RNA–Protein interactions for RNA: ENST00000229854.11

MCM3-201, Transcript of minichromosome maintenance complex component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCM3, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-201ENST00000229854 CNGA4Q8IV77 575 aa11.64□□□□□ -0.55
MCM3-201ENST00000229854 PRPF38AQ8NAV1 312 aaKnown RBP11.64□□□□□ -0.55
MCM3-201ENST00000229854 MED15Q96RN5 788 aa11.64□□□□□ -0.55
MCM3-201ENST00000229854 COL5A2P05997 1499 aaPredicted RBP11.64□□□□□ -0.55
MCM3-201ENST00000229854 STRCQ7RTU9 1775 aa11.64□□□□□ -0.55
MCM3-201ENST00000229854 ECM2O94769 699 aaPredicted RBP11.64□□□□□ -0.55
MCM3-201ENST00000229854 MYBL2P10244 700 aa11.64□□□□□ -0.55
MCM3-201ENST00000229854 SATB1Q01826 763 aa11.64□□□□□ -0.55
MCM3-201ENST00000229854 SND1Q7KZF4 910 aaKnown RBP eCLIP11.64□□□□□ -0.556e-7■□□□□ 10.6
MCM3-201ENST00000229854 DHX37Q8IY37 1157 aaKnown RBP11.64□□□□□ -0.55
MCM3-201ENST00000229854 N4BP2L2Q92802 583 aaPredicted RBP11.64□□□□□ -0.55
MCM3-201ENST00000229854 PALLDQ8WX93 1383 aa11.64□□□□□ -0.55
MCM3-201ENST00000229854 NHSL1Q5SYE7 1610 aa11.64□□□□□ -0.55
MCM3-201ENST00000229854 MYL6BP14649 208 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 CDC25AP30304 524 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 ARHGAP25P42331 645 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 AMPD2Q01433 879 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 PDCLQ13371 301 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 TRIM29Q14134 588 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 NEDD9Q14511 834 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 RALYLQ86SE5 291 aaKnown RBP11.63□□□□□ -0.55
MCM3-201ENST00000229854 TMTC1Q8IUR5 882 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 KRI1Q8N9T8 703 aaKnown RBP11.63□□□□□ -0.55
MCM3-201ENST00000229854 PHKBQ93100 1093 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 NBPF3Q9H094 633 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 POLD4Q9HCU8 107 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 HELLSQ9NRZ9 838 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 NLRP2Q9NX02 1062 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 HPS5Q9UPZ3 1129 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 GPTP24298 496 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 ERVK-24P63145 666 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 FOXO4P98177 505 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 FKBP15Q5T1M5 1219 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 LMOD2Q6P5Q4 547 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 B4GALNT4Q76KP1 1039 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 PLBD2Q8NHP8 589 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 SH3TC1Q8TE82 1336 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 CARD10Q9BWT7 1032 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 PAG1Q9NWQ8 432 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 SAR1BQ9Y6B6 198 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 ITGB4P16144 1822 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 ZC3H4Q9UPT8 1303 aaKnown RBP11.63□□□□□ -0.55
MCM3-201ENST00000229854 GYPCP04921 128 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 ELF1P32519 619 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 ATP1A2P50993 1020 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 PLCD1P51178 756 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 MDM2Q00987 491 aaPredicted RBP11.63□□□□□ -0.55
MCM3-201ENST00000229854 LRCH2Q5VUJ6 765 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 DDX17Q92841 729 aaKnown RBP11.63□□□□□ -0.55
MCM3-201ENST00000229854 RUFY1Q96T51 708 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 TFR2Q9UP52 801 aa11.63□□□□□ -0.55
MCM3-201ENST00000229854 WNK3Q9BYP7 1800 aa11.62□□□□□ -0.55
MCM3-201ENST00000229854 PATL2C9JE40 543 aaKnown RBP11.62□□□□□ -0.55
MCM3-201ENST00000229854 A1BGP04217 495 aa11.62□□□□□ -0.55
MCM3-201ENST00000229854 ATP1A1P05023 1023 aaKnown RBP11.62□□□□□ -0.55
MCM3-201ENST00000229854 GRIN1Q05586 938 aa11.62□□□□□ -0.55
MCM3-201ENST00000229854 ACTN3Q08043 901 aaPredicted RBP11.62□□□□□ -0.55
MCM3-201ENST00000229854 MORC3Q14149 939 aa11.62□□□□□ -0.55
MCM3-201ENST00000229854 CEP57Q86XR8 500 aa11.62□□□□□ -0.55
MCM3-201ENST00000229854 MAP3K14Q99558 947 aa11.62□□□□□ -0.55
MCM3-201ENST00000229854 MYO1AQ9UBC5 1043 aa11.62□□□□□ -0.55
MCM3-201ENST00000229854 PLCH1Q4KWH8 1693 aa11.62□□□□□ -0.55
MCM3-201ENST00000229854 H7C1W4 665 aa11.62□□□□□ -0.55
MCM3-201ENST00000229854 N4BP3O15049 544 aa11.62□□□□□ -0.55
MCM3-201ENST00000229854 NEBLO76041 1014 aa11.62□□□□□ -0.55
MCM3-201ENST00000229854 AFMP43652 599 aa11.62□□□□□ -0.55
MCM3-201ENST00000229854 NKX1-1Q15270 411 aaPredicted RBP11.62□□□□□ -0.55
MCM3-201ENST00000229854 WASHC4Q2M389 1173 aa11.62□□□□□ -0.55
MCM3-201ENST00000229854 CYP26C1Q6V0L0 522 aa11.62□□□□□ -0.55
MCM3-201ENST00000229854 CCNI2Q6ZMN8 369 aaPredicted RBP11.62□□□□□ -0.55
MCM3-201ENST00000229854 ZKSCAN4Q969J2 545 aaPredicted RBP11.62□□□□□ -0.55
MCM3-201ENST00000229854 GRIN2DO15399 1336 aa11.61□□□□□ -0.55
MCM3-201ENST00000229854 MAST3O60307 1309 aa11.61□□□□□ -0.55
MCM3-201ENST00000229854 SYNRGQ9UMZ2 1314 aa11.61□□□□□ -0.55
MCM3-201ENST00000229854 NBPF26B4DH59 902 aa11.61□□□□□ -0.55
MCM3-201ENST00000229854 CHUKO15111 745 aa11.61□□□□□ -0.55
MCM3-201ENST00000229854 MRPS25P82663 173 aaKnown RBP11.61□□□□□ -0.55
MCM3-201ENST00000229854 IMMTQ16891 758 aaKnown RBP11.61□□□□□ -0.55
MCM3-201ENST00000229854 NBPF14Q5TI25 921 aa11.61□□□□□ -0.55
MCM3-201ENST00000229854 NBPF10Q6P3W6 841 aaKnown RBP11.61□□□□□ -0.55
MCM3-201ENST00000229854 TRAPPC11Q7Z392 1133 aa11.61□□□□□ -0.55
MCM3-201ENST00000229854 SMYD4Q8IYR2 804 aaPredicted RBP11.61□□□□□ -0.55
MCM3-201ENST00000229854 NBPF15Q8N660 670 aa11.61□□□□□ -0.55
MCM3-201ENST00000229854 VPS16Q9H269 839 aa11.61□□□□□ -0.55
MCM3-201ENST00000229854 VEZTQ9HBM0 779 aa11.61□□□□□ -0.55
MCM3-201ENST00000229854 ADD3Q9UEY8 706 aaKnown RBP11.61□□□□□ -0.55
MCM3-201ENST00000229854 ODF2LQ9ULJ1 636 aa11.61□□□□□ -0.55
MCM3-201ENST00000229854 MYH3P11055 1940 aa11.61□□□□□ -0.55
MCM3-201ENST00000229854 C2orf54Q08AI8 447 aa11.61□□□□□ -0.55
MCM3-201ENST00000229854 HSP90AB3PQ58FF7 597 aa11.61□□□□□ -0.55
MCM3-201ENST00000229854 ZMYM1Q5SVZ6 1142 aa11.61□□□□□ -0.55
MCM3-201ENST00000229854 SPATA1Q5VX52 437 aa11.61□□□□□ -0.55
MCM3-201ENST00000229854 CCDC70Q6NSX1 233 aa11.61□□□□□ -0.55
MCM3-201ENST00000229854 RRP36Q96EU6 259 aaKnown RBP11.61□□□□□ -0.55
MCM3-201ENST00000229854 ARAP2Q8WZ64 1704 aa11.61□□□□□ -0.55
MCM3-201ENST00000229854 M0R2C6 588 aa11.61□□□□□ -0.55
MCM3-201ENST00000229854 MEFVO15553 781 aaPredicted RBP11.61□□□□□ -0.55
MCM3-201ENST00000229854 ATF3P18847 181 aa11.61□□□□□ -0.55
MCM3-201ENST00000229854 CASP1P29466 404 aa11.61□□□□□ -0.55
MCM3-201ENST00000229854 KRT9P35527 623 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms