RNA–Protein interactions for RNA: ENST00000263665.6

CNTN3-201, Transcript of contactin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTN3, Length 4,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3-201ENST00000263665 SSH1Q8WYL5 1049 aa7.59□□□□□ -1.19
CNTN3-201ENST00000263665 MRPS27Q92552 414 aaKnown RBP7.59□□□□□ -1.19
CNTN3-201ENST00000263665 ESYT1Q9BSJ8 1104 aa7.59□□□□□ -1.19
CNTN3-201ENST00000263665 POLE3Q9NRF9 147 aa7.59□□□□□ -1.19
CNTN3-201ENST00000263665 THRAP3Q9Y2W1 955 aaKnown RBP7.59□□□□□ -1.19
CNTN3-201ENST00000263665 KDM5CP41229 1560 aa7.59□□□□□ -1.19
CNTN3-201ENST00000263665 A0A1W2PRG0 241 aa7.59□□□□□ -1.2
CNTN3-201ENST00000263665 FSBPO95073 299 aa7.59□□□□□ -1.2
CNTN3-201ENST00000263665 APOEP02649 317 aa7.59□□□□□ -1.2
CNTN3-201ENST00000263665 KRT5P13647 590 aa7.59□□□□□ -1.2
CNTN3-201ENST00000263665 DDIT3P35638 169 aa7.59□□□□□ -1.2
CNTN3-201ENST00000263665 STX3Q13277 289 aa7.59□□□□□ -1.2
CNTN3-201ENST00000263665 TWISTNBQ3B726 338 aaPredicted RBP7.59□□□□□ -1.2
CNTN3-201ENST00000263665 VPS53Q5VIR6 699 aa7.59□□□□□ -1.2
CNTN3-201ENST00000263665 VPS52Q8N1B4 723 aa7.59□□□□□ -1.2
CNTN3-201ENST00000263665 CFAP36Q96G28 342 aa7.59□□□□□ -1.2
CNTN3-201ENST00000263665 SH3GL2Q99962 352 aa7.59□□□□□ -1.2
CNTN3-201ENST00000263665 ARHGAP31Q2M1Z3 1444 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 ZNF521Q96K83 1311 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 WDR46O15213 610 aaKnown RBP7.58□□□□□ -1.2
CNTN3-201ENST00000263665 GLRX3O76003 335 aaKnown RBP7.58□□□□□ -1.2
CNTN3-201ENST00000263665 KIF5AQ12840 1032 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 KARSQ15046 597 aaKnown RBP7.58□□□□□ -1.2
CNTN3-201ENST00000263665 ZNF449Q6P9G9 518 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 TUBA3EQ6PEY2 450 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 GSDMBQ8TAX9 411 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 HNRNPLLQ8WVV9 542 aaKnown RBP7.58□□□□□ -1.2
CNTN3-201ENST00000263665 SKA1Q96BD8 255 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 HVCN1Q96D96 273 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 SPZ1Q9BXG8 430 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 ANKRD2Q9GZV1 360 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 SPINK5Q9NQ38 1064 aaPredicted RBP7.58□□□□□ -1.2
CNTN3-201ENST00000263665 SEL1LQ9UBV2 794 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 MTRF1LQ9UGC7 380 aaKnown RBP7.58□□□□□ -1.2
CNTN3-201ENST00000263665 ITM2BQ9Y287 266 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 TBKBP1A7MCY6 615 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 ARHGEF9O43307 516 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 FCHSD2O94868 740 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 KRT14P02533 472 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 KRT6AP02538 564 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 KRT6BP04259 564 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 KRT2P35908 639 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 ITGB3BPQ13352 177 aaPredicted RBP7.58□□□□□ -1.2
CNTN3-201ENST00000263665 BIRC3Q13489 604 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 CLUL1Q15846 466 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 WASHC4Q2M389 1173 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 TMEM259Q4ZIN3 620 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 FAM133BQ5BKY9 247 aaKnown RBP7.58□□□□□ -1.2
CNTN3-201ENST00000263665 PRPF40BQ6NWY9 871 aaKnown RBP7.58□□□□□ -1.2
CNTN3-201ENST00000263665 DZIP3Q86Y13 1208 aaKnown RBP7.58□□□□□ -1.2
CNTN3-201ENST00000263665 CROCCP3Q8IVE0 287 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 KIAA2013Q8IYS2 634 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 ERMNQ8TAM6 284 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 WASF1Q92558 559 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 MTRQ99707 1265 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 CD248Q9HCU0 757 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 RABL2AQ9UBK7 228 aaPredicted RBP7.58□□□□□ -1.2
CNTN3-201ENST00000263665 SMARCA5O60264 1052 aaPredicted RBP7.58□□□□□ -1.2
CNTN3-201ENST00000263665 CCDC166P0CW27 439 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 LMNB1P20700 586 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 PRR16Q569H4 304 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 PDXDC1Q6P996 788 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 SLC4A10Q6U841 1118 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 CWC27Q6UX04 472 aaKnown RBP7.58□□□□□ -1.2
CNTN3-201ENST00000263665 ZNF554Q86TJ5 538 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 ZKSCAN4Q969J2 545 aaPredicted RBP7.58□□□□□ -1.2
CNTN3-201ENST00000263665 COQ7Q99807 217 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 MTA3Q9BTC8 594 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 TMEM165Q9HC07 324 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 CCDC87Q9NVE4 849 aa7.58□□□□□ -1.2
CNTN3-201ENST00000263665 CCDC159P0C7I6 412 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 TBL3Q12788 808 aaKnown RBP7.57□□□□□ -1.2
CNTN3-201ENST00000263665 CYB5D1Q6P9G0 228 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 TMTC1Q8IUR5 882 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 PHAXQ9H814 394 aaKnown RBP7.57□□□□□ -1.2
CNTN3-201ENST00000263665 DDX21Q9NR30 783 aaKnown RBP eCLIP7.57□□□□□ -1.2
CNTN3-201ENST00000263665 EMC3Q9P0I2 261 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 IQSEC3Q9UPP2 1182 aaPredicted RBP7.57□□□□□ -1.2
CNTN3-201ENST00000263665 E9PMD0 336 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 LCA5LO95447 670 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 FESP07332 822 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 PDE6BP35913 854 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 CD151P48509 253 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 OLR1P78380 273 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 KPNB1Q14974 876 aaKnown RBP7.57□□□□□ -1.2
CNTN3-201ENST00000263665 BICDL1Q6ZP65 573 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 NSMCE1Q8WV22 266 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 CCDC138Q96M89 665 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 HAUS8Q9BT25 410 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 DCTPP1Q9H773 170 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 SPATA7Q9P0W8 599 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 PPP2R2CQ9Y2T4 447 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 FHOD1Q9Y613 1164 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 MAGEA13PA6NCF6 341 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 POTEIP0CG38 1075 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 PLA2G4AP47712 749 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 GUCY2FP51841 1108 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 TMEM154Q6P9G4 183 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 WDR60Q8WVS4 1066 aa7.57□□□□□ -1.2
CNTN3-201ENST00000263665 SYNCQ9H7C4 482 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms