41■□□□□ 0.22
PDLIM2-201ENST00000265810 AOPEPQ8N6M6 819 aa16.41■□□□□ 0.22
PDLIM2-201ENST00000265810 ENAHQ8N8S7 591 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-201ENST00000265810 GJB4Q9NTQ9 266 aa16.41■□□□□ 0.22
PDLIM2-201ENST00000265810 COL14A1Q05707 1796 aaKnown RBP16.41■□□□□ 0.22
PDLIM2-201ENST00000265810 INF2Q27J81 1249 aa16.4■□□□□ 0.22
PDLIM2-201ENST00000265810 UVSSAQ2YD98 709 aa16.4■□□□□ 0.22
PDLIM2-201ENST00000265810 ZBED4O75132 1171 aa16.4■□□□□ 0.22
PDLIM2-201ENST00000265810 ZNF202O95125 648 aa16.4■□□□□ 0.22
PDLIM2-201ENST00000265810 GPATCH4Q5T3I0 446 aaKnown RBP16.4■□□□□ 0.22
PDLIM2-201ENST00000265810 MPHOSPH6Q99547 160 aaKnown RBP16.4■□□□□ 0.22
PDLIM2-201ENST00000265810 PSTPIP2Q9H939 334 aa16.4■□□□□ 0.22
PDLIM2-201ENST00000265810 TBCAO75347 108 aaKnown RBP16.4■□□□□ 0.22
PDLIM2-201ENST00000265810 LIG1P18858 919 aa16.4■□□□□ 0.22
PDLIM2-201ENST00000265810 LY9Q9HBG7 655 aa16.4■□□□□ 0.22
PDLIM2-201ENST00000265810 TMEM63CQ9P1W3 806 aa16.4■□□□□ 0.22
PDLIM2-201ENST00000265810 SUGT1Q9Y2Z0 365 aa16.4■□□□□ 0.22
PDLIM2-201ENST00000265810 PPP1R12BO60237 982 aaPredicted RBP16.39■□□□□ 0.21
PDLIM2-201ENST00000265810 PLEKHA8P1O95397 391 aa16.39■□□□□ 0.21
PDLIM2-201ENST00000265810 SFPQP23246 707 aaKnown RBP eCLIP16.39■□□□□ 0.21
PDLIM2-201ENST00000265810 SP4Q02446 784 aa16.39■□□□□ 0.21
PDLIM2-201ENST00000265810 ASPRV1Q53RT3 343 aa16.39■□□□□ 0.21
PDLIM2-201ENST00000265810 EPB41L4AQ9HCS5 686 aaPredicted RBP16.39■□□□□ 0.21
PDLIM2-201ENST00000265810 ZBTB12Q9Y330 459 aaPredicted RBP16.39■□□□□ 0.21
PDLIM2-201ENST00000265810 TRIM47Q96LD4 638 aa16.39■□□□□ 0.21
PDLIM2-201ENST00000265810 NAP1L4Q99733 375 aaKnown RBP16.39■□□□□ 0.21
PDLIM2-201ENST00000265810 PCDHA1Q9Y5I3 950 aa16.39■□□□□ 0.21
PDLIM2-201ENST00000265810 CLIC4Q9Y696 253 aa16.39■□□□□ 0.21
PDLIM2-201ENST00000265810 WTIPA6NIX2 430 aaPredicted RBP16.39■□□□□ 0.21
PDLIM2-201ENST00000265810 MYCNP04198 464 aaPredicted RBP16.39■□□□□ 0.21
PDLIM2-201ENST00000265810 MTIF2P46199 727 aaKnown RBP16.39■□□□□ 0.21
PDLIM2-201ENST00000265810 AS3MTQ9HBK9 375 aa16.39■□□□□ 0.21
PDLIM2-201ENST00000265810 ZBTB21Q9ULJ3 1066 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms