RNA–Protein interactions for RNA: ENST00000228140.6

RPS13-201, Transcript of ribosomal protein S13, humanhuman

TSL 2 BASIC

Gene RPS13, Length 491 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS13-201ENST00000228140 PLCD1P51178 756 aa12.61□□□□□ -0.39
RPS13-201ENST00000228140 GABPAQ06546 454 aa12.61□□□□□ -0.39
RPS13-201ENST00000228140 USP17L24Q0WX57 530 aa12.61□□□□□ -0.39
RPS13-201ENST00000228140 SHROOM1Q2M3G4 852 aaPredicted RBP12.61□□□□□ -0.39
RPS13-201ENST00000228140 LRRFIP1Q32MZ4 808 aaKnown RBP12.61□□□□□ -0.39
RPS13-201ENST00000228140 SOCS4Q8WXH5 440 aa12.61□□□□□ -0.39
RPS13-201ENST00000228140 EDC3Q96F86 508 aaKnown RBP12.61□□□□□ -0.39
RPS13-201ENST00000228140 P2RX7Q99572 595 aaKnown RBP12.61□□□□□ -0.39
RPS13-201ENST00000228140 HTATIP2Q9BUP3 242 aa12.61□□□□□ -0.39
RPS13-201ENST00000228140 SH2D4AQ9H788 454 aa12.61□□□□□ -0.39
RPS13-201ENST00000228140 EMILIN3Q9NT22 766 aa12.61□□□□□ -0.39
RPS13-201ENST00000228140 MPHOSPH10O00566 681 aaKnown RBP12.6□□□□□ -0.39
RPS13-201ENST00000228140 SMARCA5O60264 1052 aaPredicted RBP12.6□□□□□ -0.39
RPS13-201ENST00000228140 GLRX3O76003 335 aaKnown RBP12.6□□□□□ -0.39
RPS13-201ENST00000228140 SLC34A2O95436 690 aa12.6□□□□□ -0.39
RPS13-201ENST00000228140 HMGCRP04035 888 aa12.6□□□□□ -0.39
RPS13-201ENST00000228140 ERVK-9P63128 1117 aa12.6□□□□□ -0.39
RPS13-201ENST00000228140 ERVK-24P63145 666 aa12.6□□□□□ -0.39
RPS13-201ENST00000228140 CCNA1P78396 465 aa12.6□□□□□ -0.39
RPS13-201ENST00000228140 ZYXQ15942 572 aaKnown RBP12.6□□□□□ -0.39
RPS13-201ENST00000228140 TMEM179Q6ZVK1 233 aa12.6□□□□□ -0.39
RPS13-201ENST00000228140 TRMT44Q8IYL2 757 aaKnown RBP12.6□□□□□ -0.39
RPS13-201ENST00000228140 U2AF1L4Q8WU68 220 aaKnown RBP12.6□□□□□ -0.39
RPS13-201ENST00000228140 SHISA4Q96DD7 197 aa12.6□□□□□ -0.39
RPS13-201ENST00000228140 UNC93B1Q9H1C4 597 aa12.6□□□□□ -0.39
RPS13-201ENST00000228140 CWC22Q9HCG8 908 aaKnown RBP12.6□□□□□ -0.39
RPS13-201ENST00000228140 SGPL1O95470 568 aa12.59□□□□□ -0.39
RPS13-201ENST00000228140 ZFYP08048 801 aaPredicted RBP12.59□□□□□ -0.39
RPS13-201ENST00000228140 VCAM1P19320 739 aa12.59□□□□□ -0.39
RPS13-201ENST00000228140 CCDC17Q96LX7 622 aa12.59□□□□□ -0.39
RPS13-201ENST00000228140 NUDT12Q9BQG2 462 aa12.59□□□□□ -0.39
RPS13-201ENST00000228140 PAGR1Q9BTK6 254 aa12.59□□□□□ -0.39
RPS13-201ENST00000228140 ARHGEF10LQ9HCE6 1279 aa12.59□□□□□ -0.39
RPS13-201ENST00000228140 ARPP21Q9UBL0 812 aaPredicted RBP12.59□□□□□ -0.39
RPS13-201ENST00000228140 ZBTB47Q9UFB7 747 aaPredicted RBP12.59□□□□□ -0.39
RPS13-201ENST00000228140 RABGAP1Q9Y3P9 1069 aa12.59□□□□□ -0.39
RPS13-201ENST00000228140 SLC4A4Q9Y6R1 1079 aa12.59□□□□□ -0.39
RPS13-201ENST00000228140 ZNF236Q9UL36 1845 aa12.59□□□□□ -0.39
RPS13-201ENST00000228140 TTC41PQ6P2S7 1318 aa12.59□□□□□ -0.39
RPS13-201ENST00000228140 GREB1LQ9C091 1923 aaPredicted RBP12.58□□□□□ -0.39
RPS13-201ENST00000228140 FRMPD3Q5JV73 1810 aa12.58□□□□□ -0.4
RPS13-201ENST00000228140 ERC2O15083 957 aa12.58□□□□□ -0.4
RPS13-201ENST00000228140 FARP2O94887 1054 aaPredicted RBP12.58□□□□□ -0.4
RPS13-201ENST00000228140 XRCC5P13010 732 aaKnown RBP12.58□□□□□ -0.4
RPS13-201ENST00000228140 RRP1P56182 461 aaKnown RBP12.58□□□□□ -0.4
RPS13-201ENST00000228140 SEPT2Q15019 361 aa12.58□□□□□ -0.4
RPS13-201ENST00000228140 LBX2Q6XYB7 198 aa12.58□□□□□ -0.4
RPS13-201ENST00000228140 CATSPERGQ6ZRH7 1159 aa12.58□□□□□ -0.4
RPS13-201ENST00000228140 KBTBD3Q8NAB2 608 aa12.58□□□□□ -0.4
RPS13-201ENST00000228140 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.58□□□□□ -0.41e-9■■■■□ 20
RPS13-201ENST00000228140 TXNRD2Q9NNW7 524 aa12.58□□□□□ -0.4
RPS13-201ENST00000228140 PAK6Q9NQU5 681 aaPredicted RBP12.58□□□□□ -0.4
RPS13-201ENST00000228140 RBPJLQ9UBG7 517 aa12.58□□□□□ -0.4
RPS13-201ENST00000228140 GJD2Q9UKL4 321 aa12.58□□□□□ -0.4
RPS13-201ENST00000228140 BRCA2P51587 3418 aa12.58□□□□□ -0.4
RPS13-201ENST00000228140 RLFQ13129 1914 aa12.58□□□□□ -0.4
RPS13-201ENST00000228140 MYH4Q9Y623 1939 aa12.58□□□□□ -0.4
RPS13-201ENST00000228140 PRKAB2O43741 272 aa12.57□□□□□ -0.4
RPS13-201ENST00000228140 TFRCP02786 760 aaKnown RBP12.57□□□□□ -0.4
RPS13-201ENST00000228140 RGS2P41220 211 aa12.57□□□□□ -0.4
RPS13-201ENST00000228140 C12orf60Q5U649 245 aa12.57□□□□□ -0.4
RPS13-201ENST00000228140 GIMAP6Q6P9H5 292 aa12.57□□□□□ -0.4
RPS13-201ENST00000228140 GPR142Q7Z601 462 aa12.57□□□□□ -0.4
RPS13-201ENST00000228140 PLEKHH3Q7Z736 793 aa12.57□□□□□ -0.4
RPS13-201ENST00000228140 ANKLE1Q8NAG6 615 aa12.57□□□□□ -0.4
RPS13-201ENST00000228140 ACER1Q8TDN7 264 aa12.57□□□□□ -0.4
RPS13-201ENST00000228140 APPBP2Q92624 585 aa12.57□□□□□ -0.4
RPS13-201ENST00000228140 LPAR1Q92633 364 aa12.57□□□□□ -0.4
RPS13-201ENST00000228140 RPAP3Q9H6T3 665 aaPredicted RBP12.57□□□□□ -0.4
RPS13-201ENST00000228140 HMX1Q9NP08 348 aaPredicted RBP12.57□□□□□ -0.4
RPS13-201ENST00000228140 COL11A1P12107 1806 aaPredicted RBP12.57□□□□□ -0.4
RPS13-201ENST00000228140 RPTORQ8N122 1335 aa12.57□□□□□ -0.4
RPS13-201ENST00000228140 USP17L12C9JPN9 530 aa12.56□□□□□ -0.4
RPS13-201ENST00000228140 USP17L21D6R901 530 aa12.56□□□□□ -0.4
RPS13-201ENST00000228140 CYP2D6P10635 497 aa12.56□□□□□ -0.4
RPS13-201ENST00000228140 ZKSCAN1P17029 563 aaPredicted RBP12.56□□□□□ -0.4
RPS13-201ENST00000228140 GNAT2P19087 354 aa12.56□□□□□ -0.4
RPS13-201ENST00000228140 CYP2B6P20813 491 aa12.56□□□□□ -0.4
RPS13-201ENST00000228140 GUCY1A2P33402 732 aa12.56□□□□□ -0.4
RPS13-201ENST00000228140 ICA1Q05084 483 aa12.56□□□□□ -0.4
RPS13-201ENST00000228140 C16orf86Q6ZW13 317 aa12.56□□□□□ -0.4
RPS13-201ENST00000228140 SLC44A5Q8NCS7 719 aa12.56□□□□□ -0.4
RPS13-201ENST00000228140 DEFB118Q96PH6 123 aa12.56□□□□□ -0.4
RPS13-201ENST00000228140 APBA2Q99767 749 aa12.56□□□□□ -0.4
RPS13-201ENST00000228140 TANGO6Q9C0B7 1094 aa12.56□□□□□ -0.4
RPS13-201ENST00000228140 PUS7LQ9H0K6 701 aaKnown RBP12.56□□□□□ -0.4
RPS13-201ENST00000228140 HOXC10Q9NYD6 342 aa12.56□□□□□ -0.4
RPS13-201ENST00000228140 IVNS1ABPQ9Y6Y0 642 aa12.56□□□□□ -0.4
RPS13-201ENST00000228140 SPDYE16A6NNV3 312 aaPredicted RBP12.55□□□□□ -0.4
RPS13-201ENST00000228140 RNF113AO15541 343 aaKnown RBP12.55□□□□□ -0.4
RPS13-201ENST00000228140 CDK8P49336 464 aa12.55□□□□□ -0.4
RPS13-201ENST00000228140 COG2Q14746 738 aa12.55□□□□□ -0.4
RPS13-201ENST00000228140 WDR78Q5VTH9 848 aa12.55□□□□□ -0.4
RPS13-201ENST00000228140 UBE2Q1Q7Z7E8 422 aa12.55□□□□□ -0.4
RPS13-201ENST00000228140 MB21D1Q8N884 522 aa12.55□□□□□ -0.4
RPS13-201ENST00000228140 TRIB2Q92519 343 aa12.55□□□□□ -0.4
RPS13-201ENST00000228140 DPF3Q92784 378 aa12.55□□□□□ -0.4
RPS13-201ENST00000228140 DYNLL2Q96FJ2 89 aa12.55□□□□□ -0.4
RPS13-201ENST00000228140 ZNF287Q9HBT7 754 aa12.55□□□□□ -0.4
RPS13-201ENST00000228140 TMX2Q9Y320 296 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms