RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 KRT25Q7Z3Z0 450 aa13.45□□□□□ -0.26
COL8A1-201ENST00000261037 CSRNP2Q9H175 543 aa13.45□□□□□ -0.26
COL8A1-201ENST00000261037 AZI2Q9H6S1 392 aa13.45□□□□□ -0.26
COL8A1-201ENST00000261037 ZFYVE16Q7Z3T8 1539 aa13.45□□□□□ -0.26
COL8A1-201ENST00000261037 E7EWF7 191 aa13.45□□□□□ -0.26
COL8A1-201ENST00000261037 CFAP57Q96MR6 1250 aa13.45□□□□□ -0.26
COL8A1-201ENST00000261037 PPP1R2P41236 205 aa13.45□□□□□ -0.26
COL8A1-201ENST00000261037 GCKRQ14397 625 aa13.45□□□□□ -0.26
COL8A1-201ENST00000261037 KBTBD3Q8NAB2 608 aa13.45□□□□□ -0.26
COL8A1-201ENST00000261037 SLF1Q9BQI6 1058 aa13.45□□□□□ -0.26
COL8A1-201ENST00000261037 ASIC3Q9UHC3 531 aa13.45□□□□□ -0.26
COL8A1-201ENST00000261037 TYW1BQ6NUM6 668 aa13.44□□□□□ -0.26
COL8A1-201ENST00000261037 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.44□□□□□ -0.26
COL8A1-201ENST00000261037 SERTAD1Q9UHV2 236 aa13.44□□□□□ -0.26
COL8A1-201ENST00000261037 GCC2Q8IWJ2 1684 aa13.44□□□□□ -0.26
COL8A1-201ENST00000261037 MROH5Q6ZUA9 1318 aa13.44□□□□□ -0.26
COL8A1-201ENST00000261037 RIOK3O14730 519 aaKnown RBP13.44□□□□□ -0.26
COL8A1-201ENST00000261037 ATP5DP30049 168 aa13.44□□□□□ -0.26
COL8A1-201ENST00000261037 PPARAQ07869 468 aa13.44□□□□□ -0.26
COL8A1-201ENST00000261037 ELF2Q15723 593 aa13.44□□□□□ -0.26
COL8A1-201ENST00000261037 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.44□□□□□ -0.26
COL8A1-201ENST00000261037 ABCA8O94911 1581 aa13.44□□□□□ -0.26
COL8A1-201ENST00000261037 NOL3O60936 208 aaKnown RBP13.44□□□□□ -0.26
COL8A1-201ENST00000261037 CD19P15391 556 aa13.44□□□□□ -0.26
COL8A1-201ENST00000261037 PTPROQ16827 1216 aa13.44□□□□□ -0.26
COL8A1-201ENST00000261037 EAPPQ56P03 285 aaPredicted RBP13.44□□□□□ -0.26
COL8A1-201ENST00000261037 FYB2Q5VWT5 728 aa13.44□□□□□ -0.26
COL8A1-201ENST00000261037 DCUN1D2Q6PH85 259 aa13.44□□□□□ -0.26
COL8A1-201ENST00000261037 FMNL3Q8IVF7 1028 aa13.44□□□□□ -0.26
COL8A1-201ENST00000261037 VPS52Q8N1B4 723 aa13.44□□□□□ -0.26
COL8A1-201ENST00000261037 ARFGAP2Q8N6H7 521 aa13.44□□□□□ -0.26
COL8A1-201ENST00000261037 NACA2Q9H009 215 aa13.44□□□□□ -0.26
COL8A1-201ENST00000261037 STMN2Q93045 179 aa13.44□□□□□ -0.26
COL8A1-201ENST00000261037 GMNNO75496 209 aa13.43□□□□□ -0.26
COL8A1-201ENST00000261037 PRPF6O94906 941 aaKnown RBP13.43□□□□□ -0.26
COL8A1-201ENST00000261037 SLC9C1Q4G0N8 1177 aa13.43□□□□□ -0.26
COL8A1-201ENST00000261037 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.43□□□□□ -0.26
COL8A1-201ENST00000261037 USP40Q9NVE5 1235 aa13.43□□□□□ -0.26
COL8A1-201ENST00000261037 CDAN1Q8IWY9 1227 aa13.43□□□□□ -0.26
COL8A1-201ENST00000261037 LSM14BQ9BX40 385 aaKnown RBP13.43□□□□□ -0.26
COL8A1-201ENST00000261037 ANO3Q9BYT9 981 aa13.43□□□□□ -0.26
COL8A1-201ENST00000261037 FAM207AQ9NSI2 230 aaPredicted RBP13.43□□□□□ -0.26
COL8A1-201ENST00000261037 STK10O94804 968 aaKnown RBP13.43□□□□□ -0.26
COL8A1-201ENST00000261037 FAM102BQ5T8I3 360 aa13.43□□□□□ -0.26
COL8A1-201ENST00000261037 CASC4Q6P4E1 433 aa13.43□□□□□ -0.26
COL8A1-201ENST00000261037 ERO1AQ96HE7 468 aa13.43□□□□□ -0.26
COL8A1-201ENST00000261037 OGFRQ9NZT2 677 aa13.43□□□□□ -0.26
COL8A1-201ENST00000261037 ACTN4O43707 911 aaKnown RBP13.43□□□□□ -0.26
COL8A1-201ENST00000261037 KLHL30Q0D2K2 578 aa13.43□□□□□ -0.26
COL8A1-201ENST00000261037 STIM2Q9P246 746 aa13.43□□□□□ -0.26
COL8A1-201ENST00000261037 NFE2L3Q9Y4A8 694 aa13.43□□□□□ -0.26
COL8A1-201ENST00000261037 ZNF131P52739 623 aa13.42□□□□□ -0.26
COL8A1-201ENST00000261037 GTF2IP78347 998 aa13.42□□□□□ -0.26
COL8A1-201ENST00000261037 GKAP1Q5VSY0 366 aaPredicted RBP13.42□□□□□ -0.26
COL8A1-201ENST00000261037 SFMBT2Q5VUG0 894 aa13.42□□□□□ -0.26
COL8A1-201ENST00000261037 CYP2J2P51589 502 aa13.42□□□□□ -0.26
COL8A1-201ENST00000261037 LACTBP83111 547 aaPredicted RBP13.42□□□□□ -0.26
COL8A1-201ENST00000261037 CCDC110Q8TBZ0 833 aa13.42□□□□□ -0.26
COL8A1-201ENST00000261037 NLRC4Q9NPP4 1024 aa13.42□□□□□ -0.26
COL8A1-201ENST00000261037 EDC4Q6P2E9 1401 aaKnown RBP13.42□□□□□ -0.26
COL8A1-201ENST00000261037 AOX1Q06278 1338 aa13.42□□□□□ -0.26
COL8A1-201ENST00000261037 TUBB4BP68371 445 aa13.42□□□□□ -0.26
COL8A1-201ENST00000261037 PAGR1Q9BTK6 254 aa13.42□□□□□ -0.26
COL8A1-201ENST00000261037 ZMYM4Q5VZL5 1548 aa13.42□□□□□ -0.26
COL8A1-201ENST00000261037 SMCO2A6NFE2 343 aa13.42□□□□□ -0.26
COL8A1-201ENST00000261037 ADKP55263 362 aaKnown RBP13.42□□□□□ -0.26
COL8A1-201ENST00000261037 RRAGAQ7L523 313 aa13.42□□□□□ -0.26
COL8A1-201ENST00000261037 IFT20Q8IY31 132 aa13.42□□□□□ -0.26
COL8A1-201ENST00000261037 KCNQ3O43525 872 aa13.42□□□□□ -0.26
COL8A1-201ENST00000261037 BRDTQ58F21 947 aaPredicted RBP13.42□□□□□ -0.26
COL8A1-201ENST00000261037 SPOUT1Q5T280 376 aaKnown RBP13.42□□□□□ -0.26
COL8A1-201ENST00000261037 BSPRYQ5W0U4 402 aa13.42□□□□□ -0.26
COL8A1-201ENST00000261037 MLKLQ8NB16 471 aa13.42□□□□□ -0.26
COL8A1-201ENST00000261037 NUP58Q9BVL2 599 aa13.42□□□□□ -0.26
COL8A1-201ENST00000261037 TNNI1P19237 187 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 SCNN1DP51172 638 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 NAA25Q14CX7 972 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 PSMD6Q15008 389 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 HS1BP3Q53T59 392 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 CCDC105Q8IYK2 499 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 RPUSD2Q8IZ73 545 aaKnown RBP13.41□□□□□ -0.26
COL8A1-201ENST00000261037 METTL13Q8N6R0 699 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 SDR42E1Q8WUS8 393 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 IBTKQ9P2D0 1353 aaPredicted RBP13.41□□□□□ -0.26
COL8A1-201ENST00000261037 TESPA1A2RU30 521 aaPredicted RBP13.41□□□□□ -0.26
COL8A1-201ENST00000261037 GOLGA6CA6NDK9 693 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 TCP10L2B9ZVM9 353 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 PPIP5K2O43314 1243 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 GOLGA6DP0CG33 693 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 GOLGA8HP0CJ92 632 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 MAGEA1P43355 309 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 CTSWP56202 376 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 ME3Q16798 604 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 SEPT14Q6ZU15 432 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 NIM1KQ8IY84 436 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 MGARPQ8TDB4 240 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 GDAP1L1Q96MZ0 367 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 GOLGA6AQ9NYA3 693 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 TECP42680 631 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 ZNF496Q96IT1 587 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms