RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 INF2Q27J81 1249 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 TOGARAM2Q6ZUX3 1019 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 RRAGAQ7L523 313 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 PRM3Q9NNZ6 103 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 SEC31BQ9NQW1 1179 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 POLR1AO95602 1720 aaPredicted RBP15.4■□□□□ 0.06
NFKB1-201ENST00000226574 CDC25BP30305 580 aa15.4■□□□□ 0.06
NFKB1-201ENST00000226574 MTF1Q14872 753 aa15.4■□□□□ 0.06
NFKB1-201ENST00000226574 KCTD16Q68DU8 428 aa15.4■□□□□ 0.06
NFKB1-201ENST00000226574 C8orf74Q6P047 294 aa15.4■□□□□ 0.06
NFKB1-201ENST00000226574 OPA1O60313 960 aa15.4■□□□□ 0.06
NFKB1-201ENST00000226574 KCNQ4P56696 695 aa15.4■□□□□ 0.06
NFKB1-201ENST00000226574 NCAPH2Q6IBW4 605 aa15.4■□□□□ 0.06
NFKB1-201ENST00000226574 CCDC25Q86WR0 208 aa15.4■□□□□ 0.06
NFKB1-201ENST00000226574 SYCP3Q8IZU3 236 aa15.4■□□□□ 0.06
NFKB1-201ENST00000226574 RPGRQ92834 1020 aaKnown RBP15.4■□□□□ 0.06
NFKB1-201ENST00000226574 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.4■□□□□ 0.06
NFKB1-201ENST00000226574 IQSEC2Q5JU85 1478 aa15.4■□□□□ 0.06
NFKB1-201ENST00000226574 PCDH11XQ9BZA7 1347 aa15.4■□□□□ 0.06
NFKB1-201ENST00000226574 PCDH11YQ9BZA8 1340 aa15.4■□□□□ 0.06
NFKB1-201ENST00000226574 BUB1O43683 1085 aa15.4■□□□□ 0.06
NFKB1-201ENST00000226574 CALM1P0DP23 149 aa15.4■□□□□ 0.06
NFKB1-201ENST00000226574 CALM2P0DP24 149 aa15.4■□□□□ 0.06
NFKB1-201ENST00000226574 CALM3P0DP25 149 aa15.4■□□□□ 0.06
NFKB1-201ENST00000226574 KRT13P13646 458 aa15.4■□□□□ 0.06
NFKB1-201ENST00000226574 MORC3Q14149 939 aa15.4■□□□□ 0.06
NFKB1-201ENST00000226574 SETDB2Q96T68 719 aa15.4■□□□□ 0.06
NFKB1-201ENST00000226574 C6orf50Q9HD87 102 aa15.4■□□□□ 0.06
NFKB1-201ENST00000226574 EPN1Q9Y6I3 576 aaPredicted RBP15.4■□□□□ 0.06
NFKB1-201ENST00000226574 COL9A3Q14050 684 aaPredicted RBP15.39■□□□□ 0.05
NFKB1-201ENST00000226574 DHX40Q8IX18 779 aaKnown RBP15.39■□□□□ 0.05
NFKB1-201ENST00000226574 CDC42BPBQ9Y5S2 1711 aa15.39■□□□□ 0.05
NFKB1-201ENST00000226574 KIF28PB7ZC32 967 aa15.39■□□□□ 0.05
NFKB1-201ENST00000226574 PDE8BO95263 885 aa15.39■□□□□ 0.05
NFKB1-201ENST00000226574 LIG3P49916 1009 aa15.39■□□□□ 0.05
NFKB1-201ENST00000226574 KIAA0753Q2KHM9 967 aa15.39■□□□□ 0.05
NFKB1-201ENST00000226574 SPATA1Q5VX52 437 aa15.39■□□□□ 0.05
NFKB1-201ENST00000226574 E4F1Q66K89 784 aaPredicted RBP15.39■□□□□ 0.05
NFKB1-201ENST00000226574 SECISBP2LQ93073 1101 aaKnown RBP15.39■□□□□ 0.05
NFKB1-201ENST00000226574 CDC23Q9UJX2 597 aa15.39■□□□□ 0.05
NFKB1-201ENST00000226574 EFCAB6Q5THR3 1501 aa15.39■□□□□ 0.05
NFKB1-201ENST00000226574 LDHCP07864 332 aa15.39■□□□□ 0.05
NFKB1-201ENST00000226574 MICALCLQ6ZW33 695 aa15.39■□□□□ 0.05
NFKB1-201ENST00000226574 VSTM4Q8IW00 320 aa15.39■□□□□ 0.05
NFKB1-201ENST00000226574 E9PCH4 1651 aa15.39■□□□□ 0.05
NFKB1-201ENST00000226574 GNAQP50148 359 aa15.38■□□□□ 0.05
NFKB1-201ENST00000226574 CTSWP56202 376 aa15.38■□□□□ 0.05
NFKB1-201ENST00000226574 KSR1Q8IVT5 923 aa15.38■□□□□ 0.05
NFKB1-201ENST00000226574 UBLCP1Q8WVY7 318 aaPredicted RBP15.38■□□□□ 0.05
NFKB1-201ENST00000226574 PPP1R1BQ9UD71 204 aaPredicted RBP15.38■□□□□ 0.05
NFKB1-201ENST00000226574 SAMM50Q9Y512 469 aa15.38■□□□□ 0.05
NFKB1-201ENST00000226574 CPLX4Q7Z7G2 160 aa15.38■□□□□ 0.05
NFKB1-201ENST00000226574 PAIP2Q9BPZ3 127 aaKnown RBP15.38■□□□□ 0.05
NFKB1-201ENST00000226574 SELENOSQ9BQE4 189 aa15.38■□□□□ 0.05
NFKB1-201ENST00000226574 BICDL2A1A5D9 508 aa15.38■□□□□ 0.05
NFKB1-201ENST00000226574 TEX33O43247 280 aa15.38■□□□□ 0.05
NFKB1-201ENST00000226574 ARID4AP29374 1257 aaPredicted RBP15.38■□□□□ 0.05
NFKB1-201ENST00000226574 SRGAP1Q7Z6B7 1085 aa15.38■□□□□ 0.05
NFKB1-201ENST00000226574 SCLT1Q96NL6 688 aa15.38■□□□□ 0.05
NFKB1-201ENST00000226574 WDR24Q96S15 920 aa15.38■□□□□ 0.05
NFKB1-201ENST00000226574 IFIH1Q9BYX4 1025 aaKnown RBP15.38■□□□□ 0.05
NFKB1-201ENST00000226574 RIMBP2O15034 1052 aa15.38■□□□□ 0.05
NFKB1-201ENST00000226574 PLCD1P51178 756 aa15.38■□□□□ 0.05
NFKB1-201ENST00000226574 MAPKAPK5Q8IW41 473 aa15.38■□□□□ 0.05
NFKB1-201ENST00000226574 RABGGTAQ92696 567 aa15.38■□□□□ 0.05
NFKB1-201ENST00000226574 SLC39A2Q9NP94 309 aa15.38■□□□□ 0.05
NFKB1-201ENST00000226574 PIH1D3Q9NQM4 214 aaKnown RBP15.38■□□□□ 0.05
NFKB1-201ENST00000226574 IKBKBO14920 756 aa15.37■□□□□ 0.05
NFKB1-201ENST00000226574 GLI2P10070 1586 aa15.37■□□□□ 0.05
NFKB1-201ENST00000226574 CDC27P30260 824 aa15.37■□□□□ 0.05
NFKB1-201ENST00000226574 DYNLL1P63167 89 aaKnown RBP15.37■□□□□ 0.05
NFKB1-201ENST00000226574 DDB1Q16531 1140 aa15.37■□□□□ 0.05
NFKB1-201ENST00000226574 SV2BQ7L1I2 683 aa15.37■□□□□ 0.05
NFKB1-201ENST00000226574 CCDC114Q96M63 670 aa15.37■□□□□ 0.05
NFKB1-201ENST00000226574 FAM204AQ9H8W3 233 aa15.37■□□□□ 0.05
NFKB1-201ENST00000226574 CYP27B1O15528 508 aa15.37■□□□□ 0.05
NFKB1-201ENST00000226574 SARM1Q6SZW1 724 aa15.37■□□□□ 0.05
NFKB1-201ENST00000226574 CYB5R4Q7L1T6 521 aa15.37■□□□□ 0.05
NFKB1-201ENST00000226574 RNF17Q9BXT8 1623 aaKnown RBP15.37■□□□□ 0.05
NFKB1-201ENST00000226574 UNC13BO14795 1591 aa15.37■□□□□ 0.05
NFKB1-201ENST00000226574 CRB1P82279 1406 aa15.37■□□□□ 0.05
NFKB1-201ENST00000226574 GJC1P36383 396 aa15.37■□□□□ 0.05
NFKB1-201ENST00000226574 TECP42680 631 aa15.37■□□□□ 0.05
NFKB1-201ENST00000226574 MCAMP43121 646 aa15.37■□□□□ 0.05
NFKB1-201ENST00000226574 BRD3Q15059 726 aa15.37■□□□□ 0.05
NFKB1-201ENST00000226574 TBC1D10CQ8IV04 446 aa15.37■□□□□ 0.05
NFKB1-201ENST00000226574 DENND2AQ9ULE3 1009 aa15.37■□□□□ 0.05
NFKB1-201ENST00000226574 ZBTB1Q9Y2K1 713 aa15.37■□□□□ 0.05
NFKB1-201ENST00000226574 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.37■□□□□ 0.05
NFKB1-201ENST00000226574 LDHBP07195 334 aaKnown RBP15.36■□□□□ 0.05
NFKB1-201ENST00000226574 LCORLQ8N3X6 602 aa15.36■□□□□ 0.05
NFKB1-201ENST00000226574 ZBTB38Q8NAP3 1195 aaPredicted RBP15.36■□□□□ 0.05
NFKB1-201ENST00000226574 OXER1Q8TDS5 423 aa15.36■□□□□ 0.05
NFKB1-201ENST00000226574 RRP36Q96EU6 259 aaKnown RBP15.36■□□□□ 0.05
NFKB1-201ENST00000226574 TET3O43151 1660 aa15.36■□□□□ 0.05
NFKB1-201ENST00000226574 SRGAP2O75044 1071 aa15.36■□□□□ 0.05
NFKB1-201ENST00000226574 TBCAO75347 108 aaKnown RBP15.36■□□□□ 0.05
NFKB1-201ENST00000226574 CCZ1BP86790 482 aa15.36■□□□□ 0.05
NFKB1-201ENST00000226574 CCZ1P86791 482 aaPredicted RBP15.36■□□□□ 0.05
NFKB1-201ENST00000226574 BCAS4Q8TDM0 211 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms