RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 MYL10Q9BUA6 226 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 ATXN8OSP0DMR3 200 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 HIBADHP31937 336 aaKnown RBP15.81■□□□□ 0.12
CUX2-201ENST00000261726 KLHL30Q0D2K2 578 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 EIF4A2Q14240 407 aaKnown RBP15.81■□□□□ 0.12
CUX2-201ENST00000261726 RBBP5Q15291 538 aaKnown RBP15.81■□□□□ 0.12
CUX2-201ENST00000261726 ELF2Q15723 593 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 CNBD1Q8NA66 436 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 DNM2P50570 870 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 ADCY7P51828 1080 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 PRR16Q569H4 304 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 FAM89AQ96GI7 184 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 CABS1Q96KC9 395 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 ST7Q9NRC1 585 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 BCRP11274 1271 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 TIMM10P62072 90 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 ITKQ08881 620 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 IFRD2Q12894 506 aaPredicted RBP15.81■□□□□ 0.12
CUX2-201ENST00000261726 CALCRLQ16602 461 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 DENND2CQ68D51 928 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 OTUD7BQ6GQQ9 843 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 RUFY4Q6ZNE9 571 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 PEX26Q7Z412 305 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 TNNI1P19237 187 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 ITGA6P23229 1130 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 ANKRD20A3Q5VUR7 823 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 NSMFQ6X4W1 530 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 TACO1Q9BSH4 297 aaKnown RBP15.81■□□□□ 0.12
CUX2-201ENST00000261726 BLZF1Q9H2G9 400 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 SEPT10Q9P0V9 454 aa15.81■□□□□ 0.12
CUX2-201ENST00000261726 RNF10Q8N5U6 811 aaKnown RBP15.8■□□□□ 0.12
CUX2-201ENST00000261726 RSAD2Q8WXG1 361 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 NUP58Q9BVL2 599 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 TTC37Q6PGP7 1564 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 ZNF518AQ6AHZ1 1483 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 ZBED4O75132 1171 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 NELFBQ8WX92 580 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 LRWD1Q9UFC0 647 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 PZPP20742 1482 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 DKC1O60832 514 aaKnown RBP eCLIP15.8■□□□□ 0.12
CUX2-201ENST00000261726 CFBP00751 764 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 POTEDQ86YR6 584 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 LONRF2Q1L5Z9 754 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 RNF169Q8NCN4 708 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 GDAP1L1Q96MZ0 367 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 PLCB1Q9NQ66 1216 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 ARHGAP42A6NI28 874 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 ZBTB24O43167 697 aaPredicted RBP15.8■□□□□ 0.12
CUX2-201ENST00000261726 MAGEA1P43355 309 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 KRT81Q14533 505 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 SFMBT2Q5VUG0 894 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 TYW1BQ6NUM6 668 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 SCYL2Q6P3W7 929 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 PALM2Q8IXS6 379 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 ATP2A3Q93084 1043 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 RPS6KA1Q15418 735 aa15.8■□□□□ 0.12
CUX2-201ENST00000261726 SLF1Q9BQI6 1058 aa15.79■□□□□ 0.12
CUX2-201ENST00000261726 SLC27A2O14975 620 aa15.79■□□□□ 0.12
CUX2-201ENST00000261726 CCDC38Q502W7 563 aa15.79■□□□□ 0.12
CUX2-201ENST00000261726 CAPN12Q6ZSI9 719 aa15.79■□□□□ 0.12
CUX2-201ENST00000261726 SYCE1Q8N0S2 351 aa15.79■□□□□ 0.12
CUX2-201ENST00000261726 C17orf53Q8N3J3 647 aaPredicted RBP15.79■□□□□ 0.12
CUX2-201ENST00000261726 KRT12Q99456 494 aa15.79■□□□□ 0.12
CUX2-201ENST00000261726 hCG_1642624A0A1W2PR95 340 aa15.79■□□□□ 0.12
CUX2-201ENST00000261726 PLCB4Q15147 1175 aa15.79■□□□□ 0.12
CUX2-201ENST00000261726 STAMQ92783 540 aa15.79■□□□□ 0.12
CUX2-201ENST00000261726 SAMD9LQ8IVG5 1584 aa15.79■□□□□ 0.12
CUX2-201ENST00000261726 CDC42BPAQ5VT25 1732 aa15.79■□□□□ 0.12
CUX2-201ENST00000261726 SMIM24O75264 130 aa15.79■□□□□ 0.12
CUX2-201ENST00000261726 OATP04181 439 aa15.79■□□□□ 0.12
CUX2-201ENST00000261726 SLC1A4P43007 532 aa15.79■□□□□ 0.12
CUX2-201ENST00000261726 YARSP54577 528 aaKnown RBP15.79■□□□□ 0.12
CUX2-201ENST00000261726 METTL13Q8N6R0 699 aa15.79■□□□□ 0.12
CUX2-201ENST00000261726 TSPYL6Q8N831 410 aa15.79■□□□□ 0.12
CUX2-201ENST00000261726 PHKBQ93100 1093 aa15.79■□□□□ 0.12
CUX2-201ENST00000261726 MGEA5O60502 916 aa15.79■□□□□ 0.12
CUX2-201ENST00000261726 PAK2Q13177 524 aa15.79■□□□□ 0.12
CUX2-201ENST00000261726 PTPROQ16827 1216 aa15.79■□□□□ 0.12
CUX2-201ENST00000261726 ATL3Q6DD88 541 aa15.79■□□□□ 0.12
CUX2-201ENST00000261726 SCYL1Q96KG9 808 aa15.79■□□□□ 0.12
CUX2-201ENST00000261726 CFAP65Q6ZU64 1925 aaKnown RBP15.78■□□□□ 0.12
CUX2-201ENST00000261726 DTNBO60941 627 aa15.78■□□□□ 0.12
CUX2-201ENST00000261726 SAT1P21673 171 aa15.78■□□□□ 0.12
CUX2-201ENST00000261726 SND1Q7KZF4 910 aaKnown RBP eCLIP15.78■□□□□ 0.12
CUX2-201ENST00000261726 GGA1Q9UJY5 639 aa15.78■□□□□ 0.12
CUX2-201ENST00000261726 TOM1O60784 492 aa15.78■□□□□ 0.12
CUX2-201ENST00000261726 GUCY2FP51841 1108 aa15.78■□□□□ 0.12
CUX2-201ENST00000261726 PLEKHM2Q8IWE5 1019 aa15.78■□□□□ 0.12
CUX2-201ENST00000261726 MTX1Q13505 466 aa15.78■□□□□ 0.12
CUX2-201ENST00000261726 TPH2Q8IWU9 490 aa15.78■□□□□ 0.12
CUX2-201ENST00000261726 TMEM87BQ96K49 555 aa15.78■□□□□ 0.12
CUX2-201ENST00000261726 RAD50Q92878 1312 aa15.78■□□□□ 0.12
CUX2-201ENST00000261726 TSTA3Q13630 321 aaPredicted RBP15.78■□□□□ 0.12
CUX2-201ENST00000261726 DIS3L2Q8IYB7 885 aaKnown RBP15.78■□□□□ 0.12
CUX2-201ENST00000261726 PPP4R1Q8TF05 950 aa15.78■□□□□ 0.12
CUX2-201ENST00000261726 FLOT1O75955 427 aa15.78■□□□□ 0.12
CUX2-201ENST00000261726 CFAP221Q4G0U5 840 aa15.78■□□□□ 0.12
CUX2-201ENST00000261726 CABP7Q86V35 215 aa15.78■□□□□ 0.12
CUX2-201ENST00000261726 C14orf93Q9H972 538 aaKnown RBP15.78■□□□□ 0.12
CUX2-201ENST00000261726 A2MP01023 1474 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms