RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 U2AF2P26368 475 aaKnown RBP eCLIP19.32■□□□□ 0.68
NOTCH3-201ENST00000263388 SPATS2Q86XZ4 545 aaKnown RBP19.32■□□□□ 0.68
NOTCH3-201ENST00000263388 TSPYL2Q9H2G4 693 aaPredicted RBP19.32■□□□□ 0.68
NOTCH3-201ENST00000263388 SEC24BO95487 1268 aa19.32■□□□□ 0.68
NOTCH3-201ENST00000263388 BEND3Q5T5X7 828 aa19.32■□□□□ 0.68
NOTCH3-201ENST00000263388 NOP56O00567 594 aaKnown RBP19.32■□□□□ 0.68
NOTCH3-201ENST00000263388 HELBQ8NG08 1087 aaPredicted RBP19.32■□□□□ 0.68
NOTCH3-201ENST00000263388 SGSM2O43147 1006 aa19.32■□□□□ 0.68
NOTCH3-201ENST00000263388 ITGA6P23229 1130 aa19.32■□□□□ 0.68
NOTCH3-201ENST00000263388 CASC4Q6P4E1 433 aa19.32■□□□□ 0.68
NOTCH3-201ENST00000263388 TSPYL6Q8N831 410 aa19.32■□□□□ 0.68
NOTCH3-201ENST00000263388 PPP4R1Q8TF05 950 aa19.32■□□□□ 0.68
NOTCH3-201ENST00000263388 BRD3Q15059 726 aa19.32■□□□□ 0.68
NOTCH3-201ENST00000263388 CHMP2AO43633 222 aa19.31■□□□□ 0.68
NOTCH3-201ENST00000263388 PHBP35232 272 aa19.31■□□□□ 0.68
NOTCH3-201ENST00000263388 PDE1CQ14123 709 aaPredicted RBP19.31■□□□□ 0.68
NOTCH3-201ENST00000263388 BRDTQ58F21 947 aaPredicted RBP19.31■□□□□ 0.68
NOTCH3-201ENST00000263388 RBM26Q5T8P6 1007 aaKnown RBP19.31■□□□□ 0.68
NOTCH3-201ENST00000263388 NT5C3AQ9H0P0 336 aa19.31■□□□□ 0.68
NOTCH3-201ENST00000263388 SAP30BPQ9UHR5 308 aaKnown RBP19.31■□□□□ 0.68
NOTCH3-201ENST00000263388 ADAMTS12P58397 1594 aa19.31■□□□□ 0.68
NOTCH3-201ENST00000263388 PARP10Q53GL7 1025 aa19.31■□□□□ 0.68
NOTCH3-201ENST00000263388 KRT15P19012 456 aa19.31■□□□□ 0.68
NOTCH3-201ENST00000263388 SNX14Q9Y5W7 946 aa19.31■□□□□ 0.68
NOTCH3-201ENST00000263388 SYNMO15061 1565 aa19.31■□□□□ 0.68
NOTCH3-201ENST00000263388 CEBPAP49715 358 aaPredicted RBP19.31■□□□□ 0.68
NOTCH3-201ENST00000263388 KLHL30Q0D2K2 578 aa19.31■□□□□ 0.68
NOTCH3-201ENST00000263388 DDX41Q9UJV9 622 aaKnown RBP19.31■□□□□ 0.68
NOTCH3-201ENST00000263388 P4HA1P13674 534 aa19.31■□□□□ 0.68
NOTCH3-201ENST00000263388 NSMCE1Q8WV22 266 aa19.31■□□□□ 0.68
NOTCH3-201ENST00000263388 EYA2O00167 538 aa19.31■□□□□ 0.68
NOTCH3-201ENST00000263388 KIF24Q5T7B8 1368 aa19.3■□□□□ 0.68
NOTCH3-201ENST00000263388 IRX5P78411 483 aaPredicted RBP19.3■□□□□ 0.68
NOTCH3-201ENST00000263388 ATP10BO94823 1461 aa19.3■□□□□ 0.68
NOTCH3-201ENST00000263388 HARSP12081 509 aaKnown RBP19.3■□□□□ 0.68
NOTCH3-201ENST00000263388 MTX1Q13505 466 aa19.3■□□□□ 0.68
NOTCH3-201ENST00000263388 KBTBD3Q8NAB2 608 aa19.3■□□□□ 0.68
NOTCH3-201ENST00000263388 MROH5Q6ZUA9 1318 aa19.3■□□□□ 0.68
NOTCH3-201ENST00000263388 MYCT1Q8N699 235 aa19.3■□□□□ 0.68
NOTCH3-201ENST00000263388 CEP104O60308 925 aa19.3■□□□□ 0.68
NOTCH3-201ENST00000263388 CUL4BQ13620 913 aa19.3■□□□□ 0.68
NOTCH3-201ENST00000263388 HERC4Q5GLZ8 1057 aaPredicted RBP19.3■□□□□ 0.68
NOTCH3-201ENST00000263388 REXO1Q8N1G1 1221 aaKnown RBP19.3■□□□□ 0.68
NOTCH3-201ENST00000263388 IWS1Q96ST2 819 aa19.3■□□□□ 0.68
NOTCH3-201ENST00000263388 TRIM31Q9BZY9 425 aa19.3■□□□□ 0.68
NOTCH3-201ENST00000263388 CTTNBP2NLQ9P2B4 639 aa19.3■□□□□ 0.68
NOTCH3-201ENST00000263388 OAS2P29728 719 aaKnown RBP19.3■□□□□ 0.68
NOTCH3-201ENST00000263388 ADCY7P51828 1080 aa19.3■□□□□ 0.68
NOTCH3-201ENST00000263388 ZNF526Q8TF50 670 aaPredicted RBP19.3■□□□□ 0.68
NOTCH3-201ENST00000263388 TRAPPC8Q9Y2L5 1435 aa19.3■□□□□ 0.68
NOTCH3-201ENST00000263388 AMFRQ9UKV5 643 aa19.29■□□□□ 0.68
NOTCH3-201ENST00000263388 V9GY48 417 aaPredicted RBP19.29■□□□□ 0.68
NOTCH3-201ENST00000263388 SBNO1A3KN83 1393 aa19.29■□□□□ 0.68
NOTCH3-201ENST00000263388 ANKRD20A3Q5VUR7 823 aa19.29■□□□□ 0.68
NOTCH3-201ENST00000263388 ZNF790Q6PG37 636 aa19.29■□□□□ 0.68
NOTCH3-201ENST00000263388 TEKT1Q969V4 418 aa19.29■□□□□ 0.68
NOTCH3-201ENST00000263388 RGS16O15492 202 aaPredicted RBP19.29■□□□□ 0.68
NOTCH3-201ENST00000263388 TXKP42681 527 aa19.29■□□□□ 0.68
NOTCH3-201ENST00000263388 GABPAQ06546 454 aa19.29■□□□□ 0.68
NOTCH3-201ENST00000263388 NPC1L1Q9UHC9 1359 aa19.29■□□□□ 0.68
NOTCH3-201ENST00000263388 XAGE2Q96GT9 111 aa19.29■□□□□ 0.68
NOTCH3-201ENST00000263388 NCOA5Q9HCD5 579 aaKnown RBP19.29■□□□□ 0.68
NOTCH3-201ENST00000263388 ZMYM3Q14202 1370 aa19.29■□□□□ 0.68
NOTCH3-201ENST00000263388 YWHAEP62258 255 aaKnown RBP19.29■□□□□ 0.68
NOTCH3-201ENST00000263388 HOOK2Q96ED9 719 aa19.29■□□□□ 0.68
NOTCH3-201ENST00000263388 RILPQ96NA2 401 aa19.29■□□□□ 0.68
NOTCH3-201ENST00000263388 CARD10Q9BWT7 1032 aa19.29■□□□□ 0.68
NOTCH3-201ENST00000263388 XRCC5P13010 732 aaKnown RBP19.29■□□□□ 0.68
NOTCH3-201ENST00000263388 KRT71Q3SY84 523 aa19.28■□□□□ 0.68
NOTCH3-201ENST00000263388 SNX29Q8TEQ0 813 aa19.28■□□□□ 0.68
NOTCH3-201ENST00000263388 ASXL2Q76L83 1435 aa19.28■□□□□ 0.68
NOTCH3-201ENST00000263388 CNBD1Q8NA66 436 aa19.28■□□□□ 0.68
NOTCH3-201ENST00000263388 PROCA1Q8NCQ7 364 aaPredicted RBP19.28■□□□□ 0.68
NOTCH3-201ENST00000263388 GSDMBQ8TAX9 411 aa19.28■□□□□ 0.68
NOTCH3-201ENST00000263388 IP6K1Q92551 441 aa19.28■□□□□ 0.68
NOTCH3-201ENST00000263388 PDE8AO60658 829 aa19.28■□□□□ 0.68
NOTCH3-201ENST00000263388 IGSF3O75054 1194 aa19.28■□□□□ 0.68
NOTCH3-201ENST00000263388 CDC37L1Q7L3B6 337 aa19.28■□□□□ 0.68
NOTCH3-201ENST00000263388 C2CD5Q86YS7 1000 aa19.28■□□□□ 0.68
NOTCH3-201ENST00000263388 SLC1A4P43007 532 aa19.28■□□□□ 0.68
NOTCH3-201ENST00000263388 BLMP54132 1417 aaPredicted RBP19.28■□□□□ 0.68
NOTCH3-201ENST00000263388 CPA1P15085 419 aa19.28■□□□□ 0.68
NOTCH3-201ENST00000263388 WHAMMQ8TF30 809 aa19.28■□□□□ 0.68
NOTCH3-201ENST00000263388 HAUS1Q96CS2 278 aa19.28■□□□□ 0.68
NOTCH3-201ENST00000263388 PHACTR3Q96KR7 559 aa19.28■□□□□ 0.68
NOTCH3-201ENST00000263388 GBP5Q96PP8 586 aa19.28■□□□□ 0.68
NOTCH3-201ENST00000263388 DIS3L2Q8IYB7 885 aaKnown RBP19.27■□□□□ 0.68
NOTCH3-201ENST00000263388 MRRFQ96E11 262 aaKnown RBP19.27■□□□□ 0.68
NOTCH3-201ENST00000263388 HAUS8Q9BT25 410 aa19.27■□□□□ 0.68
NOTCH3-201ENST00000263388 TYW1Q9NV66 732 aaKnown RBP19.27■□□□□ 0.68
NOTCH3-201ENST00000263388 MAGEA1P43355 309 aa19.27■□□□□ 0.68
NOTCH3-201ENST00000263388 NBPF14Q5TI25 921 aa19.27■□□□□ 0.68
NOTCH3-201ENST00000263388 PHKBQ93100 1093 aa19.27■□□□□ 0.68
NOTCH3-201ENST00000263388 RNF40O75150 1001 aa19.27■□□□□ 0.68
NOTCH3-201ENST00000263388 HIBADHP31937 336 aaKnown RBP19.27■□□□□ 0.68
NOTCH3-201ENST00000263388 KRT12Q99456 494 aa19.27■□□□□ 0.68
NOTCH3-201ENST00000263388 ARMT1Q9H993 441 aa19.27■□□□□ 0.68
NOTCH3-201ENST00000263388 GRK7Q8WTQ7 553 aa19.27■□□□□ 0.68
NOTCH3-201ENST00000263388 POLR1AO95602 1720 aaPredicted RBP19.27■□□□□ 0.68
NOTCH3-201ENST00000263388 RSAD2Q8WXG1 361 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms