RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 RNF26Q9BY78 433 aaPredicted RBP25.94■■□□□ 1.74
SIX3-201ENST00000260653 GOLGA6L3A6NEY3 463 aa25.93■■□□□ 1.74
SIX3-201ENST00000260653 NEDD1Q8NHV4 660 aa25.93■■□□□ 1.74
SIX3-201ENST00000260653 MYH8P13535 1937 aa25.93■■□□□ 1.74
SIX3-201ENST00000260653 RSBN1LQ6PCB5 846 aaPredicted RBP25.93■■□□□ 1.74
SIX3-201ENST00000260653 BRAPQ7Z569 592 aa25.93■■□□□ 1.74
SIX3-201ENST00000260653 ZNF396Q96N95 335 aaPredicted RBP25.93■■□□□ 1.74
SIX3-201ENST00000260653 SERPINB13Q9UIV8 391 aa25.93■■□□□ 1.74
SIX3-201ENST00000260653 hCG_1642624A0A1W2PR95 340 aa25.92■■□□□ 1.74
SIX3-201ENST00000260653 TCP10Q12799 353 aa25.92■■□□□ 1.74
SIX3-201ENST00000260653 CFAP100Q494V2 611 aa25.92■■□□□ 1.74
SIX3-201ENST00000260653 FAM198AQ9UFP1 575 aa25.92■■□□□ 1.74
SIX3-201ENST00000260653 SRBD1Q8N5C6 995 aaKnown RBP25.91■■□□□ 1.74
SIX3-201ENST00000260653 TMEM47Q9BQJ4 181 aa25.91■■□□□ 1.74
SIX3-201ENST00000260653 FER1L6Q2WGJ9 1857 aa25.91■■□□□ 1.74
SIX3-201ENST00000260653 VIL1P09327 827 aaKnown RBP25.91■■□□□ 1.74
SIX3-201ENST00000260653 ZNF445P59923 1031 aa25.91■■□□□ 1.74
SIX3-201ENST00000260653 ATL3Q6DD88 541 aa25.91■■□□□ 1.74
SIX3-201ENST00000260653 IDI2Q9BXS1 227 aa25.91■■□□□ 1.74
SIX3-201ENST00000260653 VPS33BQ9H267 617 aa25.91■■□□□ 1.74
SIX3-201ENST00000260653 CNTNAP5Q8WYK1 1306 aa25.91■■□□□ 1.74
SIX3-201ENST00000260653 AKAP17AQ02040 695 aaKnown RBP25.9■■□□□ 1.74
SIX3-201ENST00000260653 MYSM1Q5VVJ2 828 aa25.9■■□□□ 1.74
SIX3-201ENST00000260653 NIM1KQ8IY84 436 aa25.9■■□□□ 1.74
SIX3-201ENST00000260653 CEP95Q96GE4 821 aa25.9■■□□□ 1.74
SIX3-201ENST00000260653 PGBD1Q96JS3 809 aa25.9■■□□□ 1.74
SIX3-201ENST00000260653 TDRD3Q9H7E2 651 aaKnown RBP25.9■■□□□ 1.74
SIX3-201ENST00000260653 KCNJ14Q9UNX9 436 aa25.9■■□□□ 1.74
SIX3-201ENST00000260653 V9GY48 417 aaPredicted RBP25.9■■□□□ 1.74
SIX3-201ENST00000260653 MYO3BQ8WXR4 1341 aa25.9■■□□□ 1.74
SIX3-201ENST00000260653 HLA-DOAP06340 250 aa25.9■■□□□ 1.74
SIX3-201ENST00000260653 SLURP2P0DP57 97 aa25.9■■□□□ 1.74
SIX3-201ENST00000260653 PKN1Q16512 942 aa25.9■■□□□ 1.74
SIX3-201ENST00000260653 SYAP1Q96A49 352 aaPredicted RBP25.9■■□□□ 1.74
SIX3-201ENST00000260653 ZBTB12Q9Y330 459 aaPredicted RBP25.9■■□□□ 1.74
SIX3-201ENST00000260653 SYCE3A1L190 88 aa25.89■■□□□ 1.74
SIX3-201ENST00000260653 PTGER2P43116 358 aa25.89■■□□□ 1.74
SIX3-201ENST00000260653 PRMT6Q96LA8 375 aaPredicted RBP25.89■■□□□ 1.74
SIX3-201ENST00000260653 GMLQ99445 158 aa25.89■■□□□ 1.74
SIX3-201ENST00000260653 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.89■■□□□ 1.74
SIX3-201ENST00000260653 TAOK3Q9H2K8 898 aa25.89■■□□□ 1.74
SIX3-201ENST00000260653 RCOR1Q9UKL0 485 aa25.89■■□□□ 1.74
SIX3-201ENST00000260653 ZNRF3Q9ULT6 936 aa25.89■■□□□ 1.74
SIX3-201ENST00000260653 UTRNP46939 3433 aa25.89■■□□□ 1.74
SIX3-201ENST00000260653 PRPF3O43395 683 aaKnown RBP25.89■■□□□ 1.73
SIX3-201ENST00000260653 MTMR7Q9Y216 660 aa25.89■■□□□ 1.73
SIX3-201ENST00000260653 SIPA1L1O43166 1804 aa25.89■■□□□ 1.73
SIX3-201ENST00000260653 MMP1P03956 469 aa25.88■■□□□ 1.73
SIX3-201ENST00000260653 AKR1B1P15121 316 aa25.88■■□□□ 1.73
SIX3-201ENST00000260653 KIF5BP33176 963 aa25.88■■□□□ 1.73
SIX3-201ENST00000260653 GNL2Q13823 731 aaKnown RBP25.88■■□□□ 1.73
SIX3-201ENST00000260653 SHISA4Q96DD7 197 aa25.88■■□□□ 1.73
SIX3-201ENST00000260653 SWAP70Q9UH65 585 aa25.88■■□□□ 1.73
SIX3-201ENST00000260653 CD2APQ9Y5K6 639 aa25.88■■□□□ 1.73
SIX3-201ENST00000260653 PLIN4Q96Q06 1357 aa25.88■■□□□ 1.73
SIX3-201ENST00000260653 GOLGA6L4A6NEF3 574 aa25.88■■□□□ 1.73
SIX3-201ENST00000260653 DDTLA6NHG4 134 aaPredicted RBP25.88■■□□□ 1.73
SIX3-201ENST00000260653 SHMT1P34896 483 aa25.88■■□□□ 1.73
SIX3-201ENST00000260653 U2AF2P26368 475 aaKnown RBP eCLIP25.87■■□□□ 1.73
SIX3-201ENST00000260653 STAG2Q8N3U4 1231 aa25.87■■□□□ 1.73
SIX3-201ENST00000260653 NFKBIEO00221 500 aa25.87■■□□□ 1.73
SIX3-201ENST00000260653 GRM4Q14833 912 aa25.87■■□□□ 1.73
SIX3-201ENST00000260653 SH3BP5LQ7L8J4 393 aa25.87■■□□□ 1.73
SIX3-201ENST00000260653 RASGRP2Q7LDG7 609 aa25.87■■□□□ 1.73
SIX3-201ENST00000260653 MAP3K14Q99558 947 aa25.87■■□□□ 1.73
SIX3-201ENST00000260653 BCS1LQ9Y276 419 aa25.87■■□□□ 1.73
SIX3-201ENST00000260653 CLIC4Q9Y696 253 aa25.87■■□□□ 1.73
SIX3-201ENST00000260653 EHD4Q9H223 541 aa25.86■■□□□ 1.73
SIX3-201ENST00000260653 DNAJC18Q9H819 358 aa25.86■■□□□ 1.73
SIX3-201ENST00000260653 RTEL1Q9NZ71 1219 aa25.86■■□□□ 1.73
SIX3-201ENST00000260653 VPS54Q9P1Q0 977 aa25.86■■□□□ 1.73
SIX3-201ENST00000260653 MAD2L2Q9UI95 211 aa25.86■■□□□ 1.73
SIX3-201ENST00000260653 LIG1P18858 919 aa25.86■■□□□ 1.73
SIX3-201ENST00000260653 DIS3L2Q8IYB7 885 aaKnown RBP25.86■■□□□ 1.73
SIX3-201ENST00000260653 DHX36Q9H2U1 1008 aaKnown RBP25.86■■□□□ 1.73
SIX3-201ENST00000260653 BTBD18B2RXH4 712 aa25.85■■□□□ 1.73
SIX3-201ENST00000260653 CCDC183Q5T5S1 534 aa25.85■■□□□ 1.73
SIX3-201ENST00000260653 ZSCAN29Q8IWY8 852 aaPredicted RBP25.85■■□□□ 1.73
SIX3-201ENST00000260653 NOVP48745 357 aa25.85■■□□□ 1.73
SIX3-201ENST00000260653 CLEC10AQ8IUN9 316 aa25.85■■□□□ 1.73
SIX3-201ENST00000260653 PIBF1Q8WXW3 757 aa25.85■■□□□ 1.73
SIX3-201ENST00000260653 ISY1Q9ULR0 285 aaKnown RBP25.85■■□□□ 1.73
SIX3-201ENST00000260653 SPDYE2BA6NHP3 402 aa25.84■■□□□ 1.73
SIX3-201ENST00000260653 FAM196BA6NMK8 535 aa25.84■■□□□ 1.73
SIX3-201ENST00000260653 NPM3O75607 178 aaKnown RBP25.84■■□□□ 1.73
SIX3-201ENST00000260653 SPDYE6P0CI01 402 aa25.84■■□□□ 1.73
SIX3-201ENST00000260653 CXCL9Q07325 125 aa25.84■■□□□ 1.73
SIX3-201ENST00000260653 SAFBQ15424 915 aaKnown RBP eCLIP25.84■■□□□ 1.73
SIX3-201ENST00000260653 POLR3EQ9NVU0 708 aa25.84■■□□□ 1.73
SIX3-201ENST00000260653 MTMR4Q9NYA4 1195 aa25.84■■□□□ 1.73
SIX3-201ENST00000260653 TOP1P11387 765 aaKnown RBP25.83■■□□□ 1.73
SIX3-201ENST00000260653 L1TD1Q5T7N2 865 aaKnown RBP25.83■■□□□ 1.73
SIX3-201ENST00000260653 NOSTRINQ8IVI9 506 aa25.83■■□□□ 1.73
SIX3-201ENST00000260653 OGFOD1Q8N543 542 aa25.83■■□□□ 1.73
SIX3-201ENST00000260653 LINC00301Q8NCQ3 95 aa25.83■■□□□ 1.73
SIX3-201ENST00000260653 BICD2Q8TD16 824 aa25.83■■□□□ 1.73
SIX3-201ENST00000260653 IGKV6D-41A0A0C4DH26 115 aa25.83■■□□□ 1.73
SIX3-201ENST00000260653 PI4KBQ9UBF8 816 aa25.83■■□□□ 1.73
SIX3-201ENST00000260653 HDAC9Q9UKV0 1011 aa25.83■■□□□ 1.73
SIX3-201ENST00000260653 EIF6P56537 245 aaKnown RBP25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms