RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 NT5C2P49902 561 aa20.83■□□□□ 0.93
KLHDC3-201ENST00000244670 GABPAQ06546 454 aa20.83■□□□□ 0.93
KLHDC3-201ENST00000244670 TCP11L1Q9NUJ3 509 aa20.83■□□□□ 0.93
KLHDC3-201ENST00000244670 SERPINB13Q9UIV8 391 aa20.83■□□□□ 0.93
KLHDC3-201ENST00000244670 ELP1O95163 1332 aa20.83■□□□□ 0.92
KLHDC3-201ENST00000244670 HLA-DOAP06340 250 aa20.82■□□□□ 0.92
KLHDC3-201ENST00000244670 KRT40Q6A162 431 aa20.82■□□□□ 0.92
KLHDC3-201ENST00000244670 PNMA1Q8ND90 353 aa20.82■□□□□ 0.92
KLHDC3-201ENST00000244670 CTCFLQ8NI51 663 aaPredicted RBP20.82■□□□□ 0.92
KLHDC3-201ENST00000244670 RBM28Q9NW13 759 aaKnown RBP20.82■□□□□ 0.92
KLHDC3-201ENST00000244670 MTMR7Q9Y216 660 aa20.82■□□□□ 0.92
KLHDC3-201ENST00000244670 UTRNP46939 3433 aa20.82■□□□□ 0.92
KLHDC3-201ENST00000244670 BAZ2BQ9UIF8 2168 aaKnown RBP20.82■□□□□ 0.92
KLHDC3-201ENST00000244670 SIPA1L1O43166 1804 aa20.82■□□□□ 0.92
KLHDC3-201ENST00000244670 CXCL9Q07325 125 aa20.82■□□□□ 0.92
KLHDC3-201ENST00000244670 NEDD1Q8NHV4 660 aa20.82■□□□□ 0.92
KLHDC3-201ENST00000244670 GMLQ99445 158 aa20.82■□□□□ 0.92
KLHDC3-201ENST00000244670 IDI2Q9BXS1 227 aa20.82■□□□□ 0.92
KLHDC3-201ENST00000244670 hCG_1642624A0A1W2PR95 340 aa20.81■□□□□ 0.92
KLHDC3-201ENST00000244670 DDTLA6NHG4 134 aaPredicted RBP20.81■□□□□ 0.92
KLHDC3-201ENST00000244670 KIF28PB7ZC32 967 aa20.81■□□□□ 0.92
KLHDC3-201ENST00000244670 RASSF7Q02833 373 aa20.81■□□□□ 0.92
KLHDC3-201ENST00000244670 CEBPZQ03701 1054 aaKnown RBP20.81■□□□□ 0.92
KLHDC3-201ENST00000244670 PPP2R5BQ15173 497 aa20.81■□□□□ 0.92
KLHDC3-201ENST00000244670 CCDC178Q5BJE1 867 aa20.81■□□□□ 0.92
KLHDC3-201ENST00000244670 ZSCAN29Q8IWY8 852 aaPredicted RBP20.81■□□□□ 0.92
KLHDC3-201ENST00000244670 JDP2Q8WYK2 163 aa20.81■□□□□ 0.92
KLHDC3-201ENST00000244670 AKR1B1P15121 316 aa20.8■□□□□ 0.92
KLHDC3-201ENST00000244670 TMTC3Q6ZXV5 915 aa20.8■□□□□ 0.92
KLHDC3-201ENST00000244670 LEO1Q8WVC0 666 aaPredicted RBP20.8■□□□□ 0.92
KLHDC3-201ENST00000244670 ANKS1AQ92625 1134 aa20.8■□□□□ 0.92
KLHDC3-201ENST00000244670 SYAP1Q96A49 352 aaPredicted RBP20.8■□□□□ 0.92
KLHDC3-201ENST00000244670 TMEM47Q9BQJ4 181 aa20.8■□□□□ 0.92
KLHDC3-201ENST00000244670 FTOQ9C0B1 505 aaKnown RBP eCLIP20.8■□□□□ 0.928e-19■■□□□ 11.4
KLHDC3-201ENST00000244670 HDAC9Q9UKV0 1011 aa20.8■□□□□ 0.92
KLHDC3-201ENST00000244670 FAM196BA6NMK8 535 aa20.8■□□□□ 0.92
KLHDC3-201ENST00000244670 DEXIO95424 95 aa20.8■□□□□ 0.92
KLHDC3-201ENST00000244670 KIF23Q02241 960 aaPredicted RBP20.8■□□□□ 0.92
KLHDC3-201ENST00000244670 TRIM29Q14134 588 aa20.8■□□□□ 0.92
KLHDC3-201ENST00000244670 LRSAM1Q6UWE0 723 aa20.8■□□□□ 0.92
KLHDC3-201ENST00000244670 SH3BP5LQ7L8J4 393 aa20.8■□□□□ 0.92
KLHDC3-201ENST00000244670 WASF1Q92558 559 aa20.8■□□□□ 0.92
KLHDC3-201ENST00000244670 CEP95Q96GE4 821 aa20.8■□□□□ 0.92
KLHDC3-201ENST00000244670 SPATA32Q96LK8 384 aa20.8■□□□□ 0.92
KLHDC3-201ENST00000244670 SCAND2PQ9GZW5 306 aaPredicted RBP20.8■□□□□ 0.92
KLHDC3-201ENST00000244670 SHMT1P34896 483 aa20.79■□□□□ 0.92
KLHDC3-201ENST00000244670 FUT2Q10981 343 aa20.79■□□□□ 0.92
KLHDC3-201ENST00000244670 OGFOD1Q8N543 542 aa20.79■□□□□ 0.92
KLHDC3-201ENST00000244670 SWAP70Q9UH65 585 aa20.79■□□□□ 0.92
KLHDC3-201ENST00000244670 CLRN2A0PK11 232 aa20.78■□□□□ 0.92
KLHDC3-201ENST00000244670 SPDYE2BA6NHP3 402 aa20.78■□□□□ 0.92
KLHDC3-201ENST00000244670 SPDYE6P0CI01 402 aa20.78■□□□□ 0.92
KLHDC3-201ENST00000244670 AKAP17AQ02040 695 aaKnown RBP20.78■□□□□ 0.92
KLHDC3-201ENST00000244670 RASGRP2Q7LDG7 609 aa20.78■□□□□ 0.92
KLHDC3-201ENST00000244670 SRBD1Q8N5C6 995 aaKnown RBP20.78■□□□□ 0.92
KLHDC3-201ENST00000244670 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.78■□□□□ 0.92
KLHDC3-201ENST00000244670 RNF26Q9BY78 433 aaPredicted RBP20.78■□□□□ 0.92
KLHDC3-201ENST00000244670 DLGAP5Q15398 846 aa20.78■□□□□ 0.92
KLHDC3-201ENST00000244670 CIAPIN1Q6FI81 312 aa20.78■□□□□ 0.92
KLHDC3-201ENST00000244670 CLEC10AQ8IUN9 316 aa20.78■□□□□ 0.92
KLHDC3-201ENST00000244670 DHX36Q9H2U1 1008 aaKnown RBP20.78■□□□□ 0.92
KLHDC3-201ENST00000244670 DNAJC18Q9H819 358 aa20.78■□□□□ 0.92
KLHDC3-201ENST00000244670 KCNJ14Q9UNX9 436 aa20.78■□□□□ 0.92
KLHDC3-201ENST00000244670 V9GY48 417 aaPredicted RBP20.78■□□□□ 0.92
KLHDC3-201ENST00000244670 CNTNAP5Q8WYK1 1306 aa20.78■□□□□ 0.92
KLHDC3-201ENST00000244670 ARFGEF1Q9Y6D6 1849 aa20.77■□□□□ 0.92
KLHDC3-201ENST00000244670 CCDC183Q5T5S1 534 aa20.77■□□□□ 0.92
KLHDC3-201ENST00000244670 STAG2Q8N3U4 1231 aa20.77■□□□□ 0.92
KLHDC3-201ENST00000244670 AGBL3Q8NEM8 1001 aa20.77■□□□□ 0.92
KLHDC3-201ENST00000244670 PIBF1Q8WXW3 757 aa20.77■□□□□ 0.92
KLHDC3-201ENST00000244670 USP28Q96RU2 1077 aa20.77■□□□□ 0.92
KLHDC3-201ENST00000244670 PLIN4Q96Q06 1357 aa20.77■□□□□ 0.91
KLHDC3-201ENST00000244670 TCP10L2B9ZVM9 353 aa20.76■□□□□ 0.91
KLHDC3-201ENST00000244670 KIF5BP33176 963 aa20.76■□□□□ 0.91
KLHDC3-201ENST00000244670 EIF6P56537 245 aaKnown RBP20.76■□□□□ 0.91
KLHDC3-201ENST00000244670 GNL2Q13823 731 aaKnown RBP20.76■□□□□ 0.91
KLHDC3-201ENST00000244670 RBSNQ9H1K0 784 aa20.76■□□□□ 0.91
KLHDC3-201ENST00000244670 EHD4Q9H223 541 aa20.76■□□□□ 0.91
KLHDC3-201ENST00000244670 RTN4Q9NQC3 1192 aaKnown RBP20.76■□□□□ 0.91
KLHDC3-201ENST00000244670 CFAP45Q9UL16 551 aa20.76■□□□□ 0.91
KLHDC3-201ENST00000244670 SHTN1A0MZ66 631 aa20.76■□□□□ 0.91
KLHDC3-201ENST00000244670 MPHOSPH10O00566 681 aaKnown RBP20.76■□□□□ 0.91
KLHDC3-201ENST00000244670 PRPF3O43395 683 aaKnown RBP20.76■□□□□ 0.91
KLHDC3-201ENST00000244670 PRELPP51888 382 aa20.76■□□□□ 0.91
KLHDC3-201ENST00000244670 GRM4Q14833 912 aa20.76■□□□□ 0.91
KLHDC3-201ENST00000244670 PKN1Q16512 942 aa20.76■□□□□ 0.91
KLHDC3-201ENST00000244670 ZNF396Q96N95 335 aaPredicted RBP20.76■□□□□ 0.91
KLHDC3-201ENST00000244670 SPON1Q9HCB6 807 aa20.76■□□□□ 0.91
KLHDC3-201ENST00000244670 TMOD2Q9NZR1 351 aa20.76■□□□□ 0.91
KLHDC3-201ENST00000244670 PI4KBQ9UBF8 816 aa20.76■□□□□ 0.91
KLHDC3-201ENST00000244670 NPM3O75607 178 aaKnown RBP20.75■□□□□ 0.91
KLHDC3-201ENST00000244670 BRAPQ7Z569 592 aa20.75■□□□□ 0.91
KLHDC3-201ENST00000244670 PGBD1Q96JS3 809 aa20.75■□□□□ 0.91
KLHDC3-201ENST00000244670 ZNF70Q9UC06 446 aaPredicted RBP20.75■□□□□ 0.91
KLHDC3-201ENST00000244670 MAD2L2Q9UI95 211 aa20.75■□□□□ 0.91
KLHDC3-201ENST00000244670 MYSM1Q5VVJ2 828 aa20.74■□□□□ 0.91
KLHDC3-201ENST00000244670 RGS22Q8NE09 1264 aa20.74■□□□□ 0.91
KLHDC3-201ENST00000244670 SHISA4Q96DD7 197 aa20.74■□□□□ 0.91
KLHDC3-201ENST00000244670 TRIM34Q9BYJ4 488 aa20.74■□□□□ 0.91
KLHDC3-201ENST00000244670 MTMR4Q9NYA4 1195 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms