RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 TEX28O15482 410 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 CD2BP2O95400 341 aaKnown RBP8.66□□□□□ -1.02
GPNMB-201ENST00000258733 USP5P45974 858 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 GUCY2FP51841 1108 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 CCDC93Q567U6 631 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 NT5DC4Q86YG4 428 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 KRI1Q8N9T8 703 aaKnown RBP8.66□□□□□ -1.02
GPNMB-201ENST00000258733 DEPTORQ8TB45 409 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 ACMSDQ8TDX5 336 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 LZICQ8WZA0 190 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 UBXN4Q92575 508 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 ACSBG1Q96GR2 724 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 SRPK1Q96SB4 655 aaKnown RBP8.66□□□□□ -1.02
GPNMB-201ENST00000258733 ZHX3Q9H4I2 956 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 RABEP2Q9H5N1 569 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 KMT5AQ9NQR1 393 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 SQORQ9Y6N5 450 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 TRIM43BA6NCK2 446 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 RAPGEF3O95398 923 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 EIF2S2P20042 333 aaKnown RBP8.66□□□□□ -1.02
GPNMB-201ENST00000258733 NFKBIAP25963 317 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 TBX4P57082 545 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 BNIP1Q12981 228 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 NUTM2DQ5VT03 806 aaPredicted RBP8.66□□□□□ -1.02
GPNMB-201ENST00000258733 PALB2Q86YC2 1186 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 CKAP2LQ8IYA6 745 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 CNNM3Q8NE01 707 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 TEKT4Q8WW24 435 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 DYDC1Q8WWB3 177 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 PPP2R3CQ969Q6 453 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 MRRFQ96E11 262 aaKnown RBP8.66□□□□□ -1.02
GPNMB-201ENST00000258733 GPR101Q96P66 508 aaPredicted RBP8.66□□□□□ -1.02
GPNMB-201ENST00000258733 CCT7Q99832 543 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 CENPHQ9H3R5 247 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 L2HGDHQ9H9P8 463 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 ARFGAP3Q9NP61 516 aa8.66□□□□□ -1.02
GPNMB-201ENST00000258733 BPIFB4P59827 614 aa8.65□□□□□ -1.02
GPNMB-201ENST00000258733 WDR66Q8TBY9 1149 aa8.65□□□□□ -1.02
GPNMB-201ENST00000258733 TTC14Q96N46 770 aa8.65□□□□□ -1.02
GPNMB-201ENST00000258733 PCMTD2Q9NV79 361 aa8.65□□□□□ -1.02
GPNMB-201ENST00000258733 TEX14Q8IWB6 1497 aa8.65□□□□□ -1.02
GPNMB-201ENST00000258733 IQGAP2Q13576 1575 aa8.65□□□□□ -1.02
GPNMB-201ENST00000258733 MAP3K4Q9Y6R4 1608 aa8.65□□□□□ -1.02
GPNMB-201ENST00000258733 AATKQ6ZMQ8 1374 aa8.65□□□□□ -1.03
GPNMB-201ENST00000258733 TDRD9Q8NDG6 1382 aaKnown RBP8.65□□□□□ -1.03
GPNMB-201ENST00000258733 HTR3EA5X5Y0 456 aa8.65□□□□□ -1.03
GPNMB-201ENST00000258733 BTBD11A6QL63 1104 aa8.65□□□□□ -1.03
GPNMB-201ENST00000258733 TTC34A8MYJ7 566 aa8.65□□□□□ -1.03
GPNMB-201ENST00000258733 TBC1D12O60347 775 aa8.65□□□□□ -1.03
GPNMB-201ENST00000258733 VIMP08670 466 aaKnown RBP8.65□□□□□ -1.03
GPNMB-201ENST00000258733 TCF3P15923 654 aa8.65□□□□□ -1.03
GPNMB-201ENST00000258733 CRY1Q16526 586 aa8.65□□□□□ -1.03
GPNMB-201ENST00000258733 IMMTQ16891 758 aaKnown RBP8.65□□□□□ -1.03
GPNMB-201ENST00000258733 UNC5DQ6UXZ4 953 aa8.65□□□□□ -1.03
GPNMB-201ENST00000258733 RAB11FIP4Q86YS3 637 aa8.65□□□□□ -1.03
GPNMB-201ENST00000258733 GRAMD2AQ8IUY3 354 aa8.65□□□□□ -1.03
GPNMB-201ENST00000258733 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.65□□□□□ -1.03
GPNMB-201ENST00000258733 CACTINQ8WUQ7 758 aaKnown RBP8.65□□□□□ -1.03
GPNMB-201ENST00000258733 ZNF75CPQ92670 426 aaPredicted RBP8.65□□□□□ -1.03
GPNMB-201ENST00000258733 OPTNQ96CV9 577 aa8.65□□□□□ -1.03
GPNMB-201ENST00000258733 IL17RAQ96F46 866 aa8.65□□□□□ -1.03
GPNMB-201ENST00000258733 ABHD8Q96I13 439 aa8.65□□□□□ -1.03
GPNMB-201ENST00000258733 STK39Q9UEW8 545 aa8.65□□□□□ -1.03
GPNMB-201ENST00000258733 NSFL1CQ9UNZ2 370 aaKnown RBP8.65□□□□□ -1.03
GPNMB-201ENST00000258733 DNMT1P26358 1616 aaKnown RBP8.65□□□□□ -1.03
GPNMB-201ENST00000258733 ATXN2Q99700 1313 aaKnown RBP8.65□□□□□ -1.03
GPNMB-201ENST00000258733 RPAP1Q9BWH6 1393 aaPredicted RBP8.64□□□□□ -1.03
GPNMB-201ENST00000258733 hCG_2014768A0A024R1R8 64 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 RASSF9O75901 435 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 PAK2Q13177 524 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 SKIDA1Q1XH10 827 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 CCDC38Q502W7 563 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 SPECC1Q5M775 1068 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 APPL2Q8NEU8 664 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 GIPC2Q8TF65 315 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 ABCG4Q9H172 646 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 VCPKMTQ9H867 229 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 ANO10Q9NW15 660 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 TMCO1Q9UM00 188 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 CROCC2H7BZ55 1655 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 MYPNQ86TC9 1320 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 SUPT3HO75486 399 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 LDHBP07195 334 aaKnown RBP8.64□□□□□ -1.03
GPNMB-201ENST00000258733 CCDC166P0CW27 439 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 BTF3P20290 206 aaKnown RBP8.64□□□□□ -1.03
GPNMB-201ENST00000258733 SYT1P21579 422 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 TSPAN7P41732 249 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 CCT5P48643 541 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 WHAMMP3Q1A5X7 153 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 CFAP157Q5JU67 520 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 CCDC158Q5M9N0 1113 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 IRGCQ6NXR0 463 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 DPH6Q7L8W6 267 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 PPFIBP1Q86W92 1011 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 ARL6IP6Q8N6S5 226 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 MAIP1Q8WWC4 291 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 SGCDQ92629 289 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 RPGRQ92834 1020 aaKnown RBP8.64□□□□□ -1.03
GPNMB-201ENST00000258733 C8orf48Q96LL4 319 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 RHBDL2Q9NX52 303 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms