RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 TMEM232C9JQI7 657 aa9.04□□□□□ -0.96
NANOG-201ENST00000229307 RGL2O15211 777 aa9.04□□□□□ -0.96
NANOG-201ENST00000229307 PPFIA3O75145 1194 aa9.04□□□□□ -0.96
NANOG-201ENST00000229307 CHRNA5P30532 468 aa9.04□□□□□ -0.96
NANOG-201ENST00000229307 CCT6AP40227 531 aaKnown RBP9.04□□□□□ -0.96
NANOG-201ENST00000229307 SSR1P43307 286 aaKnown RBP9.04□□□□□ -0.96
NANOG-201ENST00000229307 SPAG1Q07617 926 aa9.04□□□□□ -0.96
NANOG-201ENST00000229307 OTUD6AQ7L8S5 288 aa9.04□□□□□ -0.96
NANOG-201ENST00000229307 PNMA8AQ86V59 439 aaPredicted RBP9.04□□□□□ -0.96
NANOG-201ENST00000229307 TAF4BQ92750 862 aa9.04□□□□□ -0.96
NANOG-201ENST00000229307 TRIM47Q96LD4 638 aa9.04□□□□□ -0.96
NANOG-201ENST00000229307 RUFY1Q96T51 708 aa9.04□□□□□ -0.96
NANOG-201ENST00000229307 NBPF3Q9H094 633 aa9.04□□□□□ -0.96
NANOG-201ENST00000229307 GPBP1L1Q9HC44 474 aaPredicted RBP9.04□□□□□ -0.96
NANOG-201ENST00000229307 BRPF3Q9ULD4 1205 aa9.04□□□□□ -0.96
NANOG-201ENST00000229307 hCG_1984214I3L0E3 225 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 HSPD1P10809 573 aaKnown RBP9.03□□□□□ -0.96
NANOG-201ENST00000229307 ZNF713Q8N859 430 aaPredicted RBP9.03□□□□□ -0.96
NANOG-201ENST00000229307 IQUBQ8NA54 791 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 CELF1Q92879 486 aaKnown RBP9.03□□□□□ -0.96
NANOG-201ENST00000229307 AP5M1Q9H0R1 490 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 PKD2L1Q9P0L9 805 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 SNX14Q9Y5W7 946 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 BICDL2A1A5D9 508 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 CCNT1O60563 726 aaKnown RBP9.03□□□□□ -0.96
NANOG-201ENST00000229307 IGKV5-2P06315 115 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 MECOMQ03112 1051 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 STRN3Q13033 797 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 KIF4BQ2VIQ3 1234 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 SV2BQ7L1I2 683 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 TBC1D5Q92609 795 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 PANK2Q9BZ23 570 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 ARHGEF35A5YM69 484 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 F13A1P00488 732 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 RPL13P26373 211 aaKnown RBP9.03□□□□□ -0.96
NANOG-201ENST00000229307 POLA2Q14181 598 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 KIAA1328Q86T90 577 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 CNPY2Q9Y2B0 182 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 CAMTA1Q9Y6Y1 1673 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 NBPF26B4DH59 902 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 SASH1O94885 1247 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 ITPK1Q13572 414 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 IQCEQ6IPM2 695 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 NBPF10Q6P3W6 841 aaKnown RBP9.03□□□□□ -0.96
NANOG-201ENST00000229307 NBPF15Q8N660 670 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 PRKAG2Q9UGJ0 569 aa9.03□□□□□ -0.96
NANOG-201ENST00000229307 BMS1Q14692 1282 aaKnown RBP9.02□□□□□ -0.96
NANOG-201ENST00000229307 STRIP1Q5VSL9 837 aa9.02□□□□□ -0.96
NANOG-201ENST00000229307 TMEM179Q6ZVK1 233 aa9.02□□□□□ -0.96
NANOG-201ENST00000229307 LRRC47Q8N1G4 583 aaKnown RBP9.02□□□□□ -0.96
NANOG-201ENST00000229307 AMNQ9BXJ7 453 aa9.02□□□□□ -0.96
NANOG-201ENST00000229307 ARGLU1Q9NWB6 273 aaPredicted RBP9.02□□□□□ -0.96
NANOG-201ENST00000229307 YEATS4O95619 227 aa9.02□□□□□ -0.97
NANOG-201ENST00000229307 DPEP1P16444 411 aa9.02□□□□□ -0.97
NANOG-201ENST00000229307 RBM10P98175 930 aaKnown RBP9.02□□□□□ -0.97
NANOG-201ENST00000229307 GIMAP6Q6P9H5 292 aa9.02□□□□□ -0.97
NANOG-201ENST00000229307 PIK3AP1Q6ZUJ8 805 aa9.02□□□□□ -0.97
NANOG-201ENST00000229307 SKAP1Q86WV1 359 aa9.02□□□□□ -0.97
NANOG-201ENST00000229307 PSTPIP2Q9H939 334 aa9.02□□□□□ -0.97
NANOG-201ENST00000229307 TNKSO95271 1327 aa9.02□□□□□ -0.97
NANOG-201ENST00000229307 LMNB1P20700 586 aa9.02□□□□□ -0.97
NANOG-201ENST00000229307 COPB2P35606 906 aa9.02□□□□□ -0.97
NANOG-201ENST00000229307 MTX1Q13505 466 aa9.02□□□□□ -0.97
NANOG-201ENST00000229307 RASGRF1Q13972 1273 aa9.02□□□□□ -0.97
NANOG-201ENST00000229307 TAF12Q16514 161 aa9.02□□□□□ -0.97
NANOG-201ENST00000229307 ABCC12Q96J65 1359 aa9.02□□□□□ -0.97
NANOG-201ENST00000229307 SLIT3O75094 1523 aa9.02□□□□□ -0.97
NANOG-201ENST00000229307 KLRF2D3W0D1 207 aa9.02□□□□□ -0.97
NANOG-201ENST00000229307 BMP3P12645 472 aa9.02□□□□□ -0.97
NANOG-201ENST00000229307 FAM160B1Q5W0V3 765 aa9.02□□□□□ -0.97
NANOG-201ENST00000229307 FMNL3Q8IVF7 1028 aa9.02□□□□□ -0.97
NANOG-201ENST00000229307 GLG1Q92896 1179 aa9.02□□□□□ -0.97
NANOG-201ENST00000229307 ZNF274Q96GC6 653 aaPredicted RBP9.02□□□□□ -0.97
NANOG-201ENST00000229307 CTAGE1Q96RT6 745 aa9.02□□□□□ -0.97
NANOG-201ENST00000229307 SMCO2A6NFE2 343 aa9.01□□□□□ -0.97
NANOG-201ENST00000229307 CHMP2AO43633 222 aa9.01□□□□□ -0.97
NANOG-201ENST00000229307 HSPA4P34932 840 aa9.01□□□□□ -0.97
NANOG-201ENST00000229307 ERCC4Q92889 916 aaPredicted RBP9.01□□□□□ -0.97
NANOG-201ENST00000229307 MSANTD4Q8NCY6 345 aa9.01□□□□□ -0.97
NANOG-201ENST00000229307 TRIM6Q9C030 488 aaPredicted RBP9.01□□□□□ -0.97
NANOG-201ENST00000229307 FGAP02671 866 aa9.01□□□□□ -0.97
NANOG-201ENST00000229307 AFMP43652 599 aa9.01□□□□□ -0.97
NANOG-201ENST00000229307 TTC38Q5R3I4 469 aa9.01□□□□□ -0.97
NANOG-201ENST00000229307 SLFN12Q8IYM2 578 aa9.01□□□□□ -0.97
NANOG-201ENST00000229307 CDHR1Q96JP9 859 aa9.01□□□□□ -0.97
NANOG-201ENST00000229307 FERMT1Q9BQL6 677 aa9.01□□□□□ -0.97
NANOG-201ENST00000229307 FBXO40Q9UH90 709 aa9.01□□□□□ -0.97
NANOG-201ENST00000229307 PUF60Q9UHX1 559 aaKnown RBP9.01□□□□□ -0.97
NANOG-201ENST00000229307 USP17L5A8MUK1 530 aa9.01□□□□□ -0.97
NANOG-201ENST00000229307 USP8P40818 1118 aa9.01□□□□□ -0.97
NANOG-201ENST00000229307 CALCRLQ16602 461 aa9.01□□□□□ -0.97
NANOG-201ENST00000229307 NCAPH2Q6IBW4 605 aa9.01□□□□□ -0.97
NANOG-201ENST00000229307 RSPH3Q86UC2 560 aa9.01□□□□□ -0.97
NANOG-201ENST00000229307 TBC1D16Q8TBP0 767 aa9.01□□□□□ -0.97
NANOG-201ENST00000229307 DHX58Q96C10 678 aa9.01□□□□□ -0.97
NANOG-201ENST00000229307 EDC3Q96F86 508 aaKnown RBP9.01□□□□□ -0.97
NANOG-201ENST00000229307 MAP7D2Q96T17 732 aa9.01□□□□□ -0.97
NANOG-201ENST00000229307 GAS7O60861 476 aa9.01□□□□□ -0.97
NANOG-201ENST00000229307 STAT2P52630 851 aa9.01□□□□□ -0.97
NANOG-201ENST00000229307 ZNF174Q15697 407 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms