RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 SEPT2Q15019 361 aa9.07□□□□□ -0.96
DSG3-201ENST00000257189 GEN1Q17RS7 908 aa9.07□□□□□ -0.96
DSG3-201ENST00000257189 TRIM68Q6AZZ1 485 aa9.07□□□□□ -0.96
DSG3-201ENST00000257189 BBOF1Q8ND07 529 aa9.07□□□□□ -0.96
DSG3-201ENST00000257189 RBSNQ9H1K0 784 aa9.07□□□□□ -0.96
DSG3-201ENST00000257189 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.07□□□□□ -0.96
DSG3-201ENST00000257189 UGGT2Q9NYU1 1516 aa9.07□□□□□ -0.96
DSG3-201ENST00000257189 SPOPO43791 374 aa9.07□□□□□ -0.96
DSG3-201ENST00000257189 SMARCA5O60264 1052 aaPredicted RBP9.07□□□□□ -0.96
DSG3-201ENST00000257189 DIXDC1Q155Q3 683 aa9.07□□□□□ -0.96
DSG3-201ENST00000257189 TRIM42Q8IWZ5 723 aa9.07□□□□□ -0.96
DSG3-201ENST00000257189 BCAS4Q8TDM0 211 aa9.07□□□□□ -0.96
DSG3-201ENST00000257189 ESR2Q92731 530 aa9.07□□□□□ -0.96
DSG3-201ENST00000257189 PSMD6Q15008 389 aa9.07□□□□□ -0.96
DSG3-201ENST00000257189 CXorf38Q8TB03 319 aa9.07□□□□□ -0.96
DSG3-201ENST00000257189 KIAA0556O60303 1618 aa9.07□□□□□ -0.96
DSG3-201ENST00000257189 PPP2R5AQ15172 486 aa9.07□□□□□ -0.96
DSG3-201ENST00000257189 CC2D2BQ6DHV5 1058 aa9.07□□□□□ -0.96
DSG3-201ENST00000257189 GRK7Q8WTQ7 553 aa9.07□□□□□ -0.96
DSG3-201ENST00000257189 DPF3Q92784 378 aa9.07□□□□□ -0.96
DSG3-201ENST00000257189 BRF1Q92994 677 aa9.07□□□□□ -0.96
DSG3-201ENST00000257189 DACT3Q96B18 629 aaPredicted RBP9.07□□□□□ -0.96
DSG3-201ENST00000257189 C6orf50Q9HD87 102 aa9.07□□□□□ -0.96
DSG3-201ENST00000257189 TYW1Q9NV66 732 aaKnown RBP9.07□□□□□ -0.96
DSG3-201ENST00000257189 MAGI3Q5TCQ9 1506 aa9.07□□□□□ -0.96
DSG3-201ENST00000257189 ARHGAP42A6NI28 874 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 CCDC169A6NNP5 214 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 TMEM110-MUSTN1A8MSY1 372 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 WDR46O15213 610 aaKnown RBP9.06□□□□□ -0.96
DSG3-201ENST00000257189 NMIQ13287 307 aaPredicted RBP9.06□□□□□ -0.96
DSG3-201ENST00000257189 SLC27A3Q5K4L6 730 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 MICU3Q86XE3 530 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 CCDC197Q8NCU1 140 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 EXOC4Q96A65 974 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 EFHD1Q9BUP0 239 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 ANGPTL2Q9UKU9 493 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 TNFAIP3P21580 790 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 ASIC2Q16515 512 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 ST13P4Q8IZP2 240 aaPredicted RBP9.06□□□□□ -0.96
DSG3-201ENST00000257189 TRIM58Q8NG06 486 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 KAT6BQ8WYB5 2073 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 SAAL1Q96ER3 474 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 PBRM1Q86U86 1689 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 TTC4O95801 387 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 EPB41P11171 864 aaKnown RBP9.06□□□□□ -0.96
DSG3-201ENST00000257189 KRT15P19012 456 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 NBPF9Q3BBW0 867 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 CNNM4Q6P4Q7 775 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 NBPF15Q8N660 670 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 TTLL6Q8N841 843 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 DHX58Q96C10 678 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 TSC22D3Q99576 134 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 STK38LQ9Y2H1 464 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 E9PMD0 336 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 NME8Q8N427 588 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 MORC4Q8TE76 937 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 LLPHQ9BRT6 129 aaKnown RBP9.06□□□□□ -0.96
DSG3-201ENST00000257189 KIFC3Q9BVG8 833 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 ANKRD2Q9GZV1 360 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 MTIF3Q9H2K0 278 aaKnown RBP9.06□□□□□ -0.96
DSG3-201ENST00000257189 SLC12A5Q9H2X9 1139 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 YY1AP1Q9H869 796 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 TTC41PQ6P2S7 1318 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 ARHGEF9O43307 516 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 MAN1A2O60476 641 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 KRT2P35908 639 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 LIG3P49916 1009 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 RPS6KA1Q15418 735 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 UAP1Q16222 522 aaPredicted RBP9.06□□□□□ -0.96
DSG3-201ENST00000257189 TRIM60Q495X7 471 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 BRINP3Q76B58 766 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 CCDC84Q86UT8 332 aaPredicted RBP9.06□□□□□ -0.96
DSG3-201ENST00000257189 LRRC43Q8N309 656 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 CFAP61Q8NHU2 1237 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 ZKSCAN3Q9BRR0 538 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 EPS15L1Q9UBC2 864 aa9.06□□□□□ -0.96
DSG3-201ENST00000257189 PIK3R4Q99570 1358 aa9.05□□□□□ -0.96
DSG3-201ENST00000257189 TSPY2A6NKD2 308 aa9.05□□□□□ -0.96
DSG3-201ENST00000257189 FANCCQ00597 558 aa9.05□□□□□ -0.96
DSG3-201ENST00000257189 TBC1D8BQ0IIM8 1120 aa9.05□□□□□ -0.96
DSG3-201ENST00000257189 PRKG1Q13976 671 aa9.05□□□□□ -0.96
DSG3-201ENST00000257189 MMS22LQ6ZRQ5 1243 aa9.05□□□□□ -0.96
DSG3-201ENST00000257189 NME9Q86XW9 330 aa9.05□□□□□ -0.96
DSG3-201ENST00000257189 RABGGTAQ92696 567 aa9.05□□□□□ -0.96
DSG3-201ENST00000257189 DCAF5Q96JK2 942 aa9.05□□□□□ -0.96
DSG3-201ENST00000257189 RILPQ96NA2 401 aa9.05□□□□□ -0.96
DSG3-201ENST00000257189 POLE3Q9NRF9 147 aa9.05□□□□□ -0.96
DSG3-201ENST00000257189 TXLNGQ9NUQ3 528 aa9.05□□□□□ -0.96
DSG3-201ENST00000257189 SAR1BQ9Y6B6 198 aa9.05□□□□□ -0.96
DSG3-201ENST00000257189 ICE2Q659A1 982 aa9.05□□□□□ -0.96
DSG3-201ENST00000257189 CCDC85AQ96PX6 553 aaPredicted RBP9.05□□□□□ -0.96
DSG3-201ENST00000257189 NOC4LQ9BVI4 516 aaKnown RBP9.05□□□□□ -0.96
DSG3-201ENST00000257189 DBF4Q9UBU7 674 aaPredicted RBP9.05□□□□□ -0.96
DSG3-201ENST00000257189 PALM3A6NDB9 673 aaPredicted RBP9.05□□□□□ -0.96
DSG3-201ENST00000257189 TRIM27P14373 513 aa9.05□□□□□ -0.96
DSG3-201ENST00000257189 TCP1P17987 556 aaKnown RBP9.05□□□□□ -0.96
DSG3-201ENST00000257189 GNAT2P19087 354 aa9.05□□□□□ -0.96
DSG3-201ENST00000257189 CTNNA1P35221 906 aaKnown RBP9.05□□□□□ -0.96
DSG3-201ENST00000257189 NBPF10Q6P3W6 841 aaKnown RBP9.05□□□□□ -0.96
DSG3-201ENST00000257189 PODNQ7Z5L7 613 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms