RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 POTEAQ6S8J7 498 aa15.66■□□□□ 0.1
VMP1-201ENST00000262291 NOSTRINQ8IVI9 506 aa15.66■□□□□ 0.1
VMP1-201ENST00000262291 FMR1NBQ8N0W7 255 aaPredicted RBP15.66■□□□□ 0.1
VMP1-201ENST00000262291 G3V3G9 751 aa15.66■□□□□ 0.1
VMP1-201ENST00000262291 BIN1O00499 593 aa15.66■□□□□ 0.1
VMP1-201ENST00000262291 NPR1P16066 1061 aa15.66■□□□□ 0.1
VMP1-201ENST00000262291 U2AF2P26368 475 aaKnown RBP eCLIP15.66■□□□□ 0.13e-26■■■□□ 18.2
VMP1-201ENST00000262291 GRIN1Q05586 938 aa15.66■□□□□ 0.1
VMP1-201ENST00000262291 SLC39A14Q15043 492 aa15.66■□□□□ 0.1
VMP1-201ENST00000262291 SAFBQ15424 915 aaKnown RBP eCLIP15.66■□□□□ 0.1
VMP1-201ENST00000262291 DCAF8Q5TAQ9 597 aa15.66■□□□□ 0.1
VMP1-201ENST00000262291 WASF1Q92558 559 aa15.66■□□□□ 0.1
VMP1-201ENST00000262291 MAP3K14Q99558 947 aa15.66■□□□□ 0.1
VMP1-201ENST00000262291 CPVLQ9H3G5 476 aa15.66■□□□□ 0.1
VMP1-201ENST00000262291 CABP5Q9NP86 173 aa15.66■□□□□ 0.1
VMP1-201ENST00000262291 PFKFB1P16118 471 aa15.65■□□□□ 0.1
VMP1-201ENST00000262291 PTPAQ15257 358 aa15.65■□□□□ 0.1
VMP1-201ENST00000262291 DNTTIP2Q5QJE6 756 aaKnown RBP15.65■□□□□ 0.1
VMP1-201ENST00000262291 C2CD5Q86YS7 1000 aa15.65■□□□□ 0.1
VMP1-201ENST00000262291 STAG2Q8N3U4 1231 aa15.65■□□□□ 0.1
VMP1-201ENST00000262291 SPC24Q8NBT2 197 aa15.65■□□□□ 0.1
VMP1-201ENST00000262291 RGS17Q9UGC6 210 aaPredicted RBP15.65■□□□□ 0.1
VMP1-201ENST00000262291 STX8Q9UNK0 236 aa15.65■□□□□ 0.1
VMP1-201ENST00000262291 PCDHAC2Q9Y5I4 1007 aa15.65■□□□□ 0.1
VMP1-201ENST00000262291 KIAA1551Q9HCM1 1747 aa15.65■□□□□ 0.1
VMP1-201ENST00000262291 MAST2Q6P0Q8 1798 aa15.65■□□□□ 0.1
VMP1-201ENST00000262291 TSPY3P0CV98 308 aa15.65■□□□□ 0.1
VMP1-201ENST00000262291 TSPY8P0CW00 308 aa15.65■□□□□ 0.1
VMP1-201ENST00000262291 UTP14CQ5TAP6 766 aaKnown RBP15.65■□□□□ 0.1
VMP1-201ENST00000262291 CTCFLQ8NI51 663 aaPredicted RBP15.65■□□□□ 0.1
VMP1-201ENST00000262291 DAGLAQ9Y4D2 1042 aa15.65■□□□□ 0.1
VMP1-201ENST00000262291 PCDHB6Q9Y5E3 794 aa15.65■□□□□ 0.1
VMP1-201ENST00000262291 GPR75-ASB3A0A0A6YYF3 556 aa15.64■□□□□ 0.09
VMP1-201ENST00000262291 GOLGA8HP0CJ92 632 aa15.64■□□□□ 0.09
VMP1-201ENST00000262291 RHBDL3P58872 404 aa15.64■□□□□ 0.09
VMP1-201ENST00000262291 PPP4CP60510 307 aa15.64■□□□□ 0.09
VMP1-201ENST00000262291 RBM43Q6ZSC3 357 aaKnown RBP15.64■□□□□ 0.09
VMP1-201ENST00000262291 TMTC3Q6ZXV5 915 aa15.64■□□□□ 0.09
VMP1-201ENST00000262291 FAM200AQ8TCP9 573 aa15.64■□□□□ 0.09
VMP1-201ENST00000262291 KAT14Q9H8E8 782 aa15.64■□□□□ 0.09
VMP1-201ENST00000262291 FLT1P17948 1338 aa15.64■□□□□ 0.09
VMP1-201ENST00000262291 NID2Q14112 1375 aa15.64■□□□□ 0.09
VMP1-201ENST00000262291 WNT7AO00755 349 aa15.64■□□□□ 0.09
VMP1-201ENST00000262291 SHC4Q6S5L8 630 aa15.64■□□□□ 0.09
VMP1-201ENST00000262291 ZNF444Q8N0Y2 327 aaPredicted RBP15.64■□□□□ 0.09
VMP1-201ENST00000262291 MTA3Q9BTC8 594 aa15.64■□□□□ 0.09
VMP1-201ENST00000262291 TTF2Q9UNY4 1162 aaKnown RBP15.64■□□□□ 0.09
VMP1-201ENST00000262291 ZNF165P49910 485 aa15.63■□□□□ 0.09
VMP1-201ENST00000262291 UVSSAQ2YD98 709 aa15.63■□□□□ 0.09
VMP1-201ENST00000262291 MYH6P13533 1939 aa15.63■□□□□ 0.09
VMP1-201ENST00000262291 LAMB1P07942 1786 aa15.63■□□□□ 0.09
VMP1-201ENST00000262291 ZNF202O95125 648 aa15.63■□□□□ 0.09
VMP1-201ENST00000262291 RASA1P20936 1047 aa15.63■□□□□ 0.09
VMP1-201ENST00000262291 PDE6BP35913 854 aa15.63■□□□□ 0.09
VMP1-201ENST00000262291 AMOTL1Q8IY63 956 aa15.63■□□□□ 0.09
VMP1-201ENST00000262291 PNMA1Q8ND90 353 aa15.63■□□□□ 0.09
VMP1-201ENST00000262291 GPKOWQ92917 476 aaPredicted RBP eCLIP15.63■□□□□ 0.097e-23■■□□□ 12.4
VMP1-201ENST00000262291 RNF26Q9BY78 433 aaPredicted RBP15.63■□□□□ 0.09
VMP1-201ENST00000262291 CNTNAP5Q8WYK1 1306 aa15.62■□□□□ 0.09
VMP1-201ENST00000262291 CDK8P49336 464 aa15.62■□□□□ 0.09
VMP1-201ENST00000262291 HS1BP3Q53T59 392 aa15.62■□□□□ 0.09
VMP1-201ENST00000262291 CLEC10AQ8IUN9 316 aa15.62■□□□□ 0.09
VMP1-201ENST00000262291 MASTLQ96GX5 879 aa15.62■□□□□ 0.09
VMP1-201ENST00000262291 A0A1W2PQ27 194 aa15.62■□□□□ 0.09
VMP1-201ENST00000262291 A0A1W2PQ64 194 aa15.62■□□□□ 0.09
VMP1-201ENST00000262291 A0A1W2PQD8 194 aa15.62■□□□□ 0.09
VMP1-201ENST00000262291 SPDYE4A6NLX3 237 aa15.62■□□□□ 0.09
VMP1-201ENST00000262291 PCP11498 1178 aaKnown RBP15.62■□□□□ 0.09
VMP1-201ENST00000262291 CACNB3P54284 484 aa15.62■□□□□ 0.09
VMP1-201ENST00000262291 VGLL3A8MV65 326 aa15.61■□□□□ 0.09
VMP1-201ENST00000262291 PRPF3O43395 683 aaKnown RBP15.61■□□□□ 0.09
VMP1-201ENST00000262291 DDAH1O94760 285 aa15.61■□□□□ 0.09
VMP1-201ENST00000262291 EIF6P56537 245 aaKnown RBP15.61■□□□□ 0.09
VMP1-201ENST00000262291 ZNF710Q8N1W2 664 aa15.61■□□□□ 0.09
VMP1-201ENST00000262291 COA1Q9GZY4 146 aa15.61■□□□□ 0.09
VMP1-201ENST00000262291 DDX4Q9NQI0 724 aaKnown RBP15.61■□□□□ 0.09
VMP1-201ENST00000262291 COL11A2P13942 1736 aaPredicted RBP15.61■□□□□ 0.09
VMP1-201ENST00000262291 ALDH1B1P30837 517 aa15.61■□□□□ 0.09
VMP1-201ENST00000262291 EYA3Q99504 573 aa15.61■□□□□ 0.09
VMP1-201ENST00000262291 RBM28Q9NW13 759 aaKnown RBP15.61■□□□□ 0.09
VMP1-201ENST00000262291 TBC1D22AQ8WUA7 517 aa15.6■□□□□ 0.09
VMP1-201ENST00000262291 TTC12Q9H892 705 aaPredicted RBP15.6■□□□□ 0.09
VMP1-201ENST00000262291 CALM1P0DP23 149 aa15.6■□□□□ 0.09
VMP1-201ENST00000262291 CALM2P0DP24 149 aa15.6■□□□□ 0.09
VMP1-201ENST00000262291 CALM3P0DP25 149 aa15.6■□□□□ 0.09
VMP1-201ENST00000262291 CMA1P23946 247 aa15.6■□□□□ 0.09
VMP1-201ENST00000262291 SYKP43405 635 aa15.6■□□□□ 0.09
VMP1-201ENST00000262291 SLC35G1Q2M3R5 365 aa15.6■□□□□ 0.09
VMP1-201ENST00000262291 KIAA0825Q8IV33 1275 aa15.6■□□□□ 0.09
VMP1-201ENST00000262291 TMEM47Q9BQJ4 181 aa15.6■□□□□ 0.09
VMP1-201ENST00000262291 TMX4Q9H1E5 349 aaPredicted RBP15.6■□□□□ 0.09
VMP1-201ENST00000262291 FOXP1Q9H334 677 aaPredicted RBP15.6■□□□□ 0.09
VMP1-201ENST00000262291 NAV1Q8NEY1 1877 aa15.6■□□□□ 0.09
VMP1-201ENST00000262291 FAM205AQ6ZU69 1335 aa15.6■□□□□ 0.09
VMP1-201ENST00000262291 FOXN1O15353 648 aa15.59■□□□□ 0.09
VMP1-201ENST00000262291 RCAN1P53805 252 aa15.59■□□□□ 0.09
VMP1-201ENST00000262291 USP49Q70CQ1 688 aa15.59■□□□□ 0.09
VMP1-201ENST00000262291 DEFB132Q7Z7B7 95 aa15.59■□□□□ 0.09
VMP1-201ENST00000262291 PDILTQ8N807 584 aa15.59■□□□□ 0.09
VMP1-201ENST00000262291 RASGRP4Q8TDF6 673 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms