RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 WDHD1O75717 1129 aaPredicted RBP18.75■□□□□ 0.59
PHRF1-201ENST00000264555 GTF2IP78347 998 aa18.75■□□□□ 0.59
PHRF1-201ENST00000264555 SPECC1LQ69YQ0 1117 aa18.75■□□□□ 0.59
PHRF1-201ENST00000264555 NELFBQ8WX92 580 aa18.75■□□□□ 0.59
PHRF1-201ENST00000264555 CHMP4BP1P59074 171 aa18.75■□□□□ 0.59
PHRF1-201ENST00000264555 FMNL3Q8IVF7 1028 aa18.75■□□□□ 0.59
PHRF1-201ENST00000264555 LMAN1P49257 510 aa18.75■□□□□ 0.59
PHRF1-201ENST00000264555 GALNT17Q6IS24 598 aa18.75■□□□□ 0.59
PHRF1-201ENST00000264555 MRVI1Q9Y6F6 885 aa18.75■□□□□ 0.59
PHRF1-201ENST00000264555 RCOR1Q9UKL0 485 aa18.75■□□□□ 0.59
PHRF1-201ENST00000264555 PPP6R2O75170 966 aa18.75■□□□□ 0.59
PHRF1-201ENST00000264555 TRMT44Q8IYL2 757 aaKnown RBP18.75■□□□□ 0.59
PHRF1-201ENST00000264555 ANKRD62A6NC57 917 aa18.74■□□□□ 0.59
PHRF1-201ENST00000264555 FMNL1O95466 1100 aaPredicted RBP18.74■□□□□ 0.59
PHRF1-201ENST00000264555 ZRSR2Q15696 482 aaKnown RBP18.74■□□□□ 0.59
PHRF1-201ENST00000264555 FCHSD1Q86WN1 690 aa18.74■□□□□ 0.59
PHRF1-201ENST00000264555 CAPZA3Q96KX2 299 aa18.74■□□□□ 0.59
PHRF1-201ENST00000264555 FOXP1Q9H334 677 aaPredicted RBP18.74■□□□□ 0.59
PHRF1-201ENST00000264555 STK32BQ9NY57 414 aa18.74■□□□□ 0.59
PHRF1-201ENST00000264555 SUPT20HQ8NEM7 779 aa18.74■□□□□ 0.59
PHRF1-201ENST00000264555 STAMQ92783 540 aa18.74■□□□□ 0.59
PHRF1-201ENST00000264555 BLZF1Q9H2G9 400 aa18.74■□□□□ 0.59
PHRF1-201ENST00000264555 USP40Q9NVE5 1235 aa18.74■□□□□ 0.59
PHRF1-201ENST00000264555 CTNNA2P26232 953 aa18.74■□□□□ 0.59
PHRF1-201ENST00000264555 PPP2R3AQ06190 1150 aa18.73■□□□□ 0.59
PHRF1-201ENST00000264555 RNF26Q9BY78 433 aaPredicted RBP18.73■□□□□ 0.59
PHRF1-201ENST00000264555 TAB2Q9NYJ8 693 aa18.73■□□□□ 0.59
PHRF1-201ENST00000264555 LEMD3Q9Y2U8 911 aa18.73■□□□□ 0.59
PHRF1-201ENST00000264555 EPB41P11171 864 aaKnown RBP18.73■□□□□ 0.59
PHRF1-201ENST00000264555 EVCP57679 992 aa18.73■□□□□ 0.59
PHRF1-201ENST00000264555 TEKT1Q969V4 418 aa18.73■□□□□ 0.59
PHRF1-201ENST00000264555 CLIC6Q96NY7 704 aa18.73■□□□□ 0.59
PHRF1-201ENST00000264555 POLD1P28340 1107 aa18.73■□□□□ 0.59
PHRF1-201ENST00000264555 NAPGQ99747 312 aaPredicted RBP18.73■□□□□ 0.59
PHRF1-201ENST00000264555 TNS3Q68CZ2 1445 aa18.73■□□□□ 0.59
PHRF1-201ENST00000264555 SH2B2O14492 632 aaPredicted RBP18.72■□□□□ 0.59
PHRF1-201ENST00000264555 VWA3BQ502W6 1294 aa18.72■□□□□ 0.59
PHRF1-201ENST00000264555 THRAP3Q9Y2W1 955 aaKnown RBP18.72■□□□□ 0.59
PHRF1-201ENST00000264555 ADGRB1O14514 1584 aa18.72■□□□□ 0.59
PHRF1-201ENST00000264555 CPS1P31327 1500 aa18.72■□□□□ 0.59
PHRF1-201ENST00000264555 KRT9P35527 623 aa18.72■□□□□ 0.59
PHRF1-201ENST00000264555 PDE6BP35913 854 aa18.72■□□□□ 0.59
PHRF1-201ENST00000264555 ERFEQ4G0M1 354 aa18.72■□□□□ 0.59
PHRF1-201ENST00000264555 DCAF17Q5H9S7 520 aaPredicted RBP18.72■□□□□ 0.59
PHRF1-201ENST00000264555 TMEM87AQ8NBN3 555 aa18.72■□□□□ 0.59
PHRF1-201ENST00000264555 TDRD7Q8NHU6 1098 aaKnown RBP18.72■□□□□ 0.59
PHRF1-201ENST00000264555 FRMD4BQ9Y2L6 1034 aa18.72■□□□□ 0.59
PHRF1-201ENST00000264555 CETN3O15182 167 aa18.72■□□□□ 0.59
PHRF1-201ENST00000264555 B4DLN1 442 aa18.72■□□□□ 0.59
PHRF1-201ENST00000264555 NBPF14Q5TI25 921 aa18.72■□□□□ 0.59
PHRF1-201ENST00000264555 MICALCLQ6ZW33 695 aa18.72■□□□□ 0.59
PHRF1-201ENST00000264555 FAM107BQ9H098 131 aa18.72■□□□□ 0.59
PHRF1-201ENST00000264555 XDHP47989 1333 aa18.72■□□□□ 0.59
PHRF1-201ENST00000264555 BTDP43251 543 aa18.72■□□□□ 0.59
PHRF1-201ENST00000264555 KIF23Q02241 960 aaPredicted RBP18.72■□□□□ 0.59
PHRF1-201ENST00000264555 ZNF335Q9H4Z2 1342 aaPredicted RBP18.72■□□□□ 0.59
PHRF1-201ENST00000264555 RFX7Q2KHR2 1363 aa18.72■□□□□ 0.59
PHRF1-201ENST00000264555 KLRF2D3W0D1 207 aa18.71■□□□□ 0.59
PHRF1-201ENST00000264555 PHACTR2O75167 634 aa18.71■□□□□ 0.59
PHRF1-201ENST00000264555 RESTQ13127 1097 aa18.71■□□□□ 0.59
PHRF1-201ENST00000264555 PAF1Q8N7H5 531 aa18.71■□□□□ 0.59
PHRF1-201ENST00000264555 RHOXF2BP0C7M4 288 aa18.71■□□□□ 0.59
PHRF1-201ENST00000264555 TCP10Q12799 353 aa18.71■□□□□ 0.59
PHRF1-201ENST00000264555 TIGD1Q96MW7 591 aa18.71■□□□□ 0.59
PHRF1-201ENST00000264555 RHOXF2Q9BQY4 288 aa18.71■□□□□ 0.59
PHRF1-201ENST00000264555 LINC00301Q8NCQ3 95 aa18.71■□□□□ 0.59
PHRF1-201ENST00000264555 PIH1D3Q9NQM4 214 aaKnown RBP18.71■□□□□ 0.59
PHRF1-201ENST00000264555 OGFRQ9NZT2 677 aa18.71■□□□□ 0.59
PHRF1-201ENST00000264555 BIN2Q9UBW5 565 aaPredicted RBP18.71■□□□□ 0.59
PHRF1-201ENST00000264555 HOOK3Q86VS8 718 aa18.7■□□□□ 0.58
PHRF1-201ENST00000264555 LCORLQ8N3X6 602 aa18.7■□□□□ 0.58
PHRF1-201ENST00000264555 ZBTB21Q9ULJ3 1066 aa18.7■□□□□ 0.58
PHRF1-201ENST00000264555 CALUO43852 315 aaPredicted RBP18.7■□□□□ 0.58
PHRF1-201ENST00000264555 MAP2K1Q02750 393 aaPredicted RBP18.7■□□□□ 0.58
PHRF1-201ENST00000264555 HERC4Q5GLZ8 1057 aaPredicted RBP18.7■□□□□ 0.58
PHRF1-201ENST00000264555 SUSD4Q5VX71 490 aa18.7■□□□□ 0.58
PHRF1-201ENST00000264555 DNM3Q9UQ16 869 aa18.7■□□□□ 0.58
PHRF1-201ENST00000264555 DYMQ7RTS9 669 aa18.7■□□□□ 0.58
PHRF1-201ENST00000264555 CCDC51Q96ER9 411 aa18.7■□□□□ 0.58
PHRF1-201ENST00000264555 RASAL2Q9UJF2 1139 aa18.7■□□□□ 0.58
PHRF1-201ENST00000264555 OPA1O60313 960 aa18.7■□□□□ 0.58
PHRF1-201ENST00000264555 LIFRP42702 1097 aa18.7■□□□□ 0.58
PHRF1-201ENST00000264555 RAPGEF1Q13905 1077 aa18.7■□□□□ 0.58
PHRF1-201ENST00000264555 NCAPH2Q6IBW4 605 aa18.7■□□□□ 0.58
PHRF1-201ENST00000264555 PLS1Q14651 629 aa18.69■□□□□ 0.58
PHRF1-201ENST00000264555 HLFQ16534 295 aa18.69■□□□□ 0.58
PHRF1-201ENST00000264555 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.69■□□□□ 0.58
PHRF1-201ENST00000264555 NEURL4Q96JN8 1562 aa18.69■□□□□ 0.58
PHRF1-201ENST00000264555 IMPG2Q9BZV3 1241 aa18.69■□□□□ 0.58
PHRF1-201ENST00000264555 NT5C3AQ9H0P0 336 aa18.69■□□□□ 0.58
PHRF1-201ENST00000264555 PRKAB2O43741 272 aa18.69■□□□□ 0.58
PHRF1-201ENST00000264555 IFNAR1P17181 557 aa18.69■□□□□ 0.58
PHRF1-201ENST00000264555 RASGRF1Q13972 1273 aa18.69■□□□□ 0.58
PHRF1-201ENST00000264555 TOB2Q14106 344 aaPredicted RBP18.69■□□□□ 0.58
PHRF1-201ENST00000264555 CCDC84Q86UT8 332 aaPredicted RBP18.69■□□□□ 0.58
PHRF1-201ENST00000264555 ADAMTS13Q76LX8 1427 aa18.69■□□□□ 0.58
PHRF1-201ENST00000264555 MCAMP43121 646 aa18.69■□□□□ 0.58
PHRF1-201ENST00000264555 LRRC8AQ8IWT6 810 aa18.69■□□□□ 0.58
PHRF1-201ENST00000264555 FLAD1Q8NFF5 587 aa18.69■□□□□ 0.58
PHRF1-201ENST00000264555 CHMP2AO43633 222 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms