RNA–Protein interactions for RNA: ENST00000255304.8

USPL1-201, Transcript of ubiquitin specific peptidase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USPL1, Length 3,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1-201ENST00000255304 BMP2KQ9NSY1 1161 aaPredicted RBP8.63□□□□□ -1.03
USPL1-201ENST00000255304 ZNHIT6Q9NWK9 470 aaKnown RBP8.63□□□□□ -1.03
USPL1-201ENST00000255304 CEP131Q9UPN4 1083 aa8.63□□□□□ -1.03
USPL1-201ENST00000255304 SAMM50Q9Y512 469 aa8.63□□□□□ -1.03
USPL1-201ENST00000255304 COL5A3P25940 1745 aaPredicted RBP8.63□□□□□ -1.03
USPL1-201ENST00000255304 MAP3K15Q6ZN16 1313 aa8.63□□□□□ -1.03
USPL1-201ENST00000255304 PDIA3P30101 505 aaKnown RBP8.63□□□□□ -1.03
USPL1-201ENST00000255304 TFAP4Q01664 338 aa8.63□□□□□ -1.03
USPL1-201ENST00000255304 NR5A1Q13285 461 aa8.63□□□□□ -1.03
USPL1-201ENST00000255304 POLA2Q14181 598 aa8.63□□□□□ -1.03
USPL1-201ENST00000255304 TTC31Q49AM3 519 aaPredicted RBP8.63□□□□□ -1.03
USPL1-201ENST00000255304 ANO1Q5XXA6 986 aa8.63□□□□□ -1.03
USPL1-201ENST00000255304 FOXR1Q6PIV2 292 aa8.63□□□□□ -1.03
USPL1-201ENST00000255304 FCHSD1Q86WN1 690 aa8.63□□□□□ -1.03
USPL1-201ENST00000255304 IFNL3Q8IZI9 196 aa8.63□□□□□ -1.03
USPL1-201ENST00000255304 CARD10Q9BWT7 1032 aa8.63□□□□□ -1.03
USPL1-201ENST00000255304 PIH1D3Q9NQM4 214 aaKnown RBP8.63□□□□□ -1.03
USPL1-201ENST00000255304 DENND2AQ9ULE3 1009 aa8.63□□□□□ -1.03
USPL1-201ENST00000255304 RRP15Q9Y3B9 282 aaKnown RBP8.63□□□□□ -1.03
USPL1-201ENST00000255304 EYSQ5T1H1 3165 aa8.63□□□□□ -1.03
USPL1-201ENST00000255304 JCADQ9P266 1359 aa8.63□□□□□ -1.03
USPL1-201ENST00000255304 MCAMP43121 646 aa8.63□□□□□ -1.03
USPL1-201ENST00000255304 MNAT1P51948 309 aa8.63□□□□□ -1.03
USPL1-201ENST00000255304 LRRC8AQ8IWT6 810 aa8.63□□□□□ -1.03
USPL1-201ENST00000255304 PROM2Q8N271 834 aa8.63□□□□□ -1.03
USPL1-201ENST00000255304 GDAP1L1Q96MZ0 367 aa8.63□□□□□ -1.03
USPL1-201ENST00000255304 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.63□□□□□ -1.03
USPL1-201ENST00000255304 ARFGEF2Q9Y6D5 1785 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 ZNF202O95125 648 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 CASQ1P31415 396 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 KIF5BP33176 963 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 STAT6P42226 847 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 PLA2G4AP47712 749 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 ASIC1P78348 528 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 RASGRF1Q13972 1273 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 SMC1AQ14683 1233 aaKnown RBP8.62□□□□□ -1.03
USPL1-201ENST00000255304 CNPY4Q8N129 248 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 LCORLQ8N3X6 602 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 TTLL11Q8NHH1 800 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 TSPYL1Q9H0U9 437 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 VPS16Q9H269 839 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 ATG3Q9NT62 314 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 TCP11L1Q9NUJ3 509 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 USP8P40818 1118 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 AXDND1Q5T1B0 1012 aaPredicted RBP8.62□□□□□ -1.03
USPL1-201ENST00000255304 TXLNBQ8N3L3 684 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 LRRC4BQ9NT99 713 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 TBC1D7Q9P0N9 293 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 PUF60Q9UHX1 559 aaKnown RBP8.62□□□□□ -1.03
USPL1-201ENST00000255304 KIF24Q5T7B8 1368 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 PCCAP05165 728 aaPredicted RBP8.62□□□□□ -1.03
USPL1-201ENST00000255304 SMYD4Q8IYR2 804 aaPredicted RBP8.62□□□□□ -1.03
USPL1-201ENST00000255304 CNNM2Q9H8M5 875 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 DACH1Q9UI36 760 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 JRKLQ9Y4A0 524 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 CDH23Q9H251 3354 aa8.62□□□□□ -1.03
USPL1-201ENST00000255304 LDHCP07864 332 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 CALM1P0DP23 149 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 CALM2P0DP24 149 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 CALM3P0DP25 149 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 CASP1P29466 404 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 CACNB3P54284 484 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 EVCP57679 992 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 FAM160A1Q05DH4 1040 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 MFSD14BQ5SR56 506 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 C11orf57Q6ZUT1 292 aaPredicted RBP8.61□□□□□ -1.03
USPL1-201ENST00000255304 MAEAQ7L5Y9 396 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 DYNLL2Q96FJ2 89 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.61□□□□□ -1.03
USPL1-201ENST00000255304 TNKSO95271 1327 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 ATRNO75882 1429 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 CTAGE5O15320 804 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 CBFA2T2O43439 604 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 NDUFA8P51970 172 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 ITPK1Q13572 414 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 NECTIN1Q15223 517 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 USH1GQ495M9 461 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 DNAJC21Q5F1R6 531 aaKnown RBP8.61□□□□□ -1.03
USPL1-201ENST00000255304 MYSM1Q5VVJ2 828 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 CACNA2D4Q7Z3S7 1137 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 PGBD1Q96JS3 809 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 KCNH3Q9ULD8 1083 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 FRMPD2Q68DX3 1309 aaPredicted RBP8.61□□□□□ -1.03
USPL1-201ENST00000255304 ABCC6O95255 1503 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 TXKP42681 527 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 GRM1Q13255 1194 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 ICE2Q659A1 982 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 ZNF654Q8IZM8 581 aa8.61□□□□□ -1.03
USPL1-201ENST00000255304 LRRC47Q8N1G4 583 aaKnown RBP8.61□□□□□ -1.03
USPL1-201ENST00000255304 CCDC12Q8WUD4 166 aaPredicted RBP8.61□□□□□ -1.03
USPL1-201ENST00000255304 LY75O60449 1722 aa8.6□□□□□ -1.03
USPL1-201ENST00000255304 FAM196BA6NMK8 535 aa8.6□□□□□ -1.03
USPL1-201ENST00000255304 CHMP2AO43633 222 aa8.6□□□□□ -1.03
USPL1-201ENST00000255304 NMT2O60551 498 aa8.6□□□□□ -1.03
USPL1-201ENST00000255304 TRIM21P19474 475 aaKnown RBP8.6□□□□□ -1.03
USPL1-201ENST00000255304 PRDX5P30044 214 aa8.6□□□□□ -1.03
USPL1-201ENST00000255304 PTPROQ16827 1216 aa8.6□□□□□ -1.03
USPL1-201ENST00000255304 DYMQ7RTS9 669 aa8.6□□□□□ -1.03
USPL1-201ENST00000255304 PSMB7Q99436 277 aa8.6□□□□□ -1.03
USPL1-201ENST00000255304 PCDHA7Q9UN72 937 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms