RNA–Protein interactions for RNA: ENST00000264160.8

R3HDM1-201, Transcript of R3H domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene R3HDM1, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-201ENST00000264160 CT47A1Q5JQC4 288 aaPredicted RBP5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 MFSD14BQ5SR56 506 aa5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 SP8Q8IXZ3 490 aa5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 SMARCC2Q8TAQ2 1214 aa5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 CALML4Q96GE6 196 aa5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 TMEM87BQ96K49 555 aa5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 AGXT2Q9BYV1 514 aa5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 SPC25Q9HBM1 224 aa5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 LMBRD1Q9NUN5 540 aa5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 SWAP70Q9UH65 585 aa5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 MTMR6Q9Y217 621 aa5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 ATP6V0A2Q9Y487 856 aa5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 NAV1Q8NEY1 1877 aa5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 PRDM1O75626 825 aa5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 KIF4AO95239 1232 aa5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 ALX1Q15699 326 aa5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 RTN1Q16799 776 aa5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 USP37Q86T82 979 aa5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 CCDC150Q8NCX0 1101 aa5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 CHURC1Q8WUH1 139 aa5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 TTF2Q9UNY4 1162 aaKnown RBP5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 ATF5Q9Y2D1 282 aaPredicted RBP5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 ZMYM6O95789 1325 aa5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 PDS5AQ29RF7 1337 aaKnown RBP5.64□□□□□ -1.51
R3HDM1-201ENST00000264160 PTPDC1A2A3K4 754 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 SPDYE3A6NKU9 549 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 POTEJP0CG39 1038 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 FAM173BQ6P4H8 233 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 NSUN7Q8NE18 718 aaKnown RBP5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 SH3RF3Q8TEJ3 882 aaPredicted RBP5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 NOC3LQ8WTT2 800 aaKnown RBP5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 SCAND2PQ9GZW5 306 aaPredicted RBP5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 KCNG1Q9UIX4 513 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 HPS5Q9UPZ3 1129 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 SH2B2O14492 632 aaPredicted RBP5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 IREB2P48200 963 aaKnown RBP5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 AKNAD1Q5T1N1 836 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 CTR9Q6PD62 1173 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 PODNQ7Z5L7 613 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 SMARCE1Q969G3 411 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 TSG101Q99816 390 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 DHX36Q9H2U1 1008 aaKnown RBP5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 KCNQ5Q9NR82 932 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 ZSWIM5Q9P217 1185 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 BIN2Q9UBW5 565 aaPredicted RBP5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 GADD45BO75293 160 aaPredicted RBP5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 IL1R1P14778 569 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 GTF2IP78347 998 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 KANK3Q6NY19 840 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 GPT2Q8TD30 523 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 BRCA2P51587 3418 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 PARP1P09874 1014 aaKnown RBP5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 ME1P48163 572 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 GUCY1B3Q02153 619 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 C15orf52Q6ZUT6 534 aaKnown RBP5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 APOBEC3FQ8IUX4 373 aaKnown RBP5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 STAG1Q8WVM7 1258 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 ZNF408Q9H9D4 720 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 LY9Q9HBG7 655 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 SUGT1Q9Y2Z0 365 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 SALL1Q9NSC2 1324 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 MYH15Q9Y2K3 1946 aa5.63□□□□□ -1.51
R3HDM1-201ENST00000264160 USP17L3A6NCW0 530 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 USP17L4A6NCW7 530 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 USP17L12C9JPN9 530 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 USP17L21D6R901 530 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 USP17L8P0C7I0 530 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 MATR3P43243 847 aaKnown RBP eCLIP5.62□□□□□ -1.514e-9■■■□□ 17.6
R3HDM1-201ENST00000264160 DNM1Q05193 864 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 GRM1Q13255 1194 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 USP17L1Q7RTZ2 530 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 MICU3Q86XE3 530 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 ZNF274Q96GC6 653 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 MTFR1LQ9H019 292 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 DBNDD1Q9H9R9 158 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 DCP1AQ9NPI6 582 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 USP40Q9NVE5 1235 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 SAP30BPQ9UHR5 308 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 FIBPO43427 364 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 OSBPP22059 807 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 STYK1Q6J9G0 422 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 IGDCC4Q8TDY8 1250 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 PKNOX2Q96KN3 472 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 ZSCAN16Q9H4T2 348 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 PNMA3Q9UL41 463 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 ANGEL1Q9UNK9 670 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 UBE2Q2LH0YL09 131 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 NMT2O60551 498 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 CDC27P30260 824 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 BTDP43251 543 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 C2orf69Q8N8R5 385 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 TGFBRAP1Q8WUH2 860 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 GJB4Q9NTQ9 266 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 MROH7-TTC4A0A0A0MT08 1334 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 SSBP05455 408 aaKnown RBP eCLIP5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 FDPSP14324 419 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 CETN1Q12798 172 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 FAM47AQ5JRC9 791 aa5.62□□□□□ -1.51
R3HDM1-201ENST00000264160 CAVIN1Q6NZI2 390 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms