RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 POLR3EQ9NVU0 708 aa16.8■□□□□ 0.28
TRAFD1-201ENST00000257604 POLR2DO15514 142 aaKnown RBP16.79■□□□□ 0.28
TRAFD1-201ENST00000257604 MMP1P03956 469 aa16.79■□□□□ 0.28
TRAFD1-201ENST00000257604 TNNT1P13805 278 aa16.79■□□□□ 0.28
TRAFD1-201ENST00000257604 PIK3AP1Q6ZUJ8 805 aa16.79■□□□□ 0.28
TRAFD1-201ENST00000257604 CEP57L1Q8IYX8 460 aa16.79■□□□□ 0.28
TRAFD1-201ENST00000257604 WDR66Q8TBY9 1149 aa16.79■□□□□ 0.28
TRAFD1-201ENST00000257604 WASF1Q92558 559 aa16.79■□□□□ 0.28
TRAFD1-201ENST00000257604 PLIN2Q99541 437 aa16.79■□□□□ 0.28
TRAFD1-201ENST00000257604 ZC3H12CQ9C0D7 883 aaKnown RBP16.79■□□□□ 0.28
TRAFD1-201ENST00000257604 TCP10Q12799 353 aa16.79■□□□□ 0.28
TRAFD1-201ENST00000257604 LONRF3Q496Y0 759 aa16.79■□□□□ 0.28
TRAFD1-201ENST00000257604 ENGASEQ8NFI3 743 aa16.79■□□□□ 0.28
TRAFD1-201ENST00000257604 RASSF8Q8NHQ8 419 aa16.79■□□□□ 0.28
TRAFD1-201ENST00000257604 KCNQ5Q9NR82 932 aa16.79■□□□□ 0.28
TRAFD1-201ENST00000257604 XBP1P17861 261 aa16.79■□□□□ 0.28
TRAFD1-201ENST00000257604 MCM7P33993 719 aa16.79■□□□□ 0.28
TRAFD1-201ENST00000257604 SRBD1Q8N5C6 995 aaKnown RBP16.79■□□□□ 0.28
TRAFD1-201ENST00000257604 ANO10Q9NW15 660 aa16.79■□□□□ 0.28
TRAFD1-201ENST00000257604 ATRNO75882 1429 aa16.78■□□□□ 0.28
TRAFD1-201ENST00000257604 USP27XA6NNY8 438 aa16.78■□□□□ 0.28
TRAFD1-201ENST00000257604 ADAMTS3O15072 1205 aa16.78■□□□□ 0.28
TRAFD1-201ENST00000257604 YEATS4O95619 227 aa16.78■□□□□ 0.28
TRAFD1-201ENST00000257604 SEC23AQ15436 765 aa16.78■□□□□ 0.28
TRAFD1-201ENST00000257604 KLHL10Q6JEL2 608 aa16.78■□□□□ 0.28
TRAFD1-201ENST00000257604 JMYQ8N9B5 988 aa16.78■□□□□ 0.28
TRAFD1-201ENST00000257604 BRIP1Q9BX63 1249 aa16.78■□□□□ 0.28
TRAFD1-201ENST00000257604 TMX4Q9H1E5 349 aaPredicted RBP16.78■□□□□ 0.28
TRAFD1-201ENST00000257604 FAM196BA6NMK8 535 aa16.78■□□□□ 0.28
TRAFD1-201ENST00000257604 MPHOSPH10O00566 681 aaKnown RBP16.78■□□□□ 0.28
TRAFD1-201ENST00000257604 AXDND1Q5T1B0 1012 aaPredicted RBP16.78■□□□□ 0.28
TRAFD1-201ENST00000257604 HEATR3Q7Z4Q2 680 aa16.78■□□□□ 0.28
TRAFD1-201ENST00000257604 DHX58Q96C10 678 aa16.78■□□□□ 0.28
TRAFD1-201ENST00000257604 WNT7AO00755 349 aa16.77■□□□□ 0.28
TRAFD1-201ENST00000257604 TOB1P50616 345 aaPredicted RBP16.77■□□□□ 0.28
TRAFD1-201ENST00000257604 CCDC144BQ3MJ40 725 aa16.77■□□□□ 0.28
TRAFD1-201ENST00000257604 COL23A1Q86Y22 540 aaPredicted RBP16.77■□□□□ 0.28
TRAFD1-201ENST00000257604 FBXL16Q8N461 479 aa16.77■□□□□ 0.28
TRAFD1-201ENST00000257604 PNMA1Q8ND90 353 aa16.77■□□□□ 0.28
TRAFD1-201ENST00000257604 TBC1D16Q8TBP0 767 aa16.77■□□□□ 0.28
TRAFD1-201ENST00000257604 KIAA1468Q9P260 1216 aa16.77■□□□□ 0.28
TRAFD1-201ENST00000257604 KCNH3Q9ULD8 1083 aa16.77■□□□□ 0.28
TRAFD1-201ENST00000257604 MYH7P12883 1935 aa16.77■□□□□ 0.28
TRAFD1-201ENST00000257604 MYH2Q9UKX2 1941 aa16.77■□□□□ 0.28
TRAFD1-201ENST00000257604 VWA3AA6NCI4 1184 aa16.77■□□□□ 0.28
TRAFD1-201ENST00000257604 NCBP1Q09161 790 aaKnown RBP16.77■□□□□ 0.28
TRAFD1-201ENST00000257604 LEMD3Q9Y2U8 911 aa16.77■□□□□ 0.28
TRAFD1-201ENST00000257604 KIAA0825Q8IV33 1275 aa16.77■□□□□ 0.27
TRAFD1-201ENST00000257604 TRERF1Q96PN7 1200 aa16.77■□□□□ 0.27
TRAFD1-201ENST00000257604 WDR19Q8NEZ3 1342 aa16.76■□□□□ 0.27
TRAFD1-201ENST00000257604 TROAPQ12815 778 aa16.76■□□□□ 0.27
TRAFD1-201ENST00000257604 ZSCAN29Q8IWY8 852 aaPredicted RBP16.76■□□□□ 0.27
TRAFD1-201ENST00000257604 EPSTI1Q96J88 318 aa16.76■□□□□ 0.27
TRAFD1-201ENST00000257604 UBA5Q9GZZ9 404 aa16.76■□□□□ 0.27
TRAFD1-201ENST00000257604 ATP8A2Q9NTI2 1148 aa16.76■□□□□ 0.27
TRAFD1-201ENST00000257604 CGNQ9P2M7 1197 aaKnown RBP16.76■□□□□ 0.27
TRAFD1-201ENST00000257604 DDX60Q8IY21 1712 aaKnown RBP16.76■□□□□ 0.27
TRAFD1-201ENST00000257604 KRI1Q8N9T8 703 aaKnown RBP16.76■□□□□ 0.27
TRAFD1-201ENST00000257604 CACTINQ8WUQ7 758 aaKnown RBP16.76■□□□□ 0.27
TRAFD1-201ENST00000257604 TTF2Q9UNY4 1162 aaKnown RBP16.76■□□□□ 0.27
TRAFD1-201ENST00000257604 ERICH4A6NGS2 130 aa16.75■□□□□ 0.27
TRAFD1-201ENST00000257604 PPEF1O14829 653 aaPredicted RBP16.75■□□□□ 0.27
TRAFD1-201ENST00000257604 USP17L2Q6R6M4 530 aa16.75■□□□□ 0.27
TRAFD1-201ENST00000257604 TDRD7Q8NHU6 1098 aaKnown RBP16.75■□□□□ 0.27
TRAFD1-201ENST00000257604 SHISA4Q96DD7 197 aa16.75■□□□□ 0.27
TRAFD1-201ENST00000257604 PCDHAC2Q9Y5I4 1007 aa16.75■□□□□ 0.27
TRAFD1-201ENST00000257604 CHRNA5P30532 468 aa16.75■□□□□ 0.27
TRAFD1-201ENST00000257604 ZNF75DP51815 510 aa16.75■□□□□ 0.27
TRAFD1-201ENST00000257604 DPP8Q6V1X1 898 aaPredicted RBP16.75■□□□□ 0.27
TRAFD1-201ENST00000257604 TRMT44Q8IYL2 757 aaKnown RBP16.75■□□□□ 0.27
TRAFD1-201ENST00000257604 ST7Q9NRC1 585 aa16.75■□□□□ 0.27
TRAFD1-201ENST00000257604 ARPP21Q9UBL0 812 aaPredicted RBP16.75■□□□□ 0.27
TRAFD1-201ENST00000257604 PPP1R1BQ9UD71 204 aaPredicted RBP16.75■□□□□ 0.27
TRAFD1-201ENST00000257604 SERTAD1Q9UHV2 236 aa16.75■□□□□ 0.27
TRAFD1-201ENST00000257604 FRMPD2Q68DX3 1309 aaPredicted RBP16.75■□□□□ 0.27
TRAFD1-201ENST00000257604 BTAF1O14981 1849 aa16.75■□□□□ 0.27
TRAFD1-201ENST00000257604 SEMA3EO15041 775 aa16.75■□□□□ 0.27
TRAFD1-201ENST00000257604 CTAGE5O15320 804 aa16.75■□□□□ 0.27
TRAFD1-201ENST00000257604 KRT2P35908 639 aa16.75■□□□□ 0.27
TRAFD1-201ENST00000257604 ANKRD7Q92527 254 aa16.75■□□□□ 0.27
TRAFD1-201ENST00000257604 CSRNP2Q9H175 543 aa16.75■□□□□ 0.27
TRAFD1-201ENST00000257604 MYH13Q9UKX3 1938 aa16.74■□□□□ 0.27
TRAFD1-201ENST00000257604 CMA1P23946 247 aa16.74■□□□□ 0.27
TRAFD1-201ENST00000257604 UTP14CQ5TAP6 766 aaKnown RBP16.74■□□□□ 0.27
TRAFD1-201ENST00000257604 LRRC47Q8N1G4 583 aaKnown RBP16.74■□□□□ 0.27
TRAFD1-201ENST00000257604 KLHL34Q8N239 644 aa16.74■□□□□ 0.27
TRAFD1-201ENST00000257604 IL17RBQ9NRM6 502 aa16.74■□□□□ 0.27
TRAFD1-201ENST00000257604 POLRMTO00411 1230 aaKnown RBP16.74■□□□□ 0.27
TRAFD1-201ENST00000257604 ATP1A3P13637 1013 aa16.74■□□□□ 0.27
TRAFD1-201ENST00000257604 STX17P56962 302 aa16.74■□□□□ 0.27
TRAFD1-201ENST00000257604 DHX8Q14562 1220 aaKnown RBP16.74■□□□□ 0.27
TRAFD1-201ENST00000257604 ATL3Q6DD88 541 aa16.74■□□□□ 0.27
TRAFD1-201ENST00000257604 NAT10Q9H0A0 1025 aaKnown RBP16.74■□□□□ 0.27
TRAFD1-201ENST00000257604 BRMS1Q9HCU9 246 aa16.74■□□□□ 0.27
TRAFD1-201ENST00000257604 TRIM75PA6NK02 468 aa16.73■□□□□ 0.27
TRAFD1-201ENST00000257604 TPM3P06753 285 aa16.73■□□□□ 0.27
TRAFD1-201ENST00000257604 PTPAQ15257 358 aa16.73■□□□□ 0.27
TRAFD1-201ENST00000257604 PKN1Q16512 942 aa16.73■□□□□ 0.27
TRAFD1-201ENST00000257604 IFNKQ9P0W0 207 aa16.73■□□□□ 0.27
TRAFD1-201ENST00000257604 PCDHA5Q9Y5H7 936 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms