RNA–Protein interactions for RNA: ENST00000265195.9

SIL1-201, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SIL1, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-201ENST00000265195 PASKQ96RG2 1323 aa20.25■□□□□ 0.83
SIL1-201ENST00000265195 FAM196BA6NMK8 535 aa20.24■□□□□ 0.83
SIL1-201ENST00000265195 JAK2O60674 1132 aa20.24■□□□□ 0.83
SIL1-201ENST00000265195 PKP1Q13835 747 aa20.24■□□□□ 0.83
SIL1-201ENST00000265195 DGKHQ86XP1 1220 aa20.24■□□□□ 0.83
SIL1-201ENST00000265195 APOBEC3FQ8IUX4 373 aaKnown RBP20.24■□□□□ 0.83
SIL1-201ENST00000265195 ANKS1AQ92625 1134 aa20.24■□□□□ 0.83
SIL1-201ENST00000265195 LLPHQ9BRT6 129 aaKnown RBP20.24■□□□□ 0.83
SIL1-201ENST00000265195 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.24■□□□□ 0.83
SIL1-201ENST00000265195 TMEM39BQ9GZU3 492 aa20.24■□□□□ 0.83
SIL1-201ENST00000265195 AKR1B1P15121 316 aa20.24■□□□□ 0.83
SIL1-201ENST00000265195 PRAMEF18Q5VWM3 479 aa20.24■□□□□ 0.83
SIL1-201ENST00000265195 MICU3Q86XE3 530 aa20.24■□□□□ 0.83
SIL1-201ENST00000265195 CRACR2BQ8N4Y2 399 aaPredicted RBP20.24■□□□□ 0.83
SIL1-201ENST00000265195 NSUN7Q8NE18 718 aaKnown RBP20.24■□□□□ 0.83
SIL1-201ENST00000265195 CSRNP1Q96S65 589 aa20.24■□□□□ 0.83
SIL1-201ENST00000265195 DEFB129Q9H1M3 183 aa20.24■□□□□ 0.83
SIL1-201ENST00000265195 FAM217BQ9NTX9 383 aaPredicted RBP20.24■□□□□ 0.83
SIL1-201ENST00000265195 CDC27P30260 824 aa20.23■□□□□ 0.83
SIL1-201ENST00000265195 ADD1P35611 737 aaKnown RBP20.23■□□□□ 0.83
SIL1-201ENST00000265195 METAP2P50579 478 aaKnown RBP eCLIP20.23■□□□□ 0.83
SIL1-201ENST00000265195 SYNE3Q6ZMZ3 975 aa20.23■□□□□ 0.83
SIL1-201ENST00000265195 CDAN1Q8IWY9 1227 aa20.23■□□□□ 0.83
SIL1-201ENST00000265195 ZNF654Q8IZM8 581 aa20.23■□□□□ 0.83
SIL1-201ENST00000265195 SMARCC2Q8TAQ2 1214 aa20.23■□□□□ 0.83
SIL1-201ENST00000265195 SIPA1L1O43166 1804 aa20.23■□□□□ 0.83
SIL1-201ENST00000265195 RASA3Q14644 834 aa20.22■□□□□ 0.83
SIL1-201ENST00000265195 TATDN1Q6P1N9 297 aa20.22■□□□□ 0.83
SIL1-201ENST00000265195 CCDC144CPQ8IYA2 1237 aa20.22■□□□□ 0.83
SIL1-201ENST00000265195 ZDHHC9Q9Y397 364 aa20.22■□□□□ 0.83
SIL1-201ENST00000265195 CCDC178Q5BJE1 867 aa20.22■□□□□ 0.83
SIL1-201ENST00000265195 TAOK2Q9UL54 1235 aa20.22■□□□□ 0.83
SIL1-201ENST00000265195 GOLGA8AA7E2F4 631 aa20.21■□□□□ 0.83
SIL1-201ENST00000265195 PPFIA3O75145 1194 aa20.21■□□□□ 0.83
SIL1-201ENST00000265195 NOVP48745 357 aa20.21■□□□□ 0.83
SIL1-201ENST00000265195 TROAPQ12815 778 aa20.21■□□□□ 0.83
SIL1-201ENST00000265195 RAB3GAP1Q15042 981 aa20.21■□□□□ 0.83
SIL1-201ENST00000265195 CHMP4CQ96CF2 233 aa20.21■□□□□ 0.83
SIL1-201ENST00000265195 IGKV6D-41A0A0C4DH26 115 aa20.2■□□□□ 0.82
SIL1-201ENST00000265195 DHX16O60231 1041 aaKnown RBP20.2■□□□□ 0.82
SIL1-201ENST00000265195 RCAN1P53805 252 aa20.2■□□□□ 0.82
SIL1-201ENST00000265195 NUCB2P80303 420 aa20.2■□□□□ 0.82
SIL1-201ENST00000265195 TNFAIP1Q13829 316 aa20.2■□□□□ 0.82
SIL1-201ENST00000265195 CATIPQ7Z7H3 387 aa20.2■□□□□ 0.82
SIL1-201ENST00000265195 FANCBQ8NB91 859 aa20.2■□□□□ 0.82
SIL1-201ENST00000265195 NUP133Q8WUM0 1156 aa20.2■□□□□ 0.82
SIL1-201ENST00000265195 DDX11Q96FC9 970 aa20.2■□□□□ 0.82
SIL1-201ENST00000265195 CDCA5Q96FF9 252 aa20.2■□□□□ 0.82
SIL1-201ENST00000265195 CEP95Q96GE4 821 aa20.2■□□□□ 0.82
SIL1-201ENST00000265195 TEPSINQ96N21 525 aa20.2■□□□□ 0.82
SIL1-201ENST00000265195 TRPM7Q96QT4 1865 aa20.2■□□□□ 0.82
SIL1-201ENST00000265195 NID2Q14112 1375 aa20.2■□□□□ 0.82
SIL1-201ENST00000265195 PLIN4Q96Q06 1357 aa20.2■□□□□ 0.82
SIL1-201ENST00000265195 PTPDC1A2A3K4 754 aa20.2■□□□□ 0.82
SIL1-201ENST00000265195 SYT1P21579 422 aa20.2■□□□□ 0.82
SIL1-201ENST00000265195 TNNI2P48788 182 aa20.2■□□□□ 0.82
SIL1-201ENST00000265195 C1QTNF8P60827 252 aa20.2■□□□□ 0.82
SIL1-201ENST00000265195 CERKLQ49MI3 558 aaPredicted RBP20.2■□□□□ 0.82
SIL1-201ENST00000265195 CCDC17Q96LX7 622 aa20.2■□□□□ 0.82
SIL1-201ENST00000265195 TRIM34Q9BYJ4 488 aa20.2■□□□□ 0.82
SIL1-201ENST00000265195 STX8Q9UNK0 236 aa20.2■□□□□ 0.82
SIL1-201ENST00000265195 SSC5DA1L4H1 1573 aa20.19■□□□□ 0.82
SIL1-201ENST00000265195 NTRK3Q16288 839 aa20.19■□□□□ 0.82
SIL1-201ENST00000265195 TMEM47Q9BQJ4 181 aa20.19■□□□□ 0.82
SIL1-201ENST00000265195 HERC5Q9UII4 1024 aaKnown RBP20.19■□□□□ 0.82
SIL1-201ENST00000265195 CPLX1O14810 134 aa20.18■□□□□ 0.82
SIL1-201ENST00000265195 FDPSP14324 419 aaKnown RBP20.18■□□□□ 0.82
SIL1-201ENST00000265195 RRP1BQ14684 758 aaKnown RBP20.18■□□□□ 0.82
SIL1-201ENST00000265195 SHROOM1Q2M3G4 852 aaPredicted RBP20.18■□□□□ 0.82
SIL1-201ENST00000265195 CST9Q5W186 159 aa20.18■□□□□ 0.82
SIL1-201ENST00000265195 KAT14Q9H8E8 782 aa20.18■□□□□ 0.82
SIL1-201ENST00000265195 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.18■□□□□ 0.821e-9■■■■■ 61.7
SIL1-201ENST00000265195 MTMR4Q9NYA4 1195 aa20.18■□□□□ 0.82
SIL1-201ENST00000265195 DDAH1O94760 285 aa20.18■□□□□ 0.82
SIL1-201ENST00000265195 BRD1O95696 1058 aa20.18■□□□□ 0.82
SIL1-201ENST00000265195 RTN1Q16799 776 aa20.18■□□□□ 0.82
SIL1-201ENST00000265195 NBPF12Q5TAG4 269 aaPredicted RBP20.18■□□□□ 0.82
SIL1-201ENST00000265195 PPP2R3BQ9Y5P8 575 aa20.18■□□□□ 0.82
SIL1-201ENST00000265195 MPHOSPH10O00566 681 aaKnown RBP20.17■□□□□ 0.82
SIL1-201ENST00000265195 TBC1D12O60347 775 aa20.17■□□□□ 0.82
SIL1-201ENST00000265195 JAG1P78504 1218 aa20.17■□□□□ 0.82
SIL1-201ENST00000265195 HMGN5P82970 282 aaKnown RBP20.17■□□□□ 0.82
SIL1-201ENST00000265195 MAP3K10Q02779 954 aa20.17■□□□□ 0.82
SIL1-201ENST00000265195 LARP1BQ659C4 914 aaKnown RBP20.17■□□□□ 0.82
SIL1-201ENST00000265195 MIGA2Q7L4E1 593 aa20.17■□□□□ 0.82
SIL1-201ENST00000265195 PNMA1Q8ND90 353 aa20.17■□□□□ 0.82
SIL1-201ENST00000265195 STX6O43752 255 aa20.16■□□□□ 0.82
SIL1-201ENST00000265195 CALM1P0DP23 149 aa20.16■□□□□ 0.82
SIL1-201ENST00000265195 CALM2P0DP24 149 aa20.16■□□□□ 0.82
SIL1-201ENST00000265195 CALM3P0DP25 149 aa20.16■□□□□ 0.82
SIL1-201ENST00000265195 CLEC10AQ8IUN9 316 aa20.16■□□□□ 0.82
SIL1-201ENST00000265195 TNPO1Q92973 898 aaKnown RBP20.16■□□□□ 0.82
SIL1-201ENST00000265195 ZNF408Q9H9D4 720 aa20.16■□□□□ 0.82
SIL1-201ENST00000265195 CELF2O95319 508 aaKnown RBP20.16■□□□□ 0.82
SIL1-201ENST00000265195 PPP2R5BQ15173 497 aa20.16■□□□□ 0.82
SIL1-201ENST00000265195 CMTR1Q8N1G2 835 aaKnown RBP20.16■□□□□ 0.82
SIL1-201ENST00000265195 CCDC196A0A1B0GTZ2 297 aa20.15■□□□□ 0.82
SIL1-201ENST00000265195 GDF11O95390 407 aa20.15■□□□□ 0.82
SIL1-201ENST00000265195 TOP1P11387 765 aaKnown RBP20.15■□□□□ 0.82
SIL1-201ENST00000265195 GUCY1A2P33402 732 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms