RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 PORCNQ9H237 461 aa19.51■□□□□ 0.71
CLPP-201ENST00000245816 ECHDC1Q9NTX5 307 aa19.51■□□□□ 0.71
CLPP-201ENST00000245816 MBD4O95243 580 aa19.5■□□□□ 0.71
CLPP-201ENST00000245816 SEPT2Q15019 361 aa19.5■□□□□ 0.71
CLPP-201ENST00000245816 ABCB5Q2M3G0 1257 aa19.5■□□□□ 0.71
CLPP-201ENST00000245816 USP17L2Q6R6M4 530 aa19.5■□□□□ 0.71
CLPP-201ENST00000245816 U2AF1L4Q8WU68 220 aaKnown RBP19.5■□□□□ 0.71
CLPP-201ENST00000245816 TRIM34Q9BYJ4 488 aa19.5■□□□□ 0.71
CLPP-201ENST00000245816 PUS7LQ9H0K6 701 aaKnown RBP19.5■□□□□ 0.71
CLPP-201ENST00000245816 MCM9Q9NXL9 1143 aa19.5■□□□□ 0.71
CLPP-201ENST00000245816 TMOD4Q9NZQ9 345 aa19.5■□□□□ 0.71
CLPP-201ENST00000245816 RANBP2P49792 3224 aaKnown RBP19.49■□□□□ 0.71
CLPP-201ENST00000245816 BAZ2AQ9UIF9 1905 aaKnown RBP19.49■□□□□ 0.71
CLPP-201ENST00000245816 PABPC4Q13310 644 aaKnown RBP eCLIP19.49■□□□□ 0.712e-14■■■■■ 66.2
CLPP-201ENST00000245816 RAB3GAP1Q15042 981 aa19.49■□□□□ 0.71
CLPP-201ENST00000245816 CLEC10AQ8IUN9 316 aa19.49■□□□□ 0.71
CLPP-201ENST00000245816 USP6NLQ92738 828 aa19.49■□□□□ 0.71
CLPP-201ENST00000245816 CRNKL1Q9BZJ0 848 aaKnown RBP19.49■□□□□ 0.71
CLPP-201ENST00000245816 RWDD1Q9H446 243 aaPredicted RBP19.49■□□□□ 0.71
CLPP-201ENST00000245816 PAK6Q9NQU5 681 aaPredicted RBP19.49■□□□□ 0.71
CLPP-201ENST00000245816 BIN2Q9UBW5 565 aaPredicted RBP19.49■□□□□ 0.71
CLPP-201ENST00000245816 TTC41PQ6P2S7 1318 aa19.49■□□□□ 0.71
CLPP-201ENST00000245816 SGPL1O95470 568 aa19.48■□□□□ 0.71
CLPP-201ENST00000245816 POLR3DP05423 398 aaPredicted RBP19.48■□□□□ 0.71
CLPP-201ENST00000245816 IRX6P78412 446 aaPredicted RBP19.48■□□□□ 0.71
CLPP-201ENST00000245816 IRX3P78415 501 aaPredicted RBP19.48■□□□□ 0.71
CLPP-201ENST00000245816 CATSPERGQ6ZRH7 1159 aa19.48■□□□□ 0.71
CLPP-201ENST00000245816 OTUD7AQ8TE49 926 aaPredicted RBP19.48■□□□□ 0.71
CLPP-201ENST00000245816 TRIB2Q92519 343 aa19.48■□□□□ 0.71
CLPP-201ENST00000245816 COA7Q96BR5 231 aa19.48■□□□□ 0.71
CLPP-201ENST00000245816 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.48■□□□□ 0.71
CLPP-201ENST00000245816 KIAA1683Q9H0B3 1180 aa19.48■□□□□ 0.71
CLPP-201ENST00000245816 RLFQ13129 1914 aa19.48■□□□□ 0.71
CLPP-201ENST00000245816 VCAM1P19320 739 aa19.47■□□□□ 0.71
CLPP-201ENST00000245816 MNX1P50219 401 aaPredicted RBP19.47■□□□□ 0.71
CLPP-201ENST00000245816 ERVK-9P63128 1117 aa19.47■□□□□ 0.71
CLPP-201ENST00000245816 ERVK-24P63145 666 aa19.47■□□□□ 0.71
CLPP-201ENST00000245816 UBXN2AP68543 259 aa19.47■□□□□ 0.71
CLPP-201ENST00000245816 CRISPLD2Q9H0B8 497 aa19.47■□□□□ 0.71
CLPP-201ENST00000245816 BTBD7Q9P203 1132 aa19.47■□□□□ 0.71
CLPP-201ENST00000245816 ZBTB47Q9UFB7 747 aaPredicted RBP19.47■□□□□ 0.71
CLPP-201ENST00000245816 TAOK2Q9UL54 1235 aa19.47■□□□□ 0.71
CLPP-201ENST00000245816 H0YGN5 161 aa19.46■□□□□ 0.71
CLPP-201ENST00000245816 ERC2O15083 957 aa19.46■□□□□ 0.71
CLPP-201ENST00000245816 AKR1B1P15121 316 aa19.46■□□□□ 0.71
CLPP-201ENST00000245816 UBE3CQ15386 1083 aa19.46■□□□□ 0.71
CLPP-201ENST00000245816 C12orf60Q5U649 245 aa19.46■□□□□ 0.71
CLPP-201ENST00000245816 ZSCAN25Q6NSZ9 544 aa19.46■□□□□ 0.71
CLPP-201ENST00000245816 GPRC5AQ8NFJ5 357 aa19.46■□□□□ 0.71
CLPP-201ENST00000245816 DEFB118Q96PH6 123 aa19.46■□□□□ 0.71
CLPP-201ENST00000245816 MYH7P12883 1935 aa19.46■□□□□ 0.71
CLPP-201ENST00000245816 CCL14Q16627 93 aa19.45■□□□□ 0.7
CLPP-201ENST00000245816 MORN1Q5T089 497 aa19.45■□□□□ 0.7
CLPP-201ENST00000245816 EXOC6Q8TAG9 804 aa19.45■□□□□ 0.7
CLPP-201ENST00000245816 PAGR1Q9BTK6 254 aa19.45■□□□□ 0.7
CLPP-201ENST00000245816 USP17L15C9J2P7 530 aa19.44■□□□□ 0.7
CLPP-201ENST00000245816 USP17L13C9JLJ4 530 aa19.44■□□□□ 0.7
CLPP-201ENST00000245816 USP17L12C9JPN9 530 aa19.44■□□□□ 0.7
CLPP-201ENST00000245816 USP17L11C9JVI0 530 aa19.44■□□□□ 0.7
CLPP-201ENST00000245816 USP17L21D6R901 530 aa19.44■□□□□ 0.7
CLPP-201ENST00000245816 USP17L18D6R9N7 530 aa19.44■□□□□ 0.7
CLPP-201ENST00000245816 USP17L22D6RA61 530 aa19.44■□□□□ 0.7
CLPP-201ENST00000245816 USP17L17D6RBQ6 530 aa19.44■□□□□ 0.7
CLPP-201ENST00000245816 USP17L19D6RCP7 530 aa19.44■□□□□ 0.7
CLPP-201ENST00000245816 USP17L20D6RJB6 530 aa19.44■□□□□ 0.7
CLPP-201ENST00000245816 NEFLP07196 543 aa19.44■□□□□ 0.7
CLPP-201ENST00000245816 CYP2B6P20813 491 aa19.44■□□□□ 0.7
CLPP-201ENST00000245816 USP17L24Q0WX57 530 aa19.44■□□□□ 0.7
CLPP-201ENST00000245816 HABP4Q5JVS0 413 aaKnown RBP19.44■□□□□ 0.7
CLPP-201ENST00000245816 MAP3K21Q5TCX8 1036 aa19.44■□□□□ 0.7
CLPP-201ENST00000245816 SMC5Q8IY18 1101 aa19.44■□□□□ 0.7
CLPP-201ENST00000245816 DIS3LQ8TF46 1054 aaKnown RBP19.44■□□□□ 0.7
CLPP-201ENST00000245816 OSBP2Q969R2 916 aa19.44■□□□□ 0.7
CLPP-201ENST00000245816 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.44■□□□□ 0.7
CLPP-201ENST00000245816 COLQQ9Y215 455 aaPredicted RBP19.44■□□□□ 0.7
CLPP-201ENST00000245816 SZT2Q5T011 3432 aa19.43■□□□□ 0.7
CLPP-201ENST00000245816 SPDYE16A6NNV3 312 aaPredicted RBP19.43■□□□□ 0.7
CLPP-201ENST00000245816 GLRX3O76003 335 aaKnown RBP19.43■□□□□ 0.7
CLPP-201ENST00000245816 CDK8P49336 464 aa19.43■□□□□ 0.7
CLPP-201ENST00000245816 ANKRD45Q5TZF3 282 aa19.43■□□□□ 0.7
CLPP-201ENST00000245816 CTR9Q6PD62 1173 aa19.43■□□□□ 0.7
CLPP-201ENST00000245816 GPR142Q7Z601 462 aa19.43■□□□□ 0.7
CLPP-201ENST00000245816 STRBPQ96SI9 672 aaKnown RBP19.43■□□□□ 0.7
CLPP-201ENST00000245816 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.43■□□□□ 0.72e-7■■■■□ 23.4
CLPP-201ENST00000245816 RPAP3Q9H6T3 665 aaPredicted RBP19.43■□□□□ 0.7
CLPP-201ENST00000245816 ATP8A2Q9NTI2 1148 aa19.43■□□□□ 0.7
CLPP-201ENST00000245816 ALPK3Q96L96 1907 aa19.43■□□□□ 0.7
CLPP-201ENST00000245816 GSG1L2A8MUP6 293 aa19.42■□□□□ 0.7
CLPP-201ENST00000245816 LRRFIP1Q32MZ4 808 aaKnown RBP19.42■□□□□ 0.7
CLPP-201ENST00000245816 LBX2Q6XYB7 198 aa19.42■□□□□ 0.7
CLPP-201ENST00000245816 NKX2-3Q8TAU0 364 aa19.42■□□□□ 0.7
CLPP-201ENST00000245816 FEZ1Q99689 392 aa19.42■□□□□ 0.7
CLPP-201ENST00000245816 CABP5Q9NP86 173 aa19.42■□□□□ 0.7
CLPP-201ENST00000245816 FLRT1Q9NZU1 646 aa19.42■□□□□ 0.7
CLPP-201ENST00000245816 SLC4A4Q9Y6R1 1079 aa19.42■□□□□ 0.7
CLPP-201ENST00000245816 SALL3Q9BXA9 1300 aa19.42■□□□□ 0.7
CLPP-201ENST00000245816 IGHA2P01877 340 aa19.41■□□□□ 0.7
CLPP-201ENST00000245816 HMGCRP04035 888 aa19.41■□□□□ 0.7
CLPP-201ENST00000245816 ZFYP08048 801 aaPredicted RBP19.41■□□□□ 0.7
CLPP-201ENST00000245816 C16orf86Q6ZW13 317 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms