RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 SEPT2Q15019 361 aa22.23■■□□□ 1.15
CYSTM1-201ENST00000261811 MFSD6Q6ZSS7 791 aa22.23■■□□□ 1.15
CYSTM1-201ENST00000261811 ANKRD23Q86SG2 305 aa22.23■■□□□ 1.15
CYSTM1-201ENST00000261811 CCDC84Q86UT8 332 aaPredicted RBP22.23■■□□□ 1.15
CYSTM1-201ENST00000261811 PROCA1Q8NCQ7 364 aaPredicted RBP22.23■■□□□ 1.15
CYSTM1-201ENST00000261811 JAG1P78504 1218 aa22.22■■□□□ 1.15
CYSTM1-201ENST00000261811 PCNTO95613 3336 aa22.22■■□□□ 1.15
CYSTM1-201ENST00000261811 SMIM22K7EJ46 135 aa22.21■■□□□ 1.15
CYSTM1-201ENST00000261811 PRDM1O75626 825 aa22.21■■□□□ 1.15
CYSTM1-201ENST00000261811 HAND2P61296 217 aa22.21■■□□□ 1.15
CYSTM1-201ENST00000261811 ICA1Q05084 483 aa22.21■■□□□ 1.15
CYSTM1-201ENST00000261811 MTMR2Q13614 643 aa22.21■■□□□ 1.15
CYSTM1-201ENST00000261811 SH3D19Q5HYK7 790 aa22.21■■□□□ 1.15
CYSTM1-201ENST00000261811 AKNAD1Q5T1N1 836 aa22.21■■□□□ 1.15
CYSTM1-201ENST00000261811 USP17L2Q6R6M4 530 aa22.21■■□□□ 1.15
CYSTM1-201ENST00000261811 TSPY2A6NKD2 308 aa22.2■■□□□ 1.14
CYSTM1-201ENST00000261811 IGF2BP3O00425 579 aaKnown RBP eCLIP22.2■■□□□ 1.14
CYSTM1-201ENST00000261811 ORC4O43929 436 aa22.2■■□□□ 1.14
CYSTM1-201ENST00000261811 RANBP6O60518 1105 aaKnown RBP22.2■■□□□ 1.14
CYSTM1-201ENST00000261811 HMGCS2P54868 508 aa22.2■■□□□ 1.14
CYSTM1-201ENST00000261811 TAF1CQ15572 869 aaPredicted RBP22.2■■□□□ 1.14
CYSTM1-201ENST00000261811 SHROOM1Q2M3G4 852 aaPredicted RBP22.2■■□□□ 1.14
CYSTM1-201ENST00000261811 PTPN18Q99952 460 aa22.2■■□□□ 1.14
CYSTM1-201ENST00000261811 ZFYVE28Q9HCC9 887 aa22.2■■□□□ 1.14
CYSTM1-201ENST00000261811 PNMA3Q9UL41 463 aa22.2■■□□□ 1.14
CYSTM1-201ENST00000261811 SLC45A1Q9Y2W3 748 aa22.2■■□□□ 1.14
CYSTM1-201ENST00000261811 BTBD19C9JJ37 291 aa22.19■■□□□ 1.14
CYSTM1-201ENST00000261811 PDHXO00330 501 aa22.19■■□□□ 1.14
CYSTM1-201ENST00000261811 TFAP4Q01664 338 aa22.19■■□□□ 1.14
CYSTM1-201ENST00000261811 RRP12Q5JTH9 1297 aaKnown RBP22.19■■□□□ 1.14
CYSTM1-201ENST00000261811 STAG1Q8WVM7 1258 aa22.19■■□□□ 1.14
CYSTM1-201ENST00000261811 CFHR5Q9BXR6 569 aa22.19■■□□□ 1.14
CYSTM1-201ENST00000261811 KIAA1683Q9H0B3 1180 aa22.19■■□□□ 1.14
CYSTM1-201ENST00000261811 IL25Q9H293 177 aa22.19■■□□□ 1.14
CYSTM1-201ENST00000261811 CNNM2Q9H8M5 875 aa22.19■■□□□ 1.14
CYSTM1-201ENST00000261811 ANO2Q9NQ90 1003 aa22.19■■□□□ 1.14
CYSTM1-201ENST00000261811 AGTPBP1Q9UPW5 1226 aa22.19■■□□□ 1.14
CYSTM1-201ENST00000261811 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.19■■□□□ 1.14
CYSTM1-201ENST00000261811 FOXN1O15353 648 aa22.18■■□□□ 1.14
CYSTM1-201ENST00000261811 GUCY1A2P33402 732 aa22.18■■□□□ 1.14
CYSTM1-201ENST00000261811 ATP2B2Q01814 1243 aa22.18■■□□□ 1.14
CYSTM1-201ENST00000261811 FAM43AQ8N2R8 423 aa22.18■■□□□ 1.14
CYSTM1-201ENST00000261811 NEDD1Q8NHV4 660 aa22.18■■□□□ 1.14
CYSTM1-201ENST00000261811 ESR2Q92731 530 aa22.18■■□□□ 1.14
CYSTM1-201ENST00000261811 MAP4K1Q92918 833 aa22.18■■□□□ 1.14
CYSTM1-201ENST00000261811 CASP8AP2Q9UKL3 1982 aa22.17■■□□□ 1.14
CYSTM1-201ENST00000261811 FGRP09769 529 aa22.17■■□□□ 1.14
CYSTM1-201ENST00000261811 OSBPP22059 807 aa22.17■■□□□ 1.14
CYSTM1-201ENST00000261811 TRDNQ13061 729 aa22.17■■□□□ 1.14
CYSTM1-201ENST00000261811 PARK7Q99497 189 aaKnown RBP22.17■■□□□ 1.14
CYSTM1-201ENST00000261811 KRT23Q9C075 422 aa22.17■■□□□ 1.14
CYSTM1-201ENST00000261811 PLIN4Q96Q06 1357 aa22.16■■□□□ 1.14
CYSTM1-201ENST00000261811 EIF5BO60841 1220 aaKnown RBP22.16■■□□□ 1.14
CYSTM1-201ENST00000261811 PTH1RQ03431 593 aa22.16■■□□□ 1.14
CYSTM1-201ENST00000261811 GOPCQ9HD26 462 aa22.16■■□□□ 1.14
CYSTM1-201ENST00000261811 NYAP2Q9P242 653 aa22.16■■□□□ 1.14
CYSTM1-201ENST00000261811 TBC1D8O95759 1140 aa22.15■■□□□ 1.14
CYSTM1-201ENST00000261811 EEF2P13639 858 aaKnown RBP22.15■■□□□ 1.14
CYSTM1-201ENST00000261811 MOGSQ13724 837 aa22.15■■□□□ 1.14
CYSTM1-201ENST00000261811 ZYXQ15942 572 aaKnown RBP22.15■■□□□ 1.14
CYSTM1-201ENST00000261811 FAM47AQ5JRC9 791 aa22.15■■□□□ 1.14
CYSTM1-201ENST00000261811 RNF20Q5VTR2 975 aa22.15■■□□□ 1.14
CYSTM1-201ENST00000261811 LPAR1Q92633 364 aa22.15■■□□□ 1.14
CYSTM1-201ENST00000261811 C12orf42Q96LP6 360 aa22.15■■□□□ 1.14
CYSTM1-201ENST00000261811 TMX2Q9Y320 296 aa22.15■■□□□ 1.14
CYSTM1-201ENST00000261811 REC8O95072 547 aa22.14■■□□□ 1.14
CYSTM1-201ENST00000261811 TTLL1O95922 423 aa22.14■■□□□ 1.14
CYSTM1-201ENST00000261811 HSPA8P11142 646 aaKnown RBP22.14■■□□□ 1.14
CYSTM1-201ENST00000261811 CRHR2Q13324 411 aa22.14■■□□□ 1.14
CYSTM1-201ENST00000261811 CCDC178Q5BJE1 867 aa22.14■■□□□ 1.14
CYSTM1-201ENST00000261811 NOM1Q5C9Z4 860 aaKnown RBP22.14■■□□□ 1.14
CYSTM1-201ENST00000261811 GPAT2Q6NUI2 795 aa22.14■■□□□ 1.14
CYSTM1-201ENST00000261811 ACER1Q8TDN7 264 aa22.14■■□□□ 1.14
CYSTM1-201ENST00000261811 SMCR8Q8TEV9 937 aaPredicted RBP22.14■■□□□ 1.14
CYSTM1-201ENST00000261811 SYNPO2Q9UMS6 1093 aa22.14■■□□□ 1.14
CYSTM1-201ENST00000261811 RBM8AQ9Y5S9 174 aaKnown RBP22.14■■□□□ 1.14
CYSTM1-201ENST00000261811 LBX1P52954 281 aa22.13■■□□□ 1.13
CYSTM1-201ENST00000261811 IRX3P78415 501 aaPredicted RBP22.13■■□□□ 1.13
CYSTM1-201ENST00000261811 IQCA1Q86XH1 822 aa22.13■■□□□ 1.13
CYSTM1-201ENST00000261811 TBC1D10CQ8IV04 446 aa22.13■■□□□ 1.13
CYSTM1-201ENST00000261811 CEP95Q96GE4 821 aa22.13■■□□□ 1.13
CYSTM1-201ENST00000261811 LSG1Q9H089 658 aaKnown RBP22.13■■□□□ 1.13
CYSTM1-201ENST00000261811 EMILIN3Q9NT22 766 aa22.13■■□□□ 1.13
CYSTM1-201ENST00000261811 MTMR4Q9NYA4 1195 aa22.13■■□□□ 1.13
CYSTM1-201ENST00000261811 CLIP2Q9UDT6 1046 aa22.13■■□□□ 1.13
CYSTM1-201ENST00000261811 TSKSQ9UJT2 592 aa22.13■■□□□ 1.13
CYSTM1-201ENST00000261811 HOXA7P31268 230 aaPredicted RBP22.12■■□□□ 1.13
CYSTM1-201ENST00000261811 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.12■■□□□ 1.13
CYSTM1-201ENST00000261811 VCPKMTQ9H867 229 aa22.12■■□□□ 1.13
CYSTM1-201ENST00000261811 INCENPQ9NQS7 918 aa22.12■■□□□ 1.13
CYSTM1-201ENST00000261811 IGKV6D-41A0A0C4DH26 115 aa22.11■■□□□ 1.13
CYSTM1-201ENST00000261811 A0A1W2PRG0 241 aa22.11■■□□□ 1.13
CYSTM1-201ENST00000261811 USP17L15C9J2P7 530 aa22.11■■□□□ 1.13
CYSTM1-201ENST00000261811 USP17L13C9JLJ4 530 aa22.11■■□□□ 1.13
CYSTM1-201ENST00000261811 USP17L11C9JVI0 530 aa22.11■■□□□ 1.13
CYSTM1-201ENST00000261811 USP17L18D6R9N7 530 aa22.11■■□□□ 1.13
CYSTM1-201ENST00000261811 USP17L22D6RA61 530 aa22.11■■□□□ 1.13
CYSTM1-201ENST00000261811 USP17L17D6RBQ6 530 aa22.11■■□□□ 1.13
CYSTM1-201ENST00000261811 USP17L19D6RCP7 530 aa22.11■■□□□ 1.13
CYSTM1-201ENST00000261811 USP17L20D6RJB6 530 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms