RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 ACBD3Q9H3P7 528 aa16.21■□□□□ 0.19
SFXN3-201ENST00000224807 DUSP10Q9Y6W6 482 aa16.21■□□□□ 0.19
SFXN3-201ENST00000224807 TRIM49BA6NDI0 452 aa16.21■□□□□ 0.19
SFXN3-201ENST00000224807 NAP1L1P55209 391 aaKnown RBP16.21■□□□□ 0.19
SFXN3-201ENST00000224807 STIM1Q13586 685 aa16.21■□□□□ 0.19
SFXN3-201ENST00000224807 RABL6Q3YEC7 729 aaPredicted RBP16.21■□□□□ 0.19
SFXN3-201ENST00000224807 LDHAL6AQ6ZMR3 332 aa16.21■□□□□ 0.19
SFXN3-201ENST00000224807 TOM1L2Q6ZVM7 507 aa16.21■□□□□ 0.19
SFXN3-201ENST00000224807 ANKRD13CQ8N6S4 541 aa16.21■□□□□ 0.19
SFXN3-201ENST00000224807 EHD2Q9NZN4 543 aa16.21■□□□□ 0.19
SFXN3-201ENST00000224807 ZSWIM5Q9P217 1185 aa16.21■□□□□ 0.19
SFXN3-201ENST00000224807 WWC3Q9ULE0 1092 aa16.21■□□□□ 0.19
SFXN3-201ENST00000224807 ZMYM6O95789 1325 aa16.21■□□□□ 0.19
SFXN3-201ENST00000224807 ZNF532Q9HCE3 1301 aa16.21■□□□□ 0.19
SFXN3-201ENST00000224807 PPP6R2O75170 966 aa16.2■□□□□ 0.18
SFXN3-201ENST00000224807 DPYDQ12882 1025 aa16.2■□□□□ 0.18
SFXN3-201ENST00000224807 EZH2Q15910 746 aaKnown RBP16.2■□□□□ 0.18
SFXN3-201ENST00000224807 EP400NLQ6ZTU2 488 aa16.2■□□□□ 0.18
SFXN3-201ENST00000224807 SND1Q7KZF4 910 aaKnown RBP eCLIP16.2■□□□□ 0.18
SFXN3-201ENST00000224807 KCNH5Q8NCM2 988 aa16.2■□□□□ 0.18
SFXN3-201ENST00000224807 ENOX1Q8TC92 643 aaKnown RBP16.2■□□□□ 0.18
SFXN3-201ENST00000224807 BCAS4Q8TDM0 211 aa16.2■□□□□ 0.18
SFXN3-201ENST00000224807 TATP17735 454 aaPredicted RBP16.2■□□□□ 0.18
SFXN3-201ENST00000224807 PTPROQ16827 1216 aa16.2■□□□□ 0.18
SFXN3-201ENST00000224807 SYMPKQ92797 1274 aaKnown RBP16.2■□□□□ 0.18
SFXN3-201ENST00000224807 SSBP05455 408 aaKnown RBP eCLIP16.2■□□□□ 0.18
SFXN3-201ENST00000224807 PLCD1P51178 756 aa16.2■□□□□ 0.18
SFXN3-201ENST00000224807 ATP2B2Q01814 1243 aa16.2■□□□□ 0.18
SFXN3-201ENST00000224807 TSR1Q2NL82 804 aaKnown RBP16.2■□□□□ 0.18
SFXN3-201ENST00000224807 NBPF3Q9H094 633 aa16.2■□□□□ 0.18
SFXN3-201ENST00000224807 EFCC1Q9HA90 598 aa16.2■□□□□ 0.18
SFXN3-201ENST00000224807 ECM2O94769 699 aaPredicted RBP16.19■□□□□ 0.18
SFXN3-201ENST00000224807 ZNF18P17022 549 aa16.19■□□□□ 0.18
SFXN3-201ENST00000224807 FAM71BQ8TC56 605 aa16.19■□□□□ 0.18
SFXN3-201ENST00000224807 KAT14Q9H8E8 782 aa16.19■□□□□ 0.18
SFXN3-201ENST00000224807 GOLGA6CA6NDK9 693 aa16.19■□□□□ 0.18
SFXN3-201ENST00000224807 WNT7AO00755 349 aa16.19■□□□□ 0.18
SFXN3-201ENST00000224807 SH2B2O14492 632 aaPredicted RBP16.19■□□□□ 0.18
SFXN3-201ENST00000224807 GOLGA6DP0CG33 693 aa16.19■□□□□ 0.18
SFXN3-201ENST00000224807 MCAMP43121 646 aa16.19■□□□□ 0.18
SFXN3-201ENST00000224807 KRT31Q15323 416 aa16.19■□□□□ 0.18
SFXN3-201ENST00000224807 RTN1Q16799 776 aa16.19■□□□□ 0.18
SFXN3-201ENST00000224807 MAP9Q49MG5 647 aa16.19■□□□□ 0.18
SFXN3-201ENST00000224807 EARS2Q5JPH6 523 aaKnown RBP16.19■□□□□ 0.18
SFXN3-201ENST00000224807 PPM1EQ8WY54 764 aa16.19■□□□□ 0.18
SFXN3-201ENST00000224807 GOLGA6AQ9NYA3 693 aa16.19■□□□□ 0.18
SFXN3-201ENST00000224807 GDAQ9Y2T3 454 aa16.19■□□□□ 0.18
SFXN3-201ENST00000224807 NBPF26B4DH59 902 aa16.18■□□□□ 0.18
SFXN3-201ENST00000224807 EIF5P55010 431 aaKnown RBP16.18■□□□□ 0.18
SFXN3-201ENST00000224807 MORC3Q14149 939 aa16.18■□□□□ 0.18
SFXN3-201ENST00000224807 NBPF14Q5TI25 921 aa16.18■□□□□ 0.18
SFXN3-201ENST00000224807 NBPF10Q6P3W6 841 aaKnown RBP16.18■□□□□ 0.18
SFXN3-201ENST00000224807 LRP10Q7Z4F1 713 aa16.18■□□□□ 0.18
SFXN3-201ENST00000224807 SH2D3CQ8N5H7 860 aa16.18■□□□□ 0.18
SFXN3-201ENST00000224807 NBPF15Q8N660 670 aa16.18■□□□□ 0.18
SFXN3-201ENST00000224807 RRP36Q96EU6 259 aaKnown RBP16.18■□□□□ 0.18
SFXN3-201ENST00000224807 PLEKHG2Q9H7P9 1386 aa16.18■□□□□ 0.18
SFXN3-201ENST00000224807 PHRF1Q9P1Y6 1649 aaKnown RBP16.18■□□□□ 0.18
SFXN3-201ENST00000224807 ERLIN2O94905 339 aa16.18■□□□□ 0.18
SFXN3-201ENST00000224807 MBD4O95243 580 aa16.18■□□□□ 0.18
SFXN3-201ENST00000224807 PIP4K2BP78356 416 aa16.18■□□□□ 0.18
SFXN3-201ENST00000224807 RNF187Q5TA31 235 aaPredicted RBP16.18■□□□□ 0.18
SFXN3-201ENST00000224807 GBP3Q9H0R5 595 aa16.18■□□□□ 0.18
SFXN3-201ENST00000224807 PIH1D3Q9NQM4 214 aaKnown RBP16.18■□□□□ 0.18
SFXN3-201ENST00000224807 FBXO2Q9UK22 296 aaPredicted RBP16.18■□□□□ 0.18
SFXN3-201ENST00000224807 TULP1O00294 542 aaPredicted RBP16.17■□□□□ 0.18
SFXN3-201ENST00000224807 MCM7P33993 719 aa16.17■□□□□ 0.18
SFXN3-201ENST00000224807 GNGT1P63211 74 aa16.17■□□□□ 0.18
SFXN3-201ENST00000224807 MAGEB6Q8N7X4 407 aa16.17■□□□□ 0.18
SFXN3-201ENST00000224807 A0A1B0GTH6 734 aa16.17■□□□□ 0.18
SFXN3-201ENST00000224807 ERICH2A1L162 156 aa16.17■□□□□ 0.18
SFXN3-201ENST00000224807 ARHGEF25Q86VW2 580 aa16.17■□□□□ 0.18
SFXN3-201ENST00000224807 HDAC7Q8WUI4 952 aa16.17■□□□□ 0.18
SFXN3-201ENST00000224807 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.17■□□□□ 0.18
SFXN3-201ENST00000224807 IFIT5Q13325 482 aaKnown RBP16.17■□□□□ 0.18
SFXN3-201ENST00000224807 SPATA1Q5VX52 437 aa16.17■□□□□ 0.18
SFXN3-201ENST00000224807 CNGA4Q8IV77 575 aa16.17■□□□□ 0.18
SFXN3-201ENST00000224807 FAM76AQ8TAV0 307 aa16.17■□□□□ 0.18
SFXN3-201ENST00000224807 RUFY1Q96T51 708 aa16.17■□□□□ 0.18
SFXN3-201ENST00000224807 KAT6BQ8WYB5 2073 aa16.16■□□□□ 0.18
SFXN3-201ENST00000224807 EBAG9O00559 213 aa16.16■□□□□ 0.18
SFXN3-201ENST00000224807 IDEP14735 1019 aa16.16■□□□□ 0.18
SFXN3-201ENST00000224807 PHKA1P46020 1223 aa16.16■□□□□ 0.18
SFXN3-201ENST00000224807 KLK7P49862 253 aa16.16■□□□□ 0.18
SFXN3-201ENST00000224807 MDM2Q00987 491 aaPredicted RBP16.16■□□□□ 0.18
SFXN3-201ENST00000224807 PDCLQ13371 301 aa16.16■□□□□ 0.18
SFXN3-201ENST00000224807 PLBD2Q8NHP8 589 aa16.16■□□□□ 0.18
SFXN3-201ENST00000224807 ABHD10Q9NUJ1 306 aa16.16■□□□□ 0.18
SFXN3-201ENST00000224807 ADD3Q9UEY8 706 aaKnown RBP16.16■□□□□ 0.18
SFXN3-201ENST00000224807 EPN1Q9Y6I3 576 aaPredicted RBP16.16■□□□□ 0.18
SFXN3-201ENST00000224807 GOLGA6BA6NDN3 693 aa16.16■□□□□ 0.18
SFXN3-201ENST00000224807 POTEB2H3BUK9 544 aa16.16■□□□□ 0.18
SFXN3-201ENST00000224807 BACH1O14867 736 aa16.16■□□□□ 0.18
SFXN3-201ENST00000224807 KRT26Q7Z3Y9 468 aa16.16■□□□□ 0.18
SFXN3-201ENST00000224807 FAM212AQ96EL1 285 aa16.16■□□□□ 0.18
SFXN3-201ENST00000224807 ABCF2Q9UG63 623 aa16.16■□□□□ 0.18
SFXN3-201ENST00000224807 V9GY48 417 aaPredicted RBP16.16■□□□□ 0.18
SFXN3-201ENST00000224807 AFDNP55196 1824 aaKnown RBP16.16■□□□□ 0.18
SFXN3-201ENST00000224807 IPO7O95373 1038 aaKnown RBP16.15■□□□□ 0.18
SFXN3-201ENST00000224807 SYF2O95926 243 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms