RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 GTF2F1P35269 517 aaKnown RBP eCLIP14.22□□□□□ -0.13
HERC6-201ENST00000264346 UBXN1Q04323 297 aa14.22□□□□□ -0.13
HERC6-201ENST00000264346 RAD51AP2Q09MP3 1159 aa14.22□□□□□ -0.13
HERC6-201ENST00000264346 MSL1Q68DK7 614 aa14.22□□□□□ -0.13
HERC6-201ENST00000264346 USP17L1Q7RTZ2 530 aa14.22□□□□□ -0.13
HERC6-201ENST00000264346 SYMPKQ92797 1274 aaKnown RBP14.22□□□□□ -0.13
HERC6-201ENST00000264346 KCNB2Q92953 911 aa14.22□□□□□ -0.13
HERC6-201ENST00000264346 EPB41L4AQ9HCS5 686 aaPredicted RBP14.22□□□□□ -0.13
HERC6-201ENST00000264346 CCNT1O60563 726 aaKnown RBP14.22□□□□□ -0.13
HERC6-201ENST00000264346 FMNL1O95466 1100 aaPredicted RBP14.22□□□□□ -0.13
HERC6-201ENST00000264346 HSP90B2PQ58FF3 399 aa14.22□□□□□ -0.13
HERC6-201ENST00000264346 KCNF1Q9H3M0 494 aa14.22□□□□□ -0.13
HERC6-201ENST00000264346 EXOC1Q9NV70 894 aa14.22□□□□□ -0.13
HERC6-201ENST00000264346 GGA1Q9UJY5 639 aa14.22□□□□□ -0.13
HERC6-201ENST00000264346 MMP1P03956 469 aa14.22□□□□□ -0.13
HERC6-201ENST00000264346 GNAQP50148 359 aa14.22□□□□□ -0.13
HERC6-201ENST00000264346 DOK7Q18PE1 504 aa14.22□□□□□ -0.13
HERC6-201ENST00000264346 TMEM266Q2M3C6 531 aa14.22□□□□□ -0.13
HERC6-201ENST00000264346 TDRD12Q587J7 1177 aaKnown RBP14.22□□□□□ -0.13
HERC6-201ENST00000264346 CCDC70Q6NSX1 233 aa14.22□□□□□ -0.13
HERC6-201ENST00000264346 CCDC148Q8NFR7 591 aa14.22□□□□□ -0.13
HERC6-201ENST00000264346 MRFAP1L1Q96HT8 127 aa14.22□□□□□ -0.13
HERC6-201ENST00000264346 BMP15O95972 392 aa14.21□□□□□ -0.13
HERC6-201ENST00000264346 CACNA2D4Q7Z3S7 1137 aa14.21□□□□□ -0.13
HERC6-201ENST00000264346 SLF2Q8IX21 1173 aa14.21□□□□□ -0.13
HERC6-201ENST00000264346 SLC4A9Q96Q91 983 aa14.21□□□□□ -0.13
HERC6-201ENST00000264346 FRMPD2Q68DX3 1309 aaPredicted RBP14.21□□□□□ -0.13
HERC6-201ENST00000264346 CDHR2Q9BYE9 1310 aa14.21□□□□□ -0.13
HERC6-201ENST00000264346 PARP1P09874 1014 aaKnown RBP14.21□□□□□ -0.13
HERC6-201ENST00000264346 MATR3P43243 847 aaKnown RBP eCLIP14.21□□□□□ -0.13
HERC6-201ENST00000264346 WDR66Q8TBY9 1149 aa14.21□□□□□ -0.13
HERC6-201ENST00000264346 HPS5Q9UPZ3 1129 aa14.21□□□□□ -0.13
HERC6-201ENST00000264346 SYNRGQ9UMZ2 1314 aa14.21□□□□□ -0.14
HERC6-201ENST00000264346 USP27XA6NNY8 438 aa14.21□□□□□ -0.14
HERC6-201ENST00000264346 SMIM22K7EJ46 135 aa14.21□□□□□ -0.14
HERC6-201ENST00000264346 LRRC47Q8N1G4 583 aaKnown RBP14.21□□□□□ -0.14
HERC6-201ENST00000264346 RRP36Q96EU6 259 aaKnown RBP14.21□□□□□ -0.14
HERC6-201ENST00000264346 CARD6Q9BX69 1037 aa14.21□□□□□ -0.14
HERC6-201ENST00000264346 ST7Q9NRC1 585 aa14.21□□□□□ -0.14
HERC6-201ENST00000264346 SAMSN1Q9NSI8 373 aaKnown RBP14.21□□□□□ -0.14
HERC6-201ENST00000264346 OVOS2A0A0G2JMS6 1433 aa14.2□□□□□ -0.14
HERC6-201ENST00000264346 LIFRP42702 1097 aa14.2□□□□□ -0.14
HERC6-201ENST00000264346 ARID5AQ03989 594 aa14.2□□□□□ -0.14
HERC6-201ENST00000264346 GUCA1BQ9UMX6 200 aa14.2□□□□□ -0.14
HERC6-201ENST00000264346 USP49Q70CQ1 688 aa14.2□□□□□ -0.14
HERC6-201ENST00000264346 DYMQ7RTS9 669 aa14.2□□□□□ -0.14
HERC6-201ENST00000264346 C6orf50Q9HD87 102 aa14.2□□□□□ -0.14
HERC6-201ENST00000264346 BIN2Q9UBW5 565 aaPredicted RBP14.2□□□□□ -0.14
HERC6-201ENST00000264346 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.2□□□□□ -0.14
HERC6-201ENST00000264346 PSMA7O14818 248 aa14.2□□□□□ -0.14
HERC6-201ENST00000264346 SCG2P13521 617 aa14.2□□□□□ -0.14
HERC6-201ENST00000264346 KLRK1P26718 216 aa14.2□□□□□ -0.14
HERC6-201ENST00000264346 NKX1-1Q15270 411 aaPredicted RBP14.2□□□□□ -0.14
HERC6-201ENST00000264346 ZNF569Q5MCW4 686 aa14.2□□□□□ -0.14
HERC6-201ENST00000264346 FKBP15Q5T1M5 1219 aa14.2□□□□□ -0.14
HERC6-201ENST00000264346 TCERG1LQ5VWI1 586 aa14.2□□□□□ -0.14
HERC6-201ENST00000264346 ZNF34Q8IZ26 560 aa14.2□□□□□ -0.14
HERC6-201ENST00000264346 ENAHQ8N8S7 591 aaPredicted RBP14.2□□□□□ -0.14
HERC6-201ENST00000264346 MLKLQ8NB16 471 aa14.2□□□□□ -0.14
HERC6-201ENST00000264346 EYA3Q99504 573 aa14.2□□□□□ -0.14
HERC6-201ENST00000264346 ALDH8A1Q9H2A2 487 aaPredicted RBP14.2□□□□□ -0.14
HERC6-201ENST00000264346 HLA-DOAP06340 250 aa14.19□□□□□ -0.14
HERC6-201ENST00000264346 RBM6P78332 1123 aaKnown RBP14.19□□□□□ -0.14
HERC6-201ENST00000264346 SHC4Q6S5L8 630 aa14.19□□□□□ -0.14
HERC6-201ENST00000264346 MMRN2Q9H8L6 949 aa14.19□□□□□ -0.14
HERC6-201ENST00000264346 ERCC6LQ2NKX8 1250 aa14.19□□□□□ -0.14
HERC6-201ENST00000264346 UTP14CQ5TAP6 766 aaKnown RBP14.19□□□□□ -0.14
HERC6-201ENST00000264346 CCDC102AQ96A19 550 aa14.19□□□□□ -0.14
HERC6-201ENST00000264346 TMEM232C9JQI7 657 aa14.19□□□□□ -0.14
HERC6-201ENST00000264346 GRIN1Q05586 938 aa14.19□□□□□ -0.14
HERC6-201ENST00000264346 IGDCC4Q8TDY8 1250 aa14.19□□□□□ -0.14
HERC6-201ENST00000264346 FAM84BQ96KN1 310 aaPredicted RBP14.19□□□□□ -0.14
HERC6-201ENST00000264346 AKR1B15C9JRZ8 316 aaPredicted RBP14.18□□□□□ -0.14
HERC6-201ENST00000264346 KLRF2D3W0D1 207 aa14.18□□□□□ -0.14
HERC6-201ENST00000264346 CCDC175P0C221 793 aa14.18□□□□□ -0.14
HERC6-201ENST00000264346 BTDP43251 543 aa14.18□□□□□ -0.14
HERC6-201ENST00000264346 CCDC40Q4G0X9 1142 aa14.18□□□□□ -0.14
HERC6-201ENST00000264346 LRP10Q7Z4F1 713 aa14.18□□□□□ -0.14
HERC6-201ENST00000264346 RAB34Q9BZG1 259 aa14.18□□□□□ -0.14
HERC6-201ENST00000264346 SEPT11Q9NVA2 429 aaKnown RBP14.18□□□□□ -0.14
HERC6-201ENST00000264346 CAMTA2O94983 1202 aa14.18□□□□□ -0.14
HERC6-201ENST00000264346 MYO1BO43795 1136 aa14.18□□□□□ -0.14
HERC6-201ENST00000264346 CCDC181Q5TID7 509 aa14.18□□□□□ -0.14
HERC6-201ENST00000264346 TBC1D7Q9P0N9 293 aa14.18□□□□□ -0.14
HERC6-201ENST00000264346 PRR29P0C7W0 189 aa14.17□□□□□ -0.14
HERC6-201ENST00000264346 PDE4DQ08499 809 aa14.17□□□□□ -0.14
HERC6-201ENST00000264346 MCM6Q14566 821 aa14.17□□□□□ -0.14
HERC6-201ENST00000264346 SPA17Q15506 151 aa14.17□□□□□ -0.14
HERC6-201ENST00000264346 USP17L2Q6R6M4 530 aa14.17□□□□□ -0.14
HERC6-201ENST00000264346 BLIDQ8IZY5 108 aa14.17□□□□□ -0.14
HERC6-201ENST00000264346 CAPZA3Q96KX2 299 aa14.17□□□□□ -0.14
HERC6-201ENST00000264346 PLA2G12BQ9BX93 195 aa14.17□□□□□ -0.14
HERC6-201ENST00000264346 BSDC1Q9NW68 430 aaPredicted RBP14.17□□□□□ -0.14
HERC6-201ENST00000264346 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.17□□□□□ -0.14
HERC6-201ENST00000264346 TMEM51Q9NW97 253 aa14.17□□□□□ -0.14
HERC6-201ENST00000264346 RMND1Q9NWS8 449 aa14.17□□□□□ -0.14
HERC6-201ENST00000264346 ARPP21Q9UBL0 812 aaPredicted RBP14.17□□□□□ -0.14
HERC6-201ENST00000264346 MAN1B1Q9UKM7 699 aa14.17□□□□□ -0.14
HERC6-201ENST00000264346 RFX7Q2KHR2 1363 aa14.17□□□□□ -0.14
HERC6-201ENST00000264346 PPP6R2O75170 966 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms