RNA–Protein interactions for RNA: ENST00000261203.7

LIN7A-201, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 989 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-201ENST00000261203 PLXNB2O15031 1838 aa11.16□□□□□ -0.62
LIN7A-201ENST00000261203 MBD4O95243 580 aa11.16□□□□□ -0.62
LIN7A-201ENST00000261203 GJA8P48165 433 aa11.16□□□□□ -0.62
LIN7A-201ENST00000261203 HERVK_113P62684 666 aa11.16□□□□□ -0.62
LIN7A-201ENST00000261203 GABPAQ06546 454 aa11.16□□□□□ -0.62
LIN7A-201ENST00000261203 RAB3GAP1Q15042 981 aa11.16□□□□□ -0.62
LIN7A-201ENST00000261203 UBE3CQ15386 1083 aa11.16□□□□□ -0.62
LIN7A-201ENST00000261203 AMOTL1Q8IY63 956 aa11.16□□□□□ -0.62
LIN7A-201ENST00000261203 GPRC5AQ8NFJ5 357 aa11.16□□□□□ -0.62
LIN7A-201ENST00000261203 SDR42E1Q8WUS8 393 aa11.16□□□□□ -0.62
LIN7A-201ENST00000261203 DDRGK1Q96HY6 314 aa11.16□□□□□ -0.62
LIN7A-201ENST00000261203 P2RX7Q99572 595 aaKnown RBP11.16□□□□□ -0.62
LIN7A-201ENST00000261203 KIAA1683Q9H0B3 1180 aa11.16□□□□□ -0.62
LIN7A-201ENST00000261203 RNF208Q9H0X6 261 aa11.16□□□□□ -0.62
LIN7A-201ENST00000261203 ARMT1Q9H993 441 aa11.16□□□□□ -0.62
LIN7A-201ENST00000261203 EMILIN3Q9NT22 766 aa11.16□□□□□ -0.62
LIN7A-201ENST00000261203 ECHDC1Q9NTX5 307 aa11.16□□□□□ -0.62
LIN7A-201ENST00000261203 SWAP70Q9UH65 585 aa11.16□□□□□ -0.62
LIN7A-201ENST00000261203 COLQQ9Y215 455 aaPredicted RBP11.16□□□□□ -0.62
LIN7A-201ENST00000261203 RANBP2P49792 3224 aaKnown RBP11.16□□□□□ -0.62
LIN7A-201ENST00000261203 USP17L15C9J2P7 530 aa11.15□□□□□ -0.62
LIN7A-201ENST00000261203 USP17L13C9JLJ4 530 aa11.15□□□□□ -0.62
LIN7A-201ENST00000261203 USP17L11C9JVI0 530 aa11.15□□□□□ -0.62
LIN7A-201ENST00000261203 USP17L18D6R9N7 530 aa11.15□□□□□ -0.62
LIN7A-201ENST00000261203 USP17L22D6RA61 530 aa11.15□□□□□ -0.62
LIN7A-201ENST00000261203 USP17L17D6RBQ6 530 aa11.15□□□□□ -0.62
LIN7A-201ENST00000261203 USP17L19D6RCP7 530 aa11.15□□□□□ -0.62
LIN7A-201ENST00000261203 USP17L20D6RJB6 530 aa11.15□□□□□ -0.62
LIN7A-201ENST00000261203 SMARCA5O60264 1052 aaPredicted RBP11.15□□□□□ -0.62
LIN7A-201ENST00000261203 INHAP05111 366 aa11.15□□□□□ -0.62
LIN7A-201ENST00000261203 ELNP15502 786 aa11.15□□□□□ -0.62
LIN7A-201ENST00000261203 MAPK4P31152 587 aa11.15□□□□□ -0.62
LIN7A-201ENST00000261203 USP17L24Q0WX57 530 aa11.15□□□□□ -0.62
LIN7A-201ENST00000261203 ERVK-9P63128 1117 aa11.14□□□□□ -0.63
LIN7A-201ENST00000261203 ERVK-24P63145 666 aa11.14□□□□□ -0.63
LIN7A-201ENST00000261203 ZYXQ15942 572 aaKnown RBP11.14□□□□□ -0.63
LIN7A-201ENST00000261203 CCAR1Q8IX12 1150 aaKnown RBP11.14□□□□□ -0.63
LIN7A-201ENST00000261203 SOCS4Q8WXH5 440 aa11.14□□□□□ -0.63
LIN7A-201ENST00000261203 SHISA4Q96DD7 197 aa11.14□□□□□ -0.63
LIN7A-201ENST00000261203 UNC93B1Q9H1C4 597 aa11.14□□□□□ -0.63
LIN7A-201ENST00000261203 CEP290O15078 2479 aa11.14□□□□□ -0.63
LIN7A-201ENST00000261203 MPHOSPH10O00566 681 aaKnown RBP11.13□□□□□ -0.63
LIN7A-201ENST00000261203 PRKAB2O43741 272 aa11.13□□□□□ -0.63
LIN7A-201ENST00000261203 HMGCRP04035 888 aa11.13□□□□□ -0.63
LIN7A-201ENST00000261203 VCAM1P19320 739 aa11.13□□□□□ -0.63
LIN7A-201ENST00000261203 GUCY1A2P33402 732 aa11.13□□□□□ -0.63
LIN7A-201ENST00000261203 CCNA1P78396 465 aa11.13□□□□□ -0.63
LIN7A-201ENST00000261203 SEPT2Q15019 361 aa11.13□□□□□ -0.63
LIN7A-201ENST00000261203 C12orf60Q5U649 245 aa11.13□□□□□ -0.63
LIN7A-201ENST00000261203 CATSPERGQ6ZRH7 1159 aa11.13□□□□□ -0.63
LIN7A-201ENST00000261203 TMEM179Q6ZVK1 233 aa11.13□□□□□ -0.63
LIN7A-201ENST00000261203 TRMT44Q8IYL2 757 aaKnown RBP11.13□□□□□ -0.63
LIN7A-201ENST00000261203 KBTBD3Q8NAB2 608 aa11.13□□□□□ -0.63
LIN7A-201ENST00000261203 ACER1Q8TDN7 264 aa11.13□□□□□ -0.63
LIN7A-201ENST00000261203 U2AF1L4Q8WU68 220 aaKnown RBP11.13□□□□□ -0.63
LIN7A-201ENST00000261203 CCDC17Q96LX7 622 aa11.13□□□□□ -0.63
LIN7A-201ENST00000261203 NUDT12Q9BQG2 462 aa11.13□□□□□ -0.63
LIN7A-201ENST00000261203 TXNRD2Q9NNW7 524 aa11.13□□□□□ -0.63
LIN7A-201ENST00000261203 RBPJLQ9UBG7 517 aa11.13□□□□□ -0.63
LIN7A-201ENST00000261203 GJD2Q9UKL4 321 aa11.13□□□□□ -0.63
LIN7A-201ENST00000261203 RABGAP1Q9Y3P9 1069 aa11.13□□□□□ -0.63
LIN7A-201ENST00000261203 A0A0C4DFX4 3053 aa11.13□□□□□ -0.63
LIN7A-201ENST00000261203 ERC2O15083 957 aa11.12□□□□□ -0.63
LIN7A-201ENST00000261203 SGPL1O95470 568 aa11.12□□□□□ -0.63
LIN7A-201ENST00000261203 ZFYP08048 801 aaPredicted RBP11.12□□□□□ -0.63
LIN7A-201ENST00000261203 CYP2D6P10635 497 aa11.12□□□□□ -0.63
LIN7A-201ENST00000261203 XRCC5P13010 732 aaKnown RBP11.12□□□□□ -0.63
LIN7A-201ENST00000261203 RRP1P56182 461 aaKnown RBP11.12□□□□□ -0.63
LIN7A-201ENST00000261203 LRRFIP1Q32MZ4 808 aaKnown RBP11.12□□□□□ -0.63
LIN7A-201ENST00000261203 SLFNL1Q499Z3 407 aa11.12□□□□□ -0.63
LIN7A-201ENST00000261203 LBX2Q6XYB7 198 aa11.12□□□□□ -0.63
LIN7A-201ENST00000261203 PAGR1Q9BTK6 254 aa11.12□□□□□ -0.63
LIN7A-201ENST00000261203 PUS7LQ9H0K6 701 aaKnown RBP11.12□□□□□ -0.63
LIN7A-201ENST00000261203 SH2D4AQ9H788 454 aa11.12□□□□□ -0.63
LIN7A-201ENST00000261203 PAK6Q9NQU5 681 aaPredicted RBP11.12□□□□□ -0.63
LIN7A-201ENST00000261203 SLC4A4Q9Y6R1 1079 aa11.12□□□□□ -0.63
LIN7A-201ENST00000261203 PARP14Q460N5 1801 aa11.12□□□□□ -0.63
LIN7A-201ENST00000261203 TTC41PQ6P2S7 1318 aa11.11□□□□□ -0.63
LIN7A-201ENST00000261203 RLFQ13129 1914 aa11.11□□□□□ -0.63
LIN7A-201ENST00000261203 USP17L12C9JPN9 530 aa11.11□□□□□ -0.63
LIN7A-201ENST00000261203 USP17L21D6R901 530 aa11.11□□□□□ -0.63
LIN7A-201ENST00000261203 GLRX3O76003 335 aaKnown RBP11.11□□□□□ -0.63
LIN7A-201ENST00000261203 FARP2O94887 1054 aaPredicted RBP11.11□□□□□ -0.63
LIN7A-201ENST00000261203 CDK8P49336 464 aa11.11□□□□□ -0.63
LIN7A-201ENST00000261203 EVX2Q03828 476 aa11.11□□□□□ -0.63
LIN7A-201ENST00000261203 GIMAP6Q6P9H5 292 aa11.11□□□□□ -0.63
LIN7A-201ENST00000261203 C16orf86Q6ZW13 317 aa11.11□□□□□ -0.63
LIN7A-201ENST00000261203 UBE2Q1Q7Z7E8 422 aa11.11□□□□□ -0.63
LIN7A-201ENST00000261203 SLC44A5Q8NCS7 719 aa11.11□□□□□ -0.63
LIN7A-201ENST00000261203 APPBP2Q92624 585 aa11.11□□□□□ -0.63
LIN7A-201ENST00000261203 LPAR1Q92633 364 aa11.11□□□□□ -0.63
LIN7A-201ENST00000261203 DYNLL2Q96FJ2 89 aa11.11□□□□□ -0.63
LIN7A-201ENST00000261203 DEFB118Q96PH6 123 aa11.11□□□□□ -0.63
LIN7A-201ENST00000261203 HTATIP2Q9BUP3 242 aa11.11□□□□□ -0.63
LIN7A-201ENST00000261203 RPAP3Q9H6T3 665 aaPredicted RBP11.11□□□□□ -0.63
LIN7A-201ENST00000261203 ARHGEF10LQ9HCE6 1279 aa11.11□□□□□ -0.63
LIN7A-201ENST00000261203 CWC22Q9HCG8 908 aaKnown RBP11.11□□□□□ -0.63
LIN7A-201ENST00000261203 ARPP21Q9UBL0 812 aaPredicted RBP11.11□□□□□ -0.63
LIN7A-201ENST00000261203 PCDHB15Q9Y5E8 787 aa11.11□□□□□ -0.63
LIN7A-201ENST00000261203 A0A0G2JMZ2 1700 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms