RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 LRSAM1Q6UWE0 723 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 REXO1Q8N1G1 1221 aaKnown RBP10.4□□□□□ -0.74
PDE6A-201ENST00000255266 PKD2L1Q9P0L9 805 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 TNNQ9UQP3 1299 aa10.4□□□□□ -0.74
PDE6A-201ENST00000255266 ARID4AP29374 1257 aaPredicted RBP10.4□□□□□ -0.75
PDE6A-201ENST00000255266 SLC8A3P57103 927 aa10.4□□□□□ -0.75
PDE6A-201ENST00000255266 SNX16P57768 344 aa10.4□□□□□ -0.75
PDE6A-201ENST00000255266 MECOMQ03112 1051 aa10.4□□□□□ -0.75
PDE6A-201ENST00000255266 TTC12Q9H892 705 aaPredicted RBP10.4□□□□□ -0.75
PDE6A-201ENST00000255266 CCNT1O60563 726 aaKnown RBP10.39□□□□□ -0.75
PDE6A-201ENST00000255266 ZSCAN22P10073 491 aaPredicted RBP10.39□□□□□ -0.75
PDE6A-201ENST00000255266 MIER3Q7Z3K6 550 aa10.39□□□□□ -0.75
PDE6A-201ENST00000255266 WRNIP1Q96S55 665 aa10.39□□□□□ -0.75
PDE6A-201ENST00000255266 RUFY1Q96T51 708 aa10.39□□□□□ -0.75
PDE6A-201ENST00000255266 HERC5Q9UII4 1024 aaKnown RBP10.39□□□□□ -0.75
PDE6A-201ENST00000255266 TRPC6Q9Y210 931 aa10.39□□□□□ -0.75
PDE6A-201ENST00000255266 ADCY9O60503 1353 aa10.39□□□□□ -0.75
PDE6A-201ENST00000255266 CAVIN2O95810 425 aa10.39□□□□□ -0.75
PDE6A-201ENST00000255266 ADORA1P30542 326 aa10.39□□□□□ -0.75
PDE6A-201ENST00000255266 ITPK1Q13572 414 aa10.39□□□□□ -0.75
PDE6A-201ENST00000255266 PNMA1Q8ND90 353 aa10.39□□□□□ -0.75
PDE6A-201ENST00000255266 EAF2Q96CJ1 260 aaPredicted RBP10.39□□□□□ -0.75
PDE6A-201ENST00000255266 ZNF215Q9UL58 517 aaPredicted RBP10.39□□□□□ -0.75
PDE6A-201ENST00000255266 V9GY48 417 aaPredicted RBP10.39□□□□□ -0.75
PDE6A-201ENST00000255266 MROH7-TTC4A0A0A0MT08 1334 aa10.39□□□□□ -0.75
PDE6A-201ENST00000255266 PSMA7O14818 248 aa10.39□□□□□ -0.75
PDE6A-201ENST00000255266 SASH1O94885 1247 aa10.39□□□□□ -0.75
PDE6A-201ENST00000255266 C9orf131Q5VYM1 1079 aa10.39□□□□□ -0.75
PDE6A-201ENST00000255266 TMX3Q96JJ7 454 aa10.39□□□□□ -0.75
PDE6A-201ENST00000255266 PARK7Q99497 189 aaKnown RBP10.39□□□□□ -0.75
PDE6A-201ENST00000255266 PSTPIP2Q9H939 334 aa10.39□□□□□ -0.75
PDE6A-201ENST00000255266 FEM1BQ9UK73 627 aa10.39□□□□□ -0.75
PDE6A-201ENST00000255266 SPAG1Q07617 926 aa10.39□□□□□ -0.75
PDE6A-201ENST00000255266 ZBTB8OSQ8IWT0 167 aa10.39□□□□□ -0.75
PDE6A-201ENST00000255266 TEKT3Q9BXF9 490 aa10.39□□□□□ -0.75
PDE6A-201ENST00000255266 ZNF157P51786 506 aaPredicted RBP10.39□□□□□ -0.75
PDE6A-201ENST00000255266 MNS1Q8NEH6 495 aa10.39□□□□□ -0.75
PDE6A-201ENST00000255266 TBC1D16Q8TBP0 767 aa10.39□□□□□ -0.75
PDE6A-201ENST00000255266 TESPA1A2RU30 521 aaPredicted RBP10.38□□□□□ -0.75
PDE6A-201ENST00000255266 ABCD1P33897 745 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 TFDP1Q14186 410 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 SYDE2Q5VT97 1194 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 KLHL10Q6JEL2 608 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 CHST3Q7LGC8 479 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 RBM46Q8TBY0 533 aaKnown RBP10.38□□□□□ -0.75
PDE6A-201ENST00000255266 SDR42E1Q8WUS8 393 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 IWS1Q96ST2 819 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 SYNCQ9H7C4 482 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 ADARB2Q9NS39 739 aaKnown RBP10.38□□□□□ -0.75
PDE6A-201ENST00000255266 PPP2R3BQ9Y5P8 575 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 PTPN12Q05209 780 aaKnown RBP10.38□□□□□ -0.75
PDE6A-201ENST00000255266 SNAPC2Q13487 334 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 STX1AQ16623 288 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 ZNF654Q8IZM8 581 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 LRRC47Q8N1G4 583 aaKnown RBP10.38□□□□□ -0.75
PDE6A-201ENST00000255266 CELF1Q92879 486 aaKnown RBP10.38□□□□□ -0.75
PDE6A-201ENST00000255266 GAS7O60861 476 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 NCAPH2Q6IBW4 605 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 NECAB1Q8N987 351 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 TRIM47Q96LD4 638 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 FAM193BQ96PV7 902 aaPredicted RBP10.38□□□□□ -0.75
PDE6A-201ENST00000255266 PUF60Q9UHX1 559 aaKnown RBP10.38□□□□□ -0.75
PDE6A-201ENST00000255266 ZMYM1Q5SVZ6 1142 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 KIAA1328Q86T90 577 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 RETREG2Q8NC44 543 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 GIMAP8Q8ND71 665 aaPredicted RBP10.38□□□□□ -0.75
PDE6A-201ENST00000255266 ZNF592Q92610 1267 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 FAM227BQ96M60 508 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 CTAGE1Q96RT6 745 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 NT5C3AQ9H0P0 336 aa10.38□□□□□ -0.75
PDE6A-201ENST00000255266 E7EWF7 191 aa10.37□□□□□ -0.75
PDE6A-201ENST00000255266 CHMP2AO43633 222 aa10.37□□□□□ -0.75
PDE6A-201ENST00000255266 IQUBQ8NA54 791 aa10.37□□□□□ -0.75
PDE6A-201ENST00000255266 SLC17A8Q8NDX2 589 aa10.37□□□□□ -0.75
PDE6A-201ENST00000255266 ERCC4Q92889 916 aaPredicted RBP10.37□□□□□ -0.75
PDE6A-201ENST00000255266 USP25Q9UHP3 1055 aa10.37□□□□□ -0.75
PDE6A-201ENST00000255266 YEATS4O95619 227 aa10.37□□□□□ -0.75
PDE6A-201ENST00000255266 CALCRLQ16602 461 aa10.37□□□□□ -0.75
PDE6A-201ENST00000255266 DNM3Q9UQ16 869 aa10.37□□□□□ -0.75
PDE6A-201ENST00000255266 CEP83Q9Y592 693 aa10.37□□□□□ -0.75
PDE6A-201ENST00000255266 SMCO2A6NFE2 343 aa10.37□□□□□ -0.75
PDE6A-201ENST00000255266 CALUO43852 315 aaPredicted RBP10.37□□□□□ -0.75
PDE6A-201ENST00000255266 MRE11P49959 708 aa10.37□□□□□ -0.75
PDE6A-201ENST00000255266 MIS18BP1Q6P0N0 1132 aa10.37□□□□□ -0.75
PDE6A-201ENST00000255266 CCDC155Q8N6L0 562 aa10.37□□□□□ -0.75
PDE6A-201ENST00000255266 MRPS27Q92552 414 aaKnown RBP10.37□□□□□ -0.75
PDE6A-201ENST00000255266 RTEL1Q9NZ71 1219 aa10.37□□□□□ -0.75
PDE6A-201ENST00000255266 FRMD4BQ9Y2L6 1034 aa10.37□□□□□ -0.75
PDE6A-201ENST00000255266 STX10O60499 249 aa10.37□□□□□ -0.75
PDE6A-201ENST00000255266 GNAT1P11488 350 aa10.37□□□□□ -0.75
PDE6A-201ENST00000255266 AK2P54819 239 aa10.37□□□□□ -0.75
PDE6A-201ENST00000255266 FNBP1Q96RU3 617 aa10.37□□□□□ -0.75
PDE6A-201ENST00000255266 GDF11O95390 407 aa10.37□□□□□ -0.75
PDE6A-201ENST00000255266 VEGFAP15692 232 aaPredicted RBP10.37□□□□□ -0.75
PDE6A-201ENST00000255266 NASPP49321 788 aaPredicted RBP10.37□□□□□ -0.75
PDE6A-201ENST00000255266 MKRN3Q13064 507 aaKnown RBP10.37□□□□□ -0.75
PDE6A-201ENST00000255266 FAM212AQ96EL1 285 aa10.37□□□□□ -0.75
PDE6A-201ENST00000255266 INTS4Q96HW7 963 aaKnown RBP10.37□□□□□ -0.75
PDE6A-201ENST00000255266 TBC1D32Q96NH3 1257 aa10.37□□□□□ -0.75
PDE6A-201ENST00000255266 LRFN2Q9ULH4 789 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms